Sequence Description Alias PCC hrr AMTR_s00012p00217710 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00012.161 0.919474770381505 31 AMTR_s00020p00207770 evm_27.TU.AmTr_v1.0_scaffold00020.85 0.9087941995372509 33 AMTR_s00101p00087960 Nucleotide metabolism.purines.phosphotransfers.guanylate kinase evm_27.TU.AmTr_v1.0_scaffold00101.64 0.9053325370216834 13 AMTR_s00034p00235670 Cell cycle.organelle machineries.DNA replication.DNA gyrase complex.subunit B GYRB1, evm_27.TU.AmTr_v1.0_scaffold00034.119 0.9041753667467618 80 AMTR_s00006p00242820 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component RPN1A, ATRPN1A, evm_27.TU.AmTr_v1.0_scaffold00006.121 0.9040298734589713 77 AMTR_s00109p00033810 Vesicle trafficking.endomembrane trafficking.vacuolar sorting.AP-4 vacuole cargo adaptor complex.AP4B large beta subunit evm_27.TU.AmTr_v1.0_scaffold00109.22 0.8986459100701052 18 AMTR_s00109p00121860 evm_27.TU.AmTr_v1.0_scaffold00109.121 0.8969501329623788 60 AMTR_s00040p00151890 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF12 component TAFII58, TAF12, evm_27.TU.AmTr_v1.0_scaffold00040.125 0.8966440471712163 27 AMTR_s00059p00212210 evm_27.TU.AmTr_v1.0_scaffold00059.248 0.8947415048937544 69 AMTR_s00057p00039750 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDKD/CDK7 kinase CDKD1;1, CAK3AT, AT;CDKD;1, evm_27.TU.AmTr_v1.0_scaffold00057.19 0.8946466864182719 51 AMTR_s00060p00130340 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin NUP155, evm_27.TU.AmTr_v1.0_scaffold00060.71 0.8934675497134908 83 AMTR_s00010p00245570 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED7 component evm_27.TU.AmTr_v1.0_scaffold00010.328 0.8931426991004326 16 AMTR_s00025p00248490 Cytoskeleton.microfilament network.actin polymerisation.villin actin-crosslinking factor ATVLN2, VLN2, evm_27.TU.AmTr_v1.0_scaffold00025.405 0.8923911823577173 36 AMTR_s00021p00207790 evm_27.TU.AmTr_v1.0_scaffold00021.180 0.8913288122873138 54 AMTR_s00057p00183920 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDK9 kinase evm_27.TU.AmTr_v1.0_scaffold00057.196 0.8912675637741536 20 AMTR_s00146p00044900 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.threonine.threonine synthase MTO2, TS, evm_27.TU.AmTr_v1.0_scaffold00146.23 0.8907753264402217 21 AMTR_s00007p00263470 COP1-interacting protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.340 0.8907408369292569 83 AMTR_s00003p00269470 evm_27.TU.AmTr_v1.0_scaffold00003.408 0.8906859000609612 81 AMTR_s00025p00204100 Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia evm_27.TU.AmTr_v1.0_scaffold00025.262 0.8903451659756527 45 AMTR_s00050p00189240 Protein modification.phosphorylation.TKL kinase superfamily.Extensin kinase ALE2, evm_27.TU.AmTr_v1.0_scaffold00050.52 0.8898900154241701 30 AMTR_s00062p00149800 evm_27.TU.AmTr_v1.0_scaffold00062.138 0.8862834278537922 76 AMTR_s00096p00094010 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.DRM2 de novo DNA methylase DRM2, DMT7, evm_27.TU.AmTr_v1.0_scaffold00096.44 0.8856800114498234 79 AMTR_s00025p00228240 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TASH3 component evm_27.TU.AmTr_v1.0_scaffold00025.330 0.8853620186525706 32 AMTR_s00117p00120670 Vesicle trafficking.endomembrane trafficking.vacuolar sorting.AP-4 vacuole cargo adaptor complex.AP4E large epsilon subunit evm_27.TU.AmTr_v1.0_scaffold00117.50 0.8849310366130063 34 AMTR_s00041p00031550 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor evm_27.TU.AmTr_v1.0_scaffold00041.15 0.8842979848253668 61 AMTR_s00017p00245850 Ubinuclein-1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00017.232 0.8822738904817615 38 AMTR_s00068p00188520 MACPF domain-containing protein NSL1 OS=Arabidopsis thaliana NSL1, evm_27.TU.AmTr_v1.0_scaffold00068.151 0.8805775028330171 74 AMTR_s00077p00082680 RNA biosynthesis.transcriptional activation.B3 superfamily.LAV-VAL transcription factor HSL1, VAL2, HSI2-L1, evm_27.TU.AmTr_v1.0_scaffold00077.66 0.8792838785230107 63 AMTR_s00059p00117370 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B4 component emb2444, evm_27.TU.AmTr_v1.0_scaffold00059.91 0.8790396965727275 45 AMTR_s00101p00154790 Protein modification.phosphorylation.CAMK kinase superfamily.CRK kinase ATCRK1, CRK1, ATCBK3, evm_27.TU.AmTr_v1.0_scaffold00101.130 0.8786633178955616 46 AMTR_s00010p00263000 Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.SSII-type starch synthase SS2, AtSS2, evm_27.TU.AmTr_v1.0_scaffold00010.483 0.8758542236546035 54 AMTR_s00058p00137050 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HOX-like transcription factor evm_27.TU.AmTr_v1.0_scaffold00058.101 0.8757312172372834 96 AMTR_s00009p00238900 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED12 component CCT, CRP, evm_27.TU.AmTr_v1.0_scaffold00009.205 0.8756463043782923 56 AMTR_s00101p00091430 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.ALADIN scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00101.68 0.8747809885743641 57 AMTR_s00162p00036870 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.phytyl-phosphate kinase (VTE6) evm_27.TU.AmTr_v1.0_scaffold00162.15 0.8746299497904292 58 AMTR_s00057p00205760 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN3 regulatory component HAP15, EMB2719, evm_27.TU.AmTr_v1.0_scaffold00057.246 0.8737189309680785 61 AMTR_s00027p00222730 evm_27.TU.AmTr_v1.0_scaffold00027.93 0.8726195835849749 81 AMTR_s00018p00254940 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00018.167 0.8725693060241302 64 AMTR_s00024p00240360 Pentatricopeptide repeat-containing protein At2g06000 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.279 0.8724912536096024 65 AMTR_s00011p00266440 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00011.230 0.8721776527229088 66 AMTR_s00080p00150020 External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.NIN transcription factor NLP7, evm_27.TU.AmTr_v1.0_scaffold00080.66 0.8720230276405299 67 AMTR_s00091p00075810 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00091.25 0.8720191129461579 68 AMTR_s00059p00069290 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.gamma subunit evm_27.TU.AmTr_v1.0_scaffold00059.44 0.870099823480133 92 AMTR_s00064p00192980 Protein modification.peptide maturation.mitochondrion.MPP mitochondrial signal peptidase heterodimer.beta subunit MPPBETA, evm_27.TU.AmTr_v1.0_scaffold00064.89 0.8690230881915403 77 AMTR_s00106p00091710 evm_27.TU.AmTr_v1.0_scaffold00106.60 0.8685346860412864 80 AMTR_s00148p00046020 RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor ARF16, evm_27.TU.AmTr_v1.0_scaffold00148.24 0.8685174641793069 81 AMTR_s00057p00212890 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component RPN1A, ATRPN1A, evm_27.TU.AmTr_v1.0_scaffold00057.266 0.8679516422351854 89 AMTR_s00040p00209940 Pentatricopeptide repeat-containing protein At4g20740 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00040.221 0.8662210911303927 94