Sequence Description Alias PCC hrr AMTR_s00002p00179800 Pentatricopeptide repeat-containing protein At4g17616 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.155 0.9095337893912322 7 AMTR_s00038p00191060 Outer envelope protein 64, mitochondrial OS=Arabidopsis thaliana TOC64-V, ATTOC64-V, MTOM64, AtmtOM64, OM64, evm_27.TU.AmTr_v1.0_scaffold00038.134 0.907821989568856 4 AMTR_s00011p00177280 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group ATIPK1, IPK1, evm_27.TU.AmTr_v1.0_scaffold00011.51 0.9071413382336576 6 AMTR_s00033p00153180 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase BRIZ2, evm_27.TU.AmTr_v1.0_scaffold00033.98 0.9054771626421804 4 AMTR_s00002p00244460 RNA biosynthesis.siRNA biogenesis.CLSY3/4 regulator protein DMS1, DRD1, CHR35, evm_27.TU.AmTr_v1.0_scaffold00002.323 0.9011342538148107 5 AMTR_s00030p00182140 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase ATHDA8, HDA8, HDA08, evm_27.TU.AmTr_v1.0_scaffold00030.113 0.8974768654605118 16 AMTR_s00001p00258300 Protein modification.phosphorylation.CMGC kinase superfamily.MAPK kinase ATMPK13, evm_27.TU.AmTr_v1.0_scaffold00001.357 0.8972969804150506 7 AMTR_s00025p00247440 evm_27.TU.AmTr_v1.0_scaffold00025.398 0.8910162485209587 8 AMTR_s00036p00239350 evm_27.TU.AmTr_v1.0_scaffold00036.191 0.8874095878224797 18 AMTR_s00078p00125860 Translation factor GUF1 homolog, mitochondrial OS=Ricinus communis evm_27.TU.AmTr_v1.0_scaffold00078.102 0.8862580343115245 57 AMTR_s00093p00102680 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS26c component evm_27.TU.AmTr_v1.0_scaffold00093.33 0.8855800243107425 25 AMTR_s00071p00197740 evm_27.TU.AmTr_v1.0_scaffold00071.213 0.88447120248325 12 AMTR_s00049p00094540 Probable ubiquitin-like-specific protease 2B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.64 0.8833996588975231 21 AMTR_s00071p00094030 MEE21, evm_27.TU.AmTr_v1.0_scaffold00071.69 0.8819400044841121 32 AMTR_s00001p00272400 Protein translocation.mitochondrion.inner mitochondrion membrane TIM translocation system.Tim50 component emb1860, TIM50, evm_27.TU.AmTr_v1.0_scaffold00001.524 0.8796611797194861 21 AMTR_s00009p00171900 Protein KINESIN LIGHT CHAIN-RELATED 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.101 0.8749621901587902 18 AMTR_s00066p00127210 Solute transport.porins.OEP37 outer membrane porin OEP37, ATOEP37, evm_27.TU.AmTr_v1.0_scaffold00066.120 0.8742425791948087 28 AMTR_s00048p00147550 Solute transport.carrier-mediated transport.MFS superfamily.SP family.hexose transporter (VGT-type) evm_27.TU.AmTr_v1.0_scaffold00048.97 0.8704283860472154 20 AMTR_s00142p00088550 PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00142.57 0.8703738490731628 21 AMTR_s00001p00176140 Protein translocation.endoplasmic reticulum.GET post-translational insertion system.GET4-GET5 scaffold subcomplex.GET4 GET3-recruitment component evm_27.TU.AmTr_v1.0_scaffold00001.168 0.868546312657254 22 AMTR_s00038p00142520 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol kinase ATCDPMEK, CDPMEK, PDE277, ISPE, evm_27.TU.AmTr_v1.0_scaffold00038.87 0.8683982278785378 23 AMTR_s00040p00044580 evm_27.TU.AmTr_v1.0_scaffold00040.21 0.8679385147313156 54 AMTR_s00007p00203740 Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana EMB2453, ATPPR5, evm_27.TU.AmTr_v1.0_scaffold00007.179 0.8661066732022547 28 AMTR_s00003p00264590 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL/KDM1 lysine-specific demethylase LDL2, evm_27.TU.AmTr_v1.0_scaffold00003.362 0.8644700077830147 26 AMTR_s00138p00017550 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.MON1-CCZ1 RAB7 guanine nucleotide exchange factor complex.CCZ1 component evm_27.TU.AmTr_v1.0_scaffold00138.3 0.8624842785296741 56 AMTR_s00137p00039300 Cell cycle.mitosis and meiosis.chromosome segregation.centromere assembly and maintenance.KNL2/Mis18 CENH3 recruitment factor evm_27.TU.AmTr_v1.0_scaffold00137.13 0.8600656338854242 66 AMTR_s00021p00112470 Vesicle trafficking.autophagosome formation.cargo recruitment.ATI3 autophagic adapter protein evm_27.TU.AmTr_v1.0_scaffold00021.60 0.8593707959564596 54 AMTR_s00038p00190470 Outer envelope protein 64, mitochondrial OS=Arabidopsis thaliana TOC64-V, ATTOC64-V, MTOM64, AtmtOM64, OM64, evm_27.TU.AmTr_v1.0_scaffold00038.133 0.8591518631709829 32 AMTR_s00060p00125310 GPN-loop GTPase QQT1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00060.64 0.8579031913868657 69 AMTR_s00120p00109410 evm_27.TU.AmTr_v1.0_scaffold00120.50 0.8578533863336413 35 AMTR_s00059p00104220 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN4 component FUS8, EMB134, CSN4, COP8, COP14, ATS4, FUS4, evm_27.TU.AmTr_v1.0_scaffold00059.78 0.8533303401743719 74 AMTR_s00088p00121830 DNA damage response.DNA repair polymerase activities.DNA polymerase lambda evm_27.TU.AmTr_v1.0_scaffold00088.88 0.8528461567034362 60 AMTR_s00007p00254340 Solute transport.channels.OSCA calcium-permeable channel evm_27.TU.AmTr_v1.0_scaffold00007.296 0.8523767123914384 41 AMTR_s00003p00166290 Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.141 0.8504555775593179 66 AMTR_s00036p00239250 evm_27.TU.AmTr_v1.0_scaffold00036.190 0.8498060228897075 45 AMTR_s00019p00240230 evm_27.TU.AmTr_v1.0_scaffold00019.350 0.8491891937211894 44 AMTR_s00005p00135530 Protein modification.hydroxylation.prolyl hydroxylase AT-P4H-1, evm_27.TU.AmTr_v1.0_scaffold00005.43 0.8487158045071541 50 AMTR_s00177p00026800 evm_27.TU.AmTr_v1.0_scaffold00177.4 0.8482646485114136 46 AMTR_s00088p00132770 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HPE1 splicing factor evm_27.TU.AmTr_v1.0_scaffold00088.99 0.8476680930480457 52 AMTR_s00066p00018250 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3j component evm_27.TU.AmTr_v1.0_scaffold00066.1 0.8470001657074815 84 AMTR_s00062p00141820 evm_27.TU.AmTr_v1.0_scaffold00062.126 0.8439032944542277 53 AMTR_s00061p00156200 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL11 component MRPL11, evm_27.TU.AmTr_v1.0_scaffold00061.143 0.8433717755216783 95 AMTR_s00068p00184270 Probable ubiquitin-conjugating enzyme E2 24 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00068.144 0.8432768554979336 66 AMTR_s00045p00157760 evm_27.TU.AmTr_v1.0_scaffold00045.173 0.8427018721848728 57 AMTR_s00022p00158890 Uncharacterized protein At2g17340 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.161 0.8406756212111166 59 AMTR_s00054p00079690 evm_27.TU.AmTr_v1.0_scaffold00054.26 0.8388297133461772 60 AMTR_s00045p00170740 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP3 component evm_27.TU.AmTr_v1.0_scaffold00045.203 0.8383770233783349 94 AMTR_s00012p00170560 evm_27.TU.AmTr_v1.0_scaffold00012.105 0.8378941688457723 63 AMTR_s00038p00132760 Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.77 0.8372801189106406 65 AMTR_s00010p00233620 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.RAE1 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00010.273 0.8340771882995608 75 AMTR_s00146p00072100 RNA processing.RNA modification.pseudouridylation.RluA-type RNA pseudouridine synthase evm_27.TU.AmTr_v1.0_scaffold00146.42 0.8319726332920933 91 AMTR_s00063p00180810 NADPH:quinone oxidoreductase OS=Arabidopsis thaliana NQR, evm_27.TU.AmTr_v1.0_scaffold00063.60 0.8314387109222038 76 AMTR_s00061p00197130 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.indole-3-glycerol phosphate synthase evm_27.TU.AmTr_v1.0_scaffold00061.233 0.8308292778097464 77 AMTR_s00044p00115050 Protein modification.N-linked glycosylation.oligosaccharyl transferase (OST) complex.OST1 component evm_27.TU.AmTr_v1.0_scaffold00044.89 0.8301748594012044 79 AMTR_s00045p00203300 evm_27.TU.AmTr_v1.0_scaffold00045.267 0.8294640191097954 81 AMTR_s00011p00253270 evm_27.TU.AmTr_v1.0_scaffold00011.162 0.8273224723847343 83 AMTR_s00065p00125910 GTP-binding protein At2g22870 OS=Arabidopsis thaliana EMB2001, evm_27.TU.AmTr_v1.0_scaffold00065.75 0.8246414579978092 85 AMTR_s00027p00227320 Pentatricopeptide repeat-containing protein At5g24830 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00027.100 0.8238102508644843 87 AMTR_s00156p00091480 evm_27.TU.AmTr_v1.0_scaffold00156.46 0.8223673649694523 90 AMTR_s00018p00120740 evm_27.TU.AmTr_v1.0_scaffold00018.55 0.8212233371154266 93 AMTR_s00041p00170140 DNA damage response.DNA repair mechanisms.base excision repair (BER).apurinic/apyrimidinic (AP) endonuclease activities.APE2 AP-endonuclease evm_27.TU.AmTr_v1.0_scaffold00041.124 0.8211126981916463 94 AMTR_s00003p00209480 Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.198 0.8206240232987057 97 AMTR_s00068p00157910 evm_27.TU.AmTr_v1.0_scaffold00068.108 0.8192527872693803 97 AMTR_s00022p00250340 Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.383 0.8179940795297588 98