Sequence Description Alias PCC hrr AMTR_s00109p00071210 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3l component evm_27.TU.AmTr_v1.0_scaffold00109.55 0.9471254562150453 5 AMTR_s00058p00127050 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00058.91 0.9373422522906224 2 AMTR_s00077p00094250 Lipid metabolism.lipid transport.FAX fatty acid export protein evm_27.TU.AmTr_v1.0_scaffold00077.77 0.9365187852138935 10 AMTR_s00003p00149890 DNA damage response.DNA repair mechanisms.base excision repair (BER).flap structure-specific endonuclease (FEN1) evm_27.TU.AmTr_v1.0_scaffold00003.122 0.9361823321464128 4 AMTR_s00072p00157670 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.PES component evm_27.TU.AmTr_v1.0_scaffold00072.97 0.9325734867392825 6 AMTR_s00027p00217440 evm_27.TU.AmTr_v1.0_scaffold00027.80 0.9288931257474873 7 AMTR_s00029p00201060 Solute transport.carrier-mediated transport.MC-type solute transporter ATPUMP1, UCP, UCP1, PUMP1, ATUCP1, evm_27.TU.AmTr_v1.0_scaffold00029.282 0.9278595551532827 7 AMTR_s00049p00173980 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT5 epsilon subunit evm_27.TU.AmTr_v1.0_scaffold00049.162 0.9273475451001032 12 AMTR_s00045p00223730 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-13 motor protein ATKINESIN-13A, KINESIN-13A, evm_27.TU.AmTr_v1.0_scaffold00045.315 0.9254602288863956 9 AMTR_s00071p00070350 Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase ATKRS-1, evm_27.TU.AmTr_v1.0_scaffold00071.41 0.9234443414036331 21 AMTR_s00149p00026500 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit evm_27.TU.AmTr_v1.0_scaffold00149.8 0.9185684126932443 14 AMTR_s00068p00130970 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase ATHDA19, HDA1, HD1, ATHD1, HDA19, RPD3A, evm_27.TU.AmTr_v1.0_scaffold00068.89 0.9180138140700466 20 AMTR_s00045p00160070 Protein modification.phosphorylation.TKL kinase superfamily.Extensin kinase evm_27.TU.AmTr_v1.0_scaffold00045.179 0.9138513530576046 13 AMTR_s00092p00123760 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS53/HIT1 component VPS53, HIT1, ATVPS53, evm_27.TU.AmTr_v1.0_scaffold00092.88 0.9138063839146155 72 AMTR_s00004p00166400 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP8, evm_27.TU.AmTr_v1.0_scaffold00004.183 0.9135877676294153 16 AMTR_s00004p00079950 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT8 theta subunit evm_27.TU.AmTr_v1.0_scaffold00004.65 0.9130424955006377 23 AMTR_s00099p00018620 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN5 regulatory component RPN5B, evm_27.TU.AmTr_v1.0_scaffold00099.5 0.9108387191194864 28 AMTR_s00004p00097520 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC3 component EMB251, RFC3, EMB161, EMB2775, evm_27.TU.AmTr_v1.0_scaffold00004.79 0.910440054104352 25 AMTR_s00046p00229090 evm_27.TU.AmTr_v1.0_scaffold00046.172 0.9075003209641216 19 AMTR_s00058p00112040 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana PHB1, ATPHB1, evm_27.TU.AmTr_v1.0_scaffold00058.65 0.9070707355859815 20 AMTR_s00061p00067260 High mobility group B protein 15 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.42 0.9056929637014467 30 AMTR_s00136p00065750 Cellular respiration.glycolysis.cytosolic glycolysis.phosphofructokinase activities.pyrophosphate-dependent phosphofructokinase evm_27.TU.AmTr_v1.0_scaffold00136.32 0.905572798244452 26 AMTR_s00040p00226100 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad5/16-like group.Rad5 chromatin remodeling factor RAD5, evm_27.TU.AmTr_v1.0_scaffold00040.267 0.9033252782047871 68 AMTR_s00010p00016450 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT6 zeta subunit evm_27.TU.AmTr_v1.0_scaffold00010.5 0.901493034370553 53 AMTR_s00047p00229860 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3m component evm_27.TU.AmTr_v1.0_scaffold00047.196 0.9014857451065247 25 AMTR_s00111p00088150 evm_27.TU.AmTr_v1.0_scaffold00111.58 0.9008007128933667 26 AMTR_s00061p00213950 RNA processing.RNA modification.rRNA/tRNA methylation.TRM10 tRNA guanosine-methyltransferase TRM10, AtTRM, evm_27.TU.AmTr_v1.0_scaffold00061.266 0.8990961340618777 29 AMTR_s00050p00189150 Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana ALE2, evm_27.TU.AmTr_v1.0_scaffold00050.51 0.8980023645274828 64 AMTR_s00002p00267210 evm_27.TU.AmTr_v1.0_scaffold00002.521 0.8967666256598443 32 AMTR_s00101p00134540 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Imp4 assembly factor IMP4, evm_27.TU.AmTr_v1.0_scaffold00101.112 0.8966103106917759 33 AMTR_s00002p00225030 DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00002.247 0.8961538851350777 35 AMTR_s00021p00234100 SUN domain-containing protein 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.233 0.8956707669250384 36 AMTR_s00048p00053570 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.TOZ assembly factor TOZ, evm_27.TU.AmTr_v1.0_scaffold00048.18 0.8952627015643865 37 AMTR_s00014p00250090 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit HAP13, evm_27.TU.AmTr_v1.0_scaffold00014.130 0.893646025566291 41 AMTR_s00006p00257410 evm_27.TU.AmTr_v1.0_scaffold00006.199 0.8932072666770762 55 AMTR_s00040p00223590 DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00040.260 0.8932042251507357 84 AMTR_s00028p00124690 evm_27.TU.AmTr_v1.0_scaffold00028.40 0.8912860953273632 45 AMTR_s00085p00011540 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00085.1 0.8908152111379201 47 AMTR_s00029p00146380 evm_27.TU.AmTr_v1.0_scaffold00029.171 0.8900382065719588 47 AMTR_s00109p00056900 La protein 1 OS=Arabidopsis thaliana AtLa1, La1, evm_27.TU.AmTr_v1.0_scaffold00109.42 0.8897454496470893 77 AMTR_s00059p00183080 Chromatin organisation.histone chaperone activities.NASP-type histone chaperone evm_27.TU.AmTr_v1.0_scaffold00059.197 0.887608431624041 51 AMTR_s00119p00125710 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.MOS4 component MOS4, evm_27.TU.AmTr_v1.0_scaffold00119.98 0.8871393795802587 52 AMTR_s00019p00253350 Protein modification.N-linked glycosylation.complex N-glycan maturation.class-I alpha-mannosidase I MNS1, MANIB, evm_27.TU.AmTr_v1.0_scaffold00019.426 0.8871190246638353 53 AMTR_s00062p00159540 DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00062.149 0.8867546917355874 57 AMTR_s00009p00218020 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Nop1/fibrillarin methyltransferase component FIB1, ATFIB1, ATFBR1, FBR1, SKIP7, evm_27.TU.AmTr_v1.0_scaffold00009.155 0.8848037732916351 58 AMTR_s00091p00066640 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL19 component evm_27.TU.AmTr_v1.0_scaffold00091.17 0.8844841070600097 59 AMTR_s00057p00039750 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDKD/CDK7 kinase CDKD1;1, CAK3AT, AT;CDKD;1, evm_27.TU.AmTr_v1.0_scaffold00057.19 0.8842364194013435 77 AMTR_s00004p00060080 RNA processing.RNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) RNA pseudouridylation complex.Gar1 core component evm_27.TU.AmTr_v1.0_scaffold00004.42 0.8829873662596994 62 AMTR_s00022p00213770 evm_27.TU.AmTr_v1.0_scaffold00022.253 0.882881701483203 63 AMTR_s00032p00058660 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NOG1 regulatory GTPase evm_27.TU.AmTr_v1.0_scaffold00032.37 0.8825266410939767 64 AMTR_s00071p00167530 evm_27.TU.AmTr_v1.0_scaffold00071.168 0.8816938795886465 67 AMTR_s00032p00071070 evm_27.TU.AmTr_v1.0_scaffold00032.43 0.8815750427931451 68 AMTR_s00056p00180950 Protein modification.peptide maturation.mitochondrion.MPP mitochondrial signal peptidase heterodimer.alpha subunit evm_27.TU.AmTr_v1.0_scaffold00056.160 0.8811206354056847 69 AMTR_s00102p00062980 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3e component TIF3E1, INT6, ATEIF3E-1, INT-6, ATINT6, EIF3E, evm_27.TU.AmTr_v1.0_scaffold00102.29 0.8810300172056589 70 AMTR_s00070p00137140 RNA processing.RNA modification.methylthiolation.tRNA methylthiotransferase evm_27.TU.AmTr_v1.0_scaffold00070.75 0.8798306168554446 73 AMTR_s00059p00214550 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.NUP58 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00059.254 0.8797477430027787 75 AMTR_s00022p00104360 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT5 regulatory component RPT5A, ATS6A.2, evm_27.TU.AmTr_v1.0_scaffold00022.94 0.8795639157090747 76 AMTR_s00059p00069290 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.gamma subunit evm_27.TU.AmTr_v1.0_scaffold00059.44 0.8795096213518233 77 AMTR_s00066p00162800 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL5 component OLI5, RPL5A, PGY3, ATL5, evm_27.TU.AmTr_v1.0_scaffold00066.175 0.8785283109296148 80 AMTR_s00061p00187310 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00061.212 0.8776495406227733 83 AMTR_s00021p00030140 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A OS=Prunus dulcis evm_27.TU.AmTr_v1.0_scaffold00021.9 0.8764988744713228 84 AMTR_s00016p00227740 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.RTR Holliday junction dissolution complex.RMI1 non-catalytic component ATRMI1, BLAP75, RMI1, evm_27.TU.AmTr_v1.0_scaffold00016.214 0.8763307600983675 85 AMTR_s00113p00140210 RNA processing.organelle machineries.ribonuclease activities.PNP polynucleotide phosphorylase evm_27.TU.AmTr_v1.0_scaffold00113.32 0.8759908270196873 86 AMTR_s00036p00239020 Chromatin organisation.histone modifications.histone arginine methylation.PRMT1 histone methylase ATPRMT11, ATPRMT1B, PRMT11, PRMT1B, evm_27.TU.AmTr_v1.0_scaffold00036.188 0.8748949361835873 88 AMTR_s00159p00042980 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.ERCC6 chromatin remodeling factor CHR24, evm_27.TU.AmTr_v1.0_scaffold00159.12 0.8748450287087035 89 AMTR_s00119p00124540 Protein translocation.mitochondrion.outer mitochondrion membrane TOM translocation system.Tom40 component TOM40, evm_27.TU.AmTr_v1.0_scaffold00119.97 0.874027784491211 93 AMTR_s00021p00236970 Pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Arabidopsis thaliana emb1796, evm_27.TU.AmTr_v1.0_scaffold00021.242 0.8738905149409725 94 AMTR_s00025p00100140 RNA biosynthesis.transcriptional activation.HUA2 transcription factor evm_27.TU.AmTr_v1.0_scaffold00025.84 0.8738298392995171 95 AMTR_s00066p00145760 evm_27.TU.AmTr_v1.0_scaffold00066.147 0.8737192289528062 97 AMTR_s00027p00225770 Solute transport.carrier-mediated transport.VIT family.metal cation transporter (MEB-type) evm_27.TU.AmTr_v1.0_scaffold00027.99 0.8728920570927993 99 AMTR_s00095p00019470 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.6 0.8725419237562814 100