Sequence Description Alias PCC hrr AMTR_s00110p00131200 Solute transport.primary active transport.P-type ATPase superfamily.P5 family.MIA P5-type cation-transporting ATPase PDR2, MIA, evm_27.TU.AmTr_v1.0_scaffold00110.105 0.9308626012196972 2 AMTR_s00109p00121860 evm_27.TU.AmTr_v1.0_scaffold00109.121 0.9269795523479966 8 AMTR_s00001p00272900 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.926412235714979 6 AMTR_s00057p00205760 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN3 regulatory component HAP15, EMB2719, evm_27.TU.AmTr_v1.0_scaffold00057.246 0.9181245767391937 4 AMTR_s00146p00044900 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.threonine.threonine synthase MTO2, TS, evm_27.TU.AmTr_v1.0_scaffold00146.23 0.9176522171974604 5 AMTR_s00138p00108220 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TWD40 component evm_27.TU.AmTr_v1.0_scaffold00138.52 0.9171500072661235 41 AMTR_s00147p00036340 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DegP7, evm_27.TU.AmTr_v1.0_scaffold00147.15 0.9151602082843354 40 AMTR_s00050p00189240 Protein modification.phosphorylation.TKL kinase superfamily.Extensin kinase ALE2, evm_27.TU.AmTr_v1.0_scaffold00050.52 0.9134492895838479 8 AMTR_s00025p00194920 Solute transport.primary active transport.VHP PPase family.VHP2 proton-translocating pyrophosphatase AVPL1, VP2, VHP2;1, AVP2, AtVHP2;1, evm_27.TU.AmTr_v1.0_scaffold00025.245 0.9125750632226223 9 AMTR_s00089p00034850 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN2 regulatory component evm_27.TU.AmTr_v1.0_scaffold00089.9 0.911992938964942 10 AMTR_s00039p00228400 evm_27.TU.AmTr_v1.0_scaffold00039.211 0.9094469340275604 12 AMTR_s00006p00242820 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component RPN1A, ATRPN1A, evm_27.TU.AmTr_v1.0_scaffold00006.121 0.90642150505798 69 AMTR_s00006p00256440 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-gamma component EIF2 GAMMA, evm_27.TU.AmTr_v1.0_scaffold00006.192 0.9055107887693153 48 AMTR_s00063p00100200 PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00063.17 0.9035277432689534 61 AMTR_s00088p00115810 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.argininosuccinate synthetase evm_27.TU.AmTr_v1.0_scaffold00088.82 0.903374441853061 68 AMTR_s00059p00069290 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.gamma subunit evm_27.TU.AmTr_v1.0_scaffold00059.44 0.9031899700916669 17 AMTR_s00115p00126760 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor HUA1, evm_27.TU.AmTr_v1.0_scaffold00115.20 0.9029737001492751 83 AMTR_s00019p00231450 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN5 component CSN5B, CSN5, AJH2, evm_27.TU.AmTr_v1.0_scaffold00019.317 0.9003308310262568 33 AMTR_s00119p00021560 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00119.5 0.9002931213125516 30 AMTR_s00007p00259060 Suppressor of mec-8 and unc-52 protein homolog 2 OS=Arabidopsis thaliana SMU2, evm_27.TU.AmTr_v1.0_scaffold00007.316 0.8987124438142265 50 AMTR_s00076p00078090 Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana PTB3, evm_27.TU.AmTr_v1.0_scaffold00076.20 0.8985387053165289 71 AMTR_s00002p00059110 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB4 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00002.23 0.8980707651610887 86 AMTR_s00036p00239020 Chromatin organisation.histone modifications.histone arginine methylation.PRMT1 histone methylase ATPRMT11, ATPRMT1B, PRMT11, PRMT1B, evm_27.TU.AmTr_v1.0_scaffold00036.188 0.8979637468069813 34 AMTR_s00016p00145050 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT4 delta subunit evm_27.TU.AmTr_v1.0_scaffold00016.100 0.8959673957358243 25 AMTR_s00029p00103360 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40C pre-mRNA-processing protein ATPRP40C, PRP40C, evm_27.TU.AmTr_v1.0_scaffold00029.100 0.8956626486158824 26 AMTR_s00082p00169320 RNA biosynthesis.transcriptional activation.GeBP transcription factor evm_27.TU.AmTr_v1.0_scaffold00082.40 0.8949561754753752 28 AMTR_s00021p00078920 Protein modification.phosphorylation.SCY1 kinase evm_27.TU.AmTr_v1.0_scaffold00021.35 0.8940479986616435 71 AMTR_s00099p00155940 RNA biosynthesis.transcriptional activation.Alfin-like transcription factor AL5, evm_27.TU.AmTr_v1.0_scaffold00099.152 0.8920585920758506 32 AMTR_s00101p00087960 Nucleotide metabolism.purines.phosphotransfers.guanylate kinase evm_27.TU.AmTr_v1.0_scaffold00101.64 0.8909004004427437 38 AMTR_s00040p00228310 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP2A large alpha subunit alpha-ADR, evm_27.TU.AmTr_v1.0_scaffold00040.272 0.8899926841679592 51 AMTR_s00022p00238440 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit evm_27.TU.AmTr_v1.0_scaffold00022.334 0.8883347410490734 38 AMTR_s00019p00252390 Solute transport.carrier-mediated transport.CDF superfamily.CDF family.putative zinc cation transporter evm_27.TU.AmTr_v1.0_scaffold00019.421 0.8882985439484463 55 AMTR_s00171p00048400 Cellular respiration.glycolysis.cytosolic glycolysis.pyruvate kinase evm_27.TU.AmTr_v1.0_scaffold00171.30 0.8871287788421919 41 AMTR_s00041p00134980 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.MTA component MTA, EMB1706, evm_27.TU.AmTr_v1.0_scaffold00041.95 0.887076417098784 42 AMTR_s00022p00213770 evm_27.TU.AmTr_v1.0_scaffold00022.253 0.8869352799861627 44 AMTR_s00147p00076810 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2B eIF2-GDP recycling complex.eIF2B-delta evm_27.TU.AmTr_v1.0_scaffold00147.36 0.886635792350978 90 AMTR_s00077p00187600 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-VII kinase families.RLCK-VIIa kinase evm_27.TU.AmTr_v1.0_scaffold00077.219 0.8866046251988365 46 AMTR_s00039p00218660 Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.non-core components.alpha subcomplex.NDUFA9 component evm_27.TU.AmTr_v1.0_scaffold00039.189 0.8863586520683538 47 AMTR_s00019p00154210 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RSZ21/22 splicing factor At-RSZ22a, RSZ22a, evm_27.TU.AmTr_v1.0_scaffold00019.143 0.88599938928633 66 AMTR_s00071p00153630 Ran-binding protein M homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.142 0.8856039072202618 92 AMTR_s00009p00262150 RNA processing.RNA decay.exosome complex.EXO9 core complex.RRP40 component evm_27.TU.AmTr_v1.0_scaffold00009.345 0.8854434922475181 97 AMTR_s00046p00168380 Flowering time control protein FCA OS=Arabidopsis thaliana FCA, evm_27.TU.AmTr_v1.0_scaffold00046.92 0.8854013897669725 54 AMTR_s00111p00143660 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component evm_27.TU.AmTr_v1.0_scaffold00111.124 0.8847273714148881 52 AMTR_s00025p00204100 Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia evm_27.TU.AmTr_v1.0_scaffold00025.262 0.8846365758684306 53 AMTR_s00016p00160930 Vesicle trafficking.endomembrane trafficking.post-Golgi trafficking.SCD complex.SCD2 protein evm_27.TU.AmTr_v1.0_scaffold00016.117 0.8844621751926378 54 AMTR_s00063p00034480 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Pfs2/FY component FY, evm_27.TU.AmTr_v1.0_scaffold00063.6 0.8839144702039597 55 AMTR_s00064p00192980 Protein modification.peptide maturation.mitochondrion.MPP mitochondrial signal peptidase heterodimer.beta subunit MPPBETA, evm_27.TU.AmTr_v1.0_scaffold00064.89 0.8835104044494194 56 AMTR_s00057p00039750 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDKD/CDK7 kinase CDKD1;1, CAK3AT, AT;CDKD;1, evm_27.TU.AmTr_v1.0_scaffold00057.19 0.8832267397571429 79 AMTR_s00109p00054710 Solute transport.primary active transport.V-type ATPase complex.peripheral V1 subcomplex.subunit B evm_27.TU.AmTr_v1.0_scaffold00109.40 0.8827407785579523 85 AMTR_s00059p00105450 evm_27.TU.AmTr_v1.0_scaffold00059.80 0.8825633030969956 98 AMTR_s00004p00166400 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP8, evm_27.TU.AmTr_v1.0_scaffold00004.183 0.882509375096881 88 AMTR_s00175p00061780 Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana PTB3, evm_27.TU.AmTr_v1.0_scaffold00175.34 0.8821494190969221 61 AMTR_s00029p00238480 evm_27.TU.AmTr_v1.0_scaffold00029.400 0.881371652855976 96 AMTR_s00057p00212890 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component RPN1A, ATRPN1A, evm_27.TU.AmTr_v1.0_scaffold00057.266 0.8809224636280105 63 AMTR_s00108p00104150 Protein translocation.nucleus.nucleocytoplasmic transport.importin alpha adaptor proteins IMPA-9, evm_27.TU.AmTr_v1.0_scaffold00108.20 0.880906349608426 78 AMTR_s00024p00180690 Splicing factor-like protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.141 0.8807842128879627 65 AMTR_s00009p00267190 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor complex.large subunit ATU2AF65A, evm_27.TU.AmTr_v1.0_scaffold00009.402 0.879631792895686 67 AMTR_s00071p00045940 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component ERMO2, SEC24A, evm_27.TU.AmTr_v1.0_scaffold00071.24 0.8795762171506508 68 AMTR_s00019p00255470 Protein biosynthesis.translation elongation.eEF1B eEF1A-GDP-recycling complex.eEF1B-gamma component evm_27.TU.AmTr_v1.0_scaffold00019.442 0.87951287092985 78 AMTR_s00024p00115620 Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.65 0.8788909543614469 75 AMTR_s00005p00241450 evm_27.TU.AmTr_v1.0_scaffold00005.130 0.877640084213696 73 AMTR_s00111p00143180 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component evm_27.TU.AmTr_v1.0_scaffold00111.123 0.8776256056967499 74 AMTR_s00057p00183920 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDK9 kinase evm_27.TU.AmTr_v1.0_scaffold00057.196 0.8776138743687955 75 AMTR_s00040p00151890 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF12 component TAFII58, TAF12, evm_27.TU.AmTr_v1.0_scaffold00040.125 0.8774650226587295 76 AMTR_s00119p00113390 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00119.87 0.877352235573732 78 AMTR_s00077p00082680 RNA biosynthesis.transcriptional activation.B3 superfamily.LAV-VAL transcription factor HSL1, VAL2, HSI2-L1, evm_27.TU.AmTr_v1.0_scaffold00077.66 0.8771157744975611 80 AMTR_s00006p00242700 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.SWA1 assembly factor EDA13, EDA19, SWA1, evm_27.TU.AmTr_v1.0_scaffold00006.119 0.8764750969683012 81 AMTR_s00036p00235910 evm_27.TU.AmTr_v1.0_scaffold00036.181 0.8764375934359885 82 AMTR_s00008p00163370 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec23 component evm_27.TU.AmTr_v1.0_scaffold00008.84 0.8762851908135046 83 AMTR_s00051p00218610 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.PTEN lipid phosphatase PEN2, ATPEN2, evm_27.TU.AmTr_v1.0_scaffold00051.97 0.876147576674024 84 AMTR_s00039p00212570 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.MAC3 component MAC3A, evm_27.TU.AmTr_v1.0_scaffold00039.183 0.8759567996843325 85 AMTR_s00049p00181100 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor REF6, evm_27.TU.AmTr_v1.0_scaffold00049.175 0.8756822776594175 86 AMTR_s00023p00210090 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.fungal elicitor response.PBL27/RLCK185 kinase evm_27.TU.AmTr_v1.0_scaffold00023.153 0.8749935121059245 87 AMTR_s00171p00023840 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component evm_27.TU.AmTr_v1.0_scaffold00171.4 0.8747880882460045 88 AMTR_s00059p00146300 Protein degradation.peptidase families.metallopeptidase activities.Leishmanolysin-type protease evm_27.TU.AmTr_v1.0_scaffold00059.129 0.8737000869491197 90 AMTR_s00059p00054360 Cellular respiration.tricarboxylic acid cycle.succinate dehydrogenase complex.SDH1-type flavoprotein component SDH1-1, evm_27.TU.AmTr_v1.0_scaffold00059.34 0.8735510319093389 91 AMTR_s00048p00075850 RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor HSFA1B, ATHSF3, HSF3, ATHSFA1B, evm_27.TU.AmTr_v1.0_scaffold00048.34 0.8732380078016987 93 AMTR_s00041p00192380 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00041.165 0.8725405035662473 94 AMTR_s00003p00257690 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TPLATE component TPLATE, evm_27.TU.AmTr_v1.0_scaffold00003.321 0.8718704837916809 95 AMTR_s00016p00205550 evm_27.TU.AmTr_v1.0_scaffold00016.172 0.8717906930689417 96 AMTR_s00025p00228240 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TASH3 component evm_27.TU.AmTr_v1.0_scaffold00025.330 0.8714936418592507 97