Sequence Description Alias PCC hrr AMTR_s00004p00118340 evm_27.TU.AmTr_v1.0_scaffold00004.101 0.9606990012286729 1 AMTR_s00058p00120430 evm_27.TU.AmTr_v1.0_scaffold00058.82 0.9550358192921632 5 AMTR_s00056p00038090 RNA processing.ribonuclease activities.RNase Z endoribonuclease TRZ4, evm_27.TU.AmTr_v1.0_scaffold00056.21 0.9544162570033162 3 AMTR_s00077p00115750 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00077.105 0.953448458123252 10 AMTR_s00061p00213120 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00061.265 0.953355190077244 17 AMTR_s00002p00271990 evm_27.TU.AmTr_v1.0_scaffold00002.653 0.9519014200006848 14 AMTR_s00065p00048130 DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00065.24 0.9507203626993178 12 AMTR_s00090p00083520 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp22 RNA helicase evm_27.TU.AmTr_v1.0_scaffold00090.29 0.9487763754672719 13 AMTR_s00055p00041510 Histidine kinase 1 OS=Arabidopsis thaliana AHK1, HK1, ATHK1, evm_27.TU.AmTr_v1.0_scaffold00055.12 0.9487133026225889 13 AMTR_s00049p00011400 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.2 0.9476648021456093 11 AMTR_s00025p00031700 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.NDX transcription factor evm_27.TU.AmTr_v1.0_scaffold00025.12 0.9464014469800761 11 AMTR_s00110p00053630 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin loading.SCC2 adherin SCC2, ATSCC2, EMB2773, evm_27.TU.AmTr_v1.0_scaffold00110.24 0.945998905960793 29 AMTR_s00110p00037960 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SMARCAL1-like group.SMARCAL1 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00110.12 0.9444541462790883 43 AMTR_s00045p00068210 RNA processing.RNA modification.rRNA/tRNA methylation.TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex.TRM734 component evm_27.TU.AmTr_v1.0_scaffold00045.55 0.9435880210176365 54 AMTR_s00002p00268330 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase) evm_27.TU.AmTr_v1.0_scaffold00002.535 0.9417362262905722 31 AMTR_s00010p00217580 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.ACINUS component evm_27.TU.AmTr_v1.0_scaffold00010.224 0.940621421941893 16 AMTR_s00008p00268620 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.RAD17 checkpoint protein evm_27.TU.AmTr_v1.0_scaffold00008.241 0.9400305966987348 17 AMTR_s00110p00154620 Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana emb2458, evm_27.TU.AmTr_v1.0_scaffold00110.130 0.9388935505538927 18 AMTR_s00059p00194330 evm_27.TU.AmTr_v1.0_scaffold00059.216 0.9388724678451514 53 AMTR_s00026p00019230 DNA repair protein UVH3 OS=Arabidopsis thaliana UVR1, UVH3, evm_27.TU.AmTr_v1.0_scaffold00026.2 0.9386506148273986 32 AMTR_s00002p00271330 Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.622 0.9379586390101845 21 AMTR_s00029p00248990 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B2 component evm_27.TU.AmTr_v1.0_scaffold00029.453 0.9378287229971795 22 AMTR_s00002p00261540 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00002.453 0.9374799878770202 36 AMTR_s00002p00255750 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL7, evm_27.TU.AmTr_v1.0_scaffold00002.396 0.937217740426175 24 AMTR_s00032p00063530 evm_27.TU.AmTr_v1.0_scaffold00032.40 0.9368093103535845 27 AMTR_s00014p00034060 Cell wall.callose.callose synthase GSL04, atgsl4, gsl04, ATGSL04, evm_27.TU.AmTr_v1.0_scaffold00014.10 0.936627285487845 26 AMTR_s00036p00162680 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana SRS2, ATSRS2, evm_27.TU.AmTr_v1.0_scaffold00036.78 0.9362623244457051 27 AMTR_s00142p00102260 Protein modification.acetylation.NatA-type N-terminal acetylase complex.NAA15 auxiliary component EMB2753, evm_27.TU.AmTr_v1.0_scaffold00142.67 0.9358836204576263 52 AMTR_s00058p00177950 evm_27.TU.AmTr_v1.0_scaffold00058.168 0.9355788460183478 46 AMTR_s00040p00198390 Calmodulin-interacting protein 111 OS=Arabidopsis thaliana CIP111, evm_27.TU.AmTr_v1.0_scaffold00040.199 0.9352925172864676 30 AMTR_s00074p00196560 Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00074.124 0.9350395290893045 31 AMTR_s00080p00074320 Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00080.23 0.9344048020681212 32 AMTR_s00013p00258230 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.RAD50 component RAD50, ATRAD50, evm_27.TU.AmTr_v1.0_scaffold00013.257 0.9343724863351277 33 AMTR_s00037p00070040 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00037.19 0.9343435513992736 58 AMTR_s00085p00139780 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.MORC-type auxilary factor evm_27.TU.AmTr_v1.0_scaffold00085.89 0.9341084748922469 38 AMTR_s00066p00163770 ELF9, evm_27.TU.AmTr_v1.0_scaffold00066.177 0.933695017181286 36 AMTR_s00054p00159220 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-7 motor protein evm_27.TU.AmTr_v1.0_scaffold00054.57 0.9336153515425945 37 AMTR_s00001p00273020 External stimuli response.biotic stress.pathogen effector.NLR effector receptor evm_27.TU.AmTr_v1.0_scaffold00001.586 0.9332783882340581 65 AMTR_s00010p00258180 EMB2756, evm_27.TU.AmTr_v1.0_scaffold00010.410 0.9332568773568967 39 AMTR_s00041p00059380 evm_27.TU.AmTr_v1.0_scaffold00041.32 0.9328259002752521 56 AMTR_s00018p00182200 evm_27.TU.AmTr_v1.0_scaffold00018.101 0.9325583347132365 41 AMTR_s00033p00216940 Solute transport.carrier-mediated transport.DMT superfamily.CLT glutathione transporter CLT2, evm_27.TU.AmTr_v1.0_scaffold00033.192 0.9317916586723475 42 AMTR_s00004p00115360 DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.98 0.9314890045476284 71 AMTR_s00045p00168580 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class I/Ez histone methyltransferase component SDG10, EZA1, SWN, evm_27.TU.AmTr_v1.0_scaffold00045.200 0.9306025882118184 44 AMTR_s00085p00149180 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.DNA helicase (RCK/MER3) RCK, MER3, evm_27.TU.AmTr_v1.0_scaffold00085.93 0.9305754674357422 59 AMTR_s00085p00151790 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B-type regulatory component ATB BETA, evm_27.TU.AmTr_v1.0_scaffold00085.94 0.9303949081394685 46 AMTR_s00099p00147110 EMB140, evm_27.TU.AmTr_v1.0_scaffold00099.133 0.9303574428350379 47 AMTR_s00029p00206820 RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI2 RNA helicase component evm_27.TU.AmTr_v1.0_scaffold00029.298 0.9300225023868383 48 AMTR_s00061p00026580 Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase MGO1, TOP1, TOP1ALPHA, evm_27.TU.AmTr_v1.0_scaffold00061.1 0.9300155782894107 49 AMTR_s00086p00165640 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor PKL, GYM, CHR6, SSL2, CHD3, evm_27.TU.AmTr_v1.0_scaffold00086.104 0.929863057544379 50 AMTR_s00007p00224640 GTP-binding protein At2g22870 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.219 0.9297422033403405 51 AMTR_s00058p00185710 evm_27.TU.AmTr_v1.0_scaffold00058.180 0.929616524471759 52 AMTR_s00016p00255820 RNA biosynthesis.transcriptional activation.FAR1 transcription factor FRS5, evm_27.TU.AmTr_v1.0_scaffold00016.335 0.929542752659715 53 AMTR_s00002p00199670 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF4 component TAF4, TAF4B, evm_27.TU.AmTr_v1.0_scaffold00002.188 0.9285968120958926 54 AMTR_s00085p00089520 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.PIE1 ATPase component SRCAP, PIE1, chr13, evm_27.TU.AmTr_v1.0_scaffold00085.48 0.9284285598201456 55 AMTR_s00197p00038370 evm_27.TU.AmTr_v1.0_scaffold00197.18 0.9283695914103852 64 AMTR_s00017p00192140 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00017.112 0.9278501410831174 66 AMTR_s00111p00067270 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen evm_27.TU.AmTr_v1.0_scaffold00111.37 0.9277504025067314 58 AMTR_s00146p00080830 RNA biosynthesis.transcriptional activation.PHD finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00146.48 0.9275041755959583 78 AMTR_s00138p00029150 evm_27.TU.AmTr_v1.0_scaffold00138.10 0.9274738013274338 60 AMTR_s00137p00063430 GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00137.24 0.9269131680508594 61 AMTR_s00025p00243690 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase evm_27.TU.AmTr_v1.0_scaffold00025.377 0.9265641644667609 62 AMTR_s00024p00121650 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase evm_27.TU.AmTr_v1.0_scaffold00024.71 0.9259929978561818 63 AMTR_s00092p00069380 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP5/TAC12 component PTAC12, HMR, evm_27.TU.AmTr_v1.0_scaffold00092.35 0.9257648271374177 64 AMTR_s00009p00251110 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT6.2 protease TPP2, evm_27.TU.AmTr_v1.0_scaffold00009.258 0.9257588041813897 82 AMTR_s00197p00040880 Pentatricopeptide repeat-containing protein At2g30780 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00197.21 0.9255409286140278 66 AMTR_s00025p00149970 DNA damage response.DNA repair mechanisms.nonhomologous end-joining repair (NHEJ).LIG4-XRCC4 ligase complex.LIG4 DNA ligase component ATLIG4, LIG4, evm_27.TU.AmTr_v1.0_scaffold00025.169 0.9249538250964302 67 AMTR_s00010p00241770 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.plastidial glucanotransferase DPE1, evm_27.TU.AmTr_v1.0_scaffold00010.311 0.9249227114932476 99 AMTR_s00061p00215990 Cell cycle.mitosis and meiosis.chromosome segregation.centromere assembly and maintenance.WYRD inner centromere protein evm_27.TU.AmTr_v1.0_scaffold00061.279 0.9249155401607504 69 AMTR_s00049p00115800 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component SDG30, ATX2, evm_27.TU.AmTr_v1.0_scaffold00049.91 0.9248108147981526 86 AMTR_s00029p00245320 SMR domain-containing protein At5g58720 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.436 0.9247431250365805 71 AMTR_s00048p00132040 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana emb2004, evm_27.TU.AmTr_v1.0_scaffold00048.77 0.9246729546345276 72 AMTR_s00034p00133850 evm_27.TU.AmTr_v1.0_scaffold00034.40 0.9245677158613166 73 AMTR_s00087p00144100 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00087.47 0.924368111810267 74 AMTR_s00002p00269010 evm_27.TU.AmTr_v1.0_scaffold00002.545 0.9241824297514416 75 AMTR_s00024p00070750 evm_27.TU.AmTr_v1.0_scaffold00024.29 0.9240782758872623 76 AMTR_s00053p00190690 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Ino80 chromatin remodeling factor ATINO80, INO80, evm_27.TU.AmTr_v1.0_scaffold00053.139 0.9239161128136556 77 AMTR_s00003p00212560 emb1441, evm_27.TU.AmTr_v1.0_scaffold00003.204 0.9238041841692654 78 AMTR_s00066p00191280 Amino acid metabolism.degradation.branched-chain amino acid.acyl-CoA dehydrogenase oxidation.ETF-QO electron transfer flavoprotein-ubiquinone oxidoreductase ETFQO, evm_27.TU.AmTr_v1.0_scaffold00066.244 0.9233621247593752 79 AMTR_s00061p00182640 RNA processing.organelle machineries.ribonuclease activities.RNase E endoribonuclease RNEE/G, evm_27.TU.AmTr_v1.0_scaffold00061.204 0.9224291218372943 82 AMTR_s00029p00198530 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC3/TTN7 component TTN7, SMC3, evm_27.TU.AmTr_v1.0_scaffold00029.274 0.9220472793119712 83 AMTR_s00056p00185560 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.ECB2/VAC1 RNA editing factor VAC1, ECB2, ATECB2 0.9217544729913123 84 AMTR_s00009p00261910 Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.342 0.921654976047653 85 AMTR_s00009p00241130 Pentatricopeptide repeat-containing protein At5g14770, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.214 0.9215327749025715 86 AMTR_s00177p00048180 Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00177.25 0.9212760078137996 87 AMTR_s00066p00206210 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.282 0.9204999914671651 88 AMTR_s00062p00213230 Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana 0.920472913504657 89 AMTR_s00007p00201600 E3 ubiquitin-protein ligase listerin OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.177 0.9202988591756542 90 AMTR_s00007p00173730 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.KA120 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00007.136 0.9202323438373651 91 AMTR_s00029p00113670 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC3 promotor-binding component evm_27.TU.AmTr_v1.0_scaffold00029.124 0.9202228614378454 92 AMTR_s00097p00065910 evm_27.TU.AmTr_v1.0_scaffold00097.14 0.919615318368895 93 AMTR_s00025p00188660 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.helicase (SEN1) evm_27.TU.AmTr_v1.0_scaffold00025.230 0.9195919552672758 94 AMTR_s00066p00131520 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.125 0.9194966923870765 95 AMTR_s00039p00144340 evm_27.TU.AmTr_v1.0_scaffold00039.98 0.9191266136971584 96 AMTR_s00010p00247870 ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.340 0.9190066262205798 97 AMTR_s00066p00129430 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS3 CORVET-specific component evm_27.TU.AmTr_v1.0_scaffold00066.122 0.9185927456307709 98 AMTR_s00020p00234520 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease ATUBP5, UBP5, PDE323, evm_27.TU.AmTr_v1.0_scaffold00020.106 0.9185580560689904 99