Sequence Description Alias PCC hrr AMTR_s00058p00047610 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.transketolase evm_27.TU.AmTr_v1.0_scaffold00058.18 0.9242522719906379 2 AMTR_s00001p00232760 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component FTSH5, VAR1, evm_27.TU.AmTr_v1.0_scaffold00001.249 0.9239904971046518 6 AMTR_s00016p00087320 evm_27.TU.AmTr_v1.0_scaffold00016.49 0.9110122506846958 5 AMTR_s00038p00182380 External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.CRY cryptochrome photoreceptor HY4, ATCRY1, BLU1, OOP2, CRY1, evm_27.TU.AmTr_v1.0_scaffold00038.124 0.9070586766322274 19 AMTR_s00039p00159460 evm_27.TU.AmTr_v1.0_scaffold00039.112 0.9002823580451107 7 AMTR_s00017p00252910 Protein modification.phosphorylation.TKL kinase superfamily.RKF3 kinase evm_27.TU.AmTr_v1.0_scaffold00017.261 0.8944072644333023 36 AMTR_s00012p00254470 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase evm_27.TU.AmTr_v1.0_scaffold00012.276 0.8926193338011541 7 AMTR_s00001p00262320 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.BEL transcription factor BLH2, SAW1, evm_27.TU.AmTr_v1.0_scaffold00001.384 0.8917599841803371 21 AMTR_s00009p00268850 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.transketolase evm_27.TU.AmTr_v1.0_scaffold00009.433 0.8884877437961703 9 AMTR_s00025p00153820 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component evm_27.TU.AmTr_v1.0_scaffold00025.172 0.8842189624038972 10 AMTR_s00024p00248370 evm_27.TU.AmTr_v1.0_scaffold00024.319 0.8824833496062159 45 AMTR_s00126p00110160 RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.PMH RNA helicase PMH2, ATRH53, evm_27.TU.AmTr_v1.0_scaffold00126.53 0.8813385017889638 34 AMTR_s00044p00131190 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase GAPB, evm_27.TU.AmTr_v1.0_scaffold00044.119 0.8763056189542758 62 AMTR_s00009p00163120 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo assembly.RAF1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00009.90 0.8747730513725553 36 AMTR_s00166p00060690 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.CP31 RNA editing factor ATRBP31, CP31, ATRBP33, RBP31, evm_27.TU.AmTr_v1.0_scaffold00166.36 0.8690190781102695 45 AMTR_s00009p00268340 Protein degradation.peptidase families.serine-type peptidase activities.LON protease evm_27.TU.AmTr_v1.0_scaffold00009.422 0.8688421814842361 37 AMTR_s00147p00070270 Cytoskeleton.cp-actin-dependent plastid movement.CHUP motility factor CHUP1, evm_27.TU.AmTr_v1.0_scaffold00147.32 0.8683610084942671 41 AMTR_s00135p00104240 Solute transport.carrier-mediated transport.DMT superfamily.PUP organic cation transporter PUP1, ATPUP1, evm_27.TU.AmTr_v1.0_scaffold00135.60 0.8680710594601236 45 AMTR_s00170p00069910 evm_27.TU.AmTr_v1.0_scaffold00170.33 0.8671591934704518 30 AMTR_s00119p00030390 Protein NCA1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00119.14 0.8657338225376652 24 AMTR_s00037p00164200 Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.SSIII-type starch synthase ATSS3, SS3, evm_27.TU.AmTr_v1.0_scaffold00037.78 0.8648415629537174 24 AMTR_s00165p00028990 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00165.13 0.8641970121312487 23 AMTR_s00069p00198820 Solute transport.channels.SLAC anion channel RCD3, CDI3, SLAC1, OZS1, evm_27.TU.AmTr_v1.0_scaffold00069.215 0.864163356040004 50 AMTR_s00037p00234060 Photosynthesis.photorespiration.glycine cleavage system.T-protein aminomethyltransferase component evm_27.TU.AmTr_v1.0_scaffold00037.152 0.8640997145216961 54 AMTR_s00057p00165650 evm_27.TU.AmTr_v1.0_scaffold00057.165 0.8626760039692114 35 AMTR_s00032p00233360 36.4 kDa proline-rich protein OS=Solanum lycopersicum evm_27.TU.AmTr_v1.0_scaffold00032.260 0.8625021674527418 26 AMTR_s00056p00092670 evm_27.TU.AmTr_v1.0_scaffold00056.67 0.862391354883805 40 AMTR_s00022p00031050 Protein modification.phosphorylation.TKL kinase superfamily.WAK/WAKL kinase WAK5, evm_27.TU.AmTr_v1.0_scaffold00022.14 0.8605163427458427 36 AMTR_s00073p00093410 Secondary metabolism.phenolics.flavonoid synthesis and modification.flavons and flavonols.flavonol synthase FLS1, ATFLS1, FLS, evm_27.TU.AmTr_v1.0_scaffold00073.24 0.8598060358154622 43 AMTR_s00024p00238310 YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana YLMG2, ATYLMG2, evm_27.TU.AmTr_v1.0_scaffold00024.270 0.858259736425031 52 AMTR_s00006p00268060 Enzyme classification.EC_1 oxidoreductases.EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor ALDH2B, ALDH2B7, evm_27.TU.AmTr_v1.0_scaffold00006.309 0.8581989142449 31 AMTR_s00012p00044890 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00012.9 0.8573532886473801 42 AMTR_s00001p00262360 evm_27.TU.AmTr_v1.0_scaffold00001.385 0.8567591008060002 44 AMTR_s00059p00139560 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.CCV accessory factors.AUL clathrin uncoating protein JAC1, evm_27.TU.AmTr_v1.0_scaffold00059.122 0.8557557891132146 39 AMTR_s00007p00241580 evm_27.TU.AmTr_v1.0_scaffold00007.255 0.8554619055019869 43 AMTR_s00067p00206610 evm_27.TU.AmTr_v1.0_scaffold00067.230 0.854612603671112 64 AMTR_s00091p00081150 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00091.27 0.854213806001624 90 AMTR_s00046p00093500 Photosynthesis.photophosphorylation.ATP synthase complex.membrane CF0 subcomplex.subunit b_ evm_27.TU.AmTr_v1.0_scaffold00046.51 0.853136352983572 68 AMTR_s00008p00068860 Probable calcium-binding protein CML29 OS=Oryza sativa subsp. japonica ATCML9, CAM9, CML9, evm_27.TU.AmTr_v1.0_scaffold00008.23 0.8524501843309842 40 AMTR_s00073p00061640 RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/CONSTANS transcription factor evm_27.TU.AmTr_v1.0_scaffold00073.16 0.8515400204354061 56 AMTR_s00015p00253000 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial OS=Arabidopsis thaliana ATSIG5, SIG5, SIGE, evm_27.TU.AmTr_v1.0_scaffold00015.107 0.851530665909102 51 AMTR_s00056p00227590 Phytohormones.abscisic acid.perception and signalling.PYR/PYL-receptor.cytoplasm-localized receptor complex.PYL/RCAR-type receptor component RCAR14, PYL2, evm_27.TU.AmTr_v1.0_scaffold00056.231 0.8508101100836005 44 AMTR_s00357p00011320 MRL1, evm_27.TU.AmTr_v1.0_scaffold00357.3 0.8503898355874658 45 AMTR_s00040p00037300 Solute transport.carrier-mediated transport.DMT superfamily.UmamiT-type solute transporter evm_27.TU.AmTr_v1.0_scaffold00040.17 0.8500586514578758 59 AMTR_s00053p00027630 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase UGT88A1, evm_27.TU.AmTr_v1.0_scaffold00053.10 0.848935809332927 47 AMTR_s00029p00187590 Photosynthesis.calvin cycle.fructose-1,6-bisphosphatase HCEF1, evm_27.TU.AmTr_v1.0_scaffold00029.249 0.8487205297483875 88 AMTR_s00106p00057410 evm_27.TU.AmTr_v1.0_scaffold00106.33 0.845160287057791 51 AMTR_s00061p00053670 Protein degradation.peptidase families.aspartic-type peptidase activities.pepsin-type protease evm_27.TU.AmTr_v1.0_scaffold00061.31 0.8449017852633731 50 AMTR_s00096p00114120 Carbohydrate metabolism.raffinose family oligosaccharide biosynthesis.galactinol synthase AtGolS4, GolS4, evm_27.TU.AmTr_v1.0_scaffold00096.70 0.8443692428706309 81 AMTR_s00067p00091510 Probable F-box protein At4g22030 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.68 0.8436743383230404 61 AMTR_s00062p00151050 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP716A1, evm_27.TU.AmTr_v1.0_scaffold00062.139 0.8429850350342697 67 AMTR_s00015p00252960 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor ATSIG5, SIG5, SIGE, evm_27.TU.AmTr_v1.0_scaffold00015.106 0.8429462078651357 54 AMTR_s00011p00255760 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.NCED carotenoid cleavage dioxygenase CCD4, NCED4, evm_27.TU.AmTr_v1.0_scaffold00011.172 0.8427249586733252 55 AMTR_s00010p00259290 External stimuli response.light.UV-A/blue light.phototropin-mediated photoperception.PKS phototropin signalling factor PKS4, evm_27.TU.AmTr_v1.0_scaffold00010.421 0.8422640194223924 63 AMTR_s00059p00164750 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.BEL transcription factor BLH2, SAW1, evm_27.TU.AmTr_v1.0_scaffold00059.154 0.8413587402388488 76 AMTR_s00025p00232880 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF173 protein HCF173, evm_27.TU.AmTr_v1.0_scaffold00025.342 0.8405085008517587 59 AMTR_s00049p00210480 evm_27.TU.AmTr_v1.0_scaffold00049.235 0.8404883372871536 59 AMTR_s00024p00110840 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor evm_27.TU.AmTr_v1.0_scaffold00024.57 0.8399529508560554 60 AMTR_s00044p00107090 Cytoskeleton.cp-actin-dependent plastid movement.PMI1/PMI15 cp-actin stability factor PMI1, evm_27.TU.AmTr_v1.0_scaffold00044.78 0.8391300915199041 72 AMTR_s00171p00037370 Redox homeostasis.chloroplast redox homeostasis.ferredoxin-dependent thioredoxin reductase (FTR) complex.alpha subunit FTRA2, evm_27.TU.AmTr_v1.0_scaffold00171.14 0.8380333914080206 73 AMTR_s00025p00227780 Enzyme classification.EC_2 transferases.EC_2.3 acyltransferase evm_27.TU.AmTr_v1.0_scaffold00025.328 0.8376078315638964 73 AMTR_s00160p00061420 evm_27.TU.AmTr_v1.0_scaffold00160.16 0.8370507476756145 66 AMTR_s00091p00128090 evm_27.TU.AmTr_v1.0_scaffold00091.48 0.836485058559212 67 AMTR_s00001p00233320 evm_27.TU.AmTr_v1.0_scaffold00001.251 0.835839085032025 69 AMTR_s00165p00029520 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase UGT85A1, ATUGT85A1, evm_27.TU.AmTr_v1.0_scaffold00165.14 0.8351493798423089 69 AMTR_s00072p00130550 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00072.71 0.8342912501081453 70 AMTR_s00007p00182110 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP4 protein evm_27.TU.AmTr_v1.0_scaffold00007.145 0.8334899013817231 71 AMTR_s00002p00263020 Protein modification.phosphorylation.TKL kinase superfamily.G-Lectin kinase families.SD-2 kinase SD2-5, evm_27.TU.AmTr_v1.0_scaffold00002.472 0.8329515895335358 72 AMTR_s00018p00061120 Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00018.18 0.832350557782167 73 AMTR_s00002p00212650 Enzyme classification.EC_1 oxidoreductases.EC_1.8 oxidoreductase acting on sulfur group of donor PMSR4, evm_27.TU.AmTr_v1.0_scaffold00002.223 0.8299824084792554 85 AMTR_s00022p00142650 Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.137 0.8276967778145593 75 AMTR_s00059p00164710 evm_27.TU.AmTr_v1.0_scaffold00059.153 0.8262293504777415 100 AMTR_s00119p00032590 evm_27.TU.AmTr_v1.0_scaffold00119.15 0.8258377239151783 78 AMTR_s00021p00148410 GDSL esterase/lipase At5g45920 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.102 0.8255196900587655 79 AMTR_s00002p00271280 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris evm_27.TU.AmTr_v1.0_scaffold00002.619 0.8244913488026029 84 AMTR_s00061p00163970 evm_27.TU.AmTr_v1.0_scaffold00061.161 0.8242265846077342 85 AMTR_s00136p00018270 Solute transport.carrier-mediated transport.MC-type solute transporter evm_27.TU.AmTr_v1.0_scaffold00136.2 0.8240482683095904 86 AMTR_s00024p00111030 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor evm_27.TU.AmTr_v1.0_scaffold00024.57 0.8225276566031327 87 AMTR_s00101p00155540 evm_27.TU.AmTr_v1.0_scaffold00101.131 0.8216716301373979 88 AMTR_s00048p00195780 Solute transport.carrier-mediated transport.APC superfamily.DUR proton:urea symporter ATDUR3, DUR3, evm_27.TU.AmTr_v1.0_scaffold00048.159 0.8215345816546186 89 AMTR_s00112p00098670 Phytohormones.ethylene.synthesis.1-aminocyclopropane-1-carboxylate (ACC) oxidase ACO4, EAT1, EFE, evm_27.TU.AmTr_v1.0_scaffold00112.24 0.818998738887804 93 AMTR_s00019p00212840 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor ZFP4, evm_27.TU.AmTr_v1.0_scaffold00019.259 0.8189037137123918 94 AMTR_s00075p00194500 evm_27.TU.AmTr_v1.0_scaffold00075.69 0.818708585358536 95 AMTR_s00025p00227680 Enzyme classification.EC_2 transferases.EC_2.3 acyltransferase evm_27.TU.AmTr_v1.0_scaffold00025.328 0.818260340033354 97