Sequence Description Alias PCC hrr AMTR_s02193p00008230 Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold02193.1 0.9540374974231949 1 AMTR_s00055p00224220 Carbohydrate metabolism.starch metabolism.synthesis.starch branching enzyme EMB2729, BE1, evm_27.TU.AmTr_v1.0_scaffold00055.175 0.9410236495100383 2 AMTR_s00071p00072250 Probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.42 0.9361999202955096 6 AMTR_s00114p00128980 evm_27.TU.AmTr_v1.0_scaffold00114.59 0.9359129016661667 8 AMTR_s00031p00067070 Pentatricopeptide repeat-containing protein At5g03800 OS=Arabidopsis thaliana emb1899, EMB175, EMB166 0.9344508225319587 5 AMTR_s00004p00110090 Protein modification.phosphorylation.TKL kinase superfamily.LRR-VI kinase families.LRR-VI-1 kinase evm_27.TU.AmTr_v1.0_scaffold00004.89 0.9335674135803271 8 AMTR_s00122p00097060 Solute transport.carrier-mediated transport.BART superfamily.BASS family.BAT 2-keto acid transporter evm_27.TU.AmTr_v1.0_scaffold00122.40 0.9319111147220877 7 AMTR_s00099p00131860 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC4/Tau131 component evm_27.TU.AmTr_v1.0_scaffold00099.119 0.9314460276416705 25 AMTR_s00107p00082420 DEAD-box ATP-dependent RNA helicase 26 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00107.24 0.93125317818056 9 AMTR_s00062p00102370 Cell cycle.organelle machineries.DNA replication.DNA polymerase POP POLGAMMA2, evm_27.TU.AmTr_v1.0_scaffold00062.75 0.9312282388059944 10 AMTR_s00056p00047160 Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic OS=Arabidopsis thaliana EMB2083, evm_27.TU.AmTr_v1.0_scaffold00056.29 0.9294240446566644 11 AMTR_s00003p00177190 evm_27.TU.AmTr_v1.0_scaffold00003.153 0.9276722387201652 12 AMTR_s00059p00074580 evm_27.TU.AmTr_v1.0_scaffold00059.49 0.9265346024928626 13 AMTR_s00009p00236210 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP11/MURE component MURE, PDE316, ATMURE, evm_27.TU.AmTr_v1.0_scaffold00009.196 0.9260789304717291 14 AMTR_s00040p00213060 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic100 component emb1211, evm_27.TU.AmTr_v1.0_scaffold00040.228 0.924723513028521 36 AMTR_s00049p00210350 Putative pentatricopeptide repeat-containing protein At3g01580 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.234 0.924489190762024 16 AMTR_s00077p00031710 Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.15 0.924181159331037 17 AMTR_s00003p00233250 evm_27.TU.AmTr_v1.0_scaffold00003.233 0.9239259598769408 41 AMTR_s00110p00154620 Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana emb2458, evm_27.TU.AmTr_v1.0_scaffold00110.130 0.9233925673986222 58 AMTR_s00063p00172440 Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00063.53 0.9206947369186571 20 AMTR_s00079p00107040 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays EMB1865, evm_27.TU.AmTr_v1.0_scaffold00079.39 0.9191509744770048 21 AMTR_s00092p00164660 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-independent pathway.FANCD2 meiotic crossover formation factor evm_27.TU.AmTr_v1.0_scaffold00092.144 0.9190872837515947 42 AMTR_s00034p00235670 Cell cycle.organelle machineries.DNA replication.DNA gyrase complex.subunit B GYRB1, evm_27.TU.AmTr_v1.0_scaffold00034.119 0.9185774572806461 32 AMTR_s00033p00066570 RNA processing.RNA splicing.DBR1 intron-lariat-RNA degrading enzyme ATDBR1, DBR1, evm_27.TU.AmTr_v1.0_scaffold00033.28 0.9146258850311682 24 AMTR_s00038p00071780 Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.30 0.9138212400388642 25 AMTR_s00057p00182130 Acyl-CoA-binding domain-containing protein 6 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00057.193 0.912453885281036 36 AMTR_s00003p00263110 Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana 0.9123462572184216 36 AMTR_s00061p00182640 RNA processing.organelle machineries.ribonuclease activities.RNase E endoribonuclease RNEE/G, evm_27.TU.AmTr_v1.0_scaffold00061.204 0.9112411740974392 61 AMTR_s00029p00211750 RNA processing.organelle machineries.RNA modification.tRNA adenine deamination.chloroplast-tRNA adenosine deaminase TADA, ATTADA, evm_27.TU.AmTr_v1.0_scaffold00029.309 0.9112330993424905 32 AMTR_s00029p00159590 Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.192 0.9110753001960479 30 AMTR_s00003p00075520 Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GUN1, evm_27.TU.AmTr_v1.0_scaffold00003.43 0.910446904713043 31 AMTR_s00119p00135690 Cell cycle.organelle machineries.DNA replication.DNA gyrase complex.subunit A GYRA, evm_27.TU.AmTr_v1.0_scaffold00119.113 0.9101967937930375 87 AMTR_s00047p00175730 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP2/NOP14 assembly factor evm_27.TU.AmTr_v1.0_scaffold00047.99 0.9095030165607435 62 AMTR_s00028p00237040 DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00028.124 0.9081063046655626 94 AMTR_s00053p00190690 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Ino80 chromatin remodeling factor ATINO80, INO80, evm_27.TU.AmTr_v1.0_scaffold00053.139 0.9080807837426015 37 AMTR_s00009p00241540 RNA processing.organelle machineries.ribonuclease activities.RNase J endoribonuclease emb2746, evm_27.TU.AmTr_v1.0_scaffold00009.218 0.9071225904287321 36 AMTR_s00002p00244810 RNA processing.RNA modification.pseudouridylation.Pus10-type tRNA pseudouridine synthase evm_27.TU.AmTr_v1.0_scaffold00002.325 0.9070547918891709 37 AMTR_s00004p00261460 Probable protein S-acyltransferase 19 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.256 0.9064456564321061 61 AMTR_s00032p00071070 evm_27.TU.AmTr_v1.0_scaffold00032.43 0.9053722796575211 39 AMTR_s00053p00090700 Pentatricopeptide repeat-containing protein At3g13880 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00053.47 0.9051565584448814 40 AMTR_s04975p00003190 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC4/Tau131 component evm_27.TU.AmTr_v1.0_scaffold04975.1 0.9034000076166043 41 AMTR_s00003p00144440 Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.114 0.9018918791344215 42 AMTR_s00089p00111500 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-independent pathway.FAN1 endonuclease evm_27.TU.AmTr_v1.0_scaffold00089.62 0.9018375063504214 43 AMTR_s00011p00258380 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1, evm_27.TU.AmTr_v1.0_scaffold00011.182 0.901072727664486 45 AMTR_s00085p00102880 Disease resistance protein RPM1 OS=Arabidopsis thaliana RPP13, evm_27.TU.AmTr_v1.0_scaffold00085.63 0.9004971591978193 46 AMTR_s00113p00140210 RNA processing.organelle machineries.ribonuclease activities.PNP polynucleotide phosphorylase evm_27.TU.AmTr_v1.0_scaffold00113.32 0.9000431123629001 47 AMTR_s00100p00087410 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris evm_27.TU.AmTr_v1.0_scaffold00100.26 0.89987712329571 48 AMTR_s00078p00159930 evm_27.TU.AmTr_v1.0_scaffold00078.144 0.8989590695664371 51 AMTR_s00007p00152220 Nucleotide metabolism.purines.salvage pathway.AMP deaminase activities.membrane-associated AMP deaminase FAC1, ATAMPD, evm_27.TU.AmTr_v1.0_scaffold00007.112 0.898933936850814 52 AMTR_s00066p00084950 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.66 0.8982224785863542 94 AMTR_s00071p00070350 Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase ATKRS-1, evm_27.TU.AmTr_v1.0_scaffold00071.41 0.8978476066249127 67 AMTR_s00100p00051890 Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.granule-bound starch (amylose) synthase evm_27.TU.AmTr_v1.0_scaffold00100.11 0.8976031910523187 57 AMTR_s00013p00056220 MEI1, evm_27.TU.AmTr_v1.0_scaffold00013.19 0.8973002147825478 58 AMTR_s00175p00056960 Solute transport.carrier-mediated transport.APC superfamily.HAAAP-type aromatic amino acid transporter evm_27.TU.AmTr_v1.0_scaffold00175.29 0.8966797372295816 59 AMTR_s00001p00219300 Cytoskeleton.microfilament network.actin polymerisation.formin actin filament elongation factor activities.group-II formin AFH14, evm_27.TU.AmTr_v1.0_scaffold00001.227 0.8957492053836652 62 AMTR_s00068p00137340 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.RRP5 assembly factor evm_27.TU.AmTr_v1.0_scaffold00068.96 0.8956134847265508 63 AMTR_s00044p00032580 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP4/FSD3 component FSD3, evm_27.TU.AmTr_v1.0_scaffold00044.9 0.8951070932517613 64 AMTR_s00031p00037570 evm_27.TU.AmTr_v1.0_scaffold00031.7 0.8948593488622596 65 AMTR_s00061p00163460 Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.158 0.8947019942756478 66 AMTR_s00038p00151410 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO7 export karyopherin evm_27.TU.AmTr_v1.0_scaffold00038.92 0.894554497997359 74 AMTR_s00005p00204930 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component SYN3, ATRAD21.2, ATSYN3, evm_27.TU.AmTr_v1.0_scaffold00005.82 0.8942901625195888 70 AMTR_s00033p00208970 Carbohydrate metabolism.starch metabolism.degradation.phosphorylation.GWD glucan, water dikinase SEX1, SOP1, GWD, SOP, GWD1, evm_27.TU.AmTr_v1.0_scaffold00033.183 0.8941637540199328 71 AMTR_s00109p00045690 Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00109.32 0.8929573574612915 72 AMTR_s00092p00126260 evm_27.TU.AmTr_v1.0_scaffold00092.90 0.892881352960814 73 AMTR_s00012p00252410 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component MAR1, TOC75-III, evm_27.TU.AmTr_v1.0_scaffold00012.260 0.8924032199187528 74 AMTR_s00148p00046020 RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor ARF16, evm_27.TU.AmTr_v1.0_scaffold00148.24 0.8920953054009592 77 AMTR_s00016p00109400 evm_27.TU.AmTr_v1.0_scaffold00016.71 0.8916214001235759 78 AMTR_s00045p00210490 evm_27.TU.AmTr_v1.0_scaffold00045.287 0.8913390505247837 79 AMTR_s00006p00267510 Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis thaliana ATMBD9, MBD9, evm_27.TU.AmTr_v1.0_scaffold00006.303 0.8912037915335539 80 AMTR_s00045p00114550 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.CFM3-type splicing factor evm_27.TU.AmTr_v1.0_scaffold00045.110 0.8892399341161351 85 AMTR_s00189p00041140 Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.SSIV-type starch synthase ATSS4, SS4, SSIV, evm_27.TU.AmTr_v1.0_scaffold00189.6 0.8890310825095938 86 AMTR_s00007p00266290 evm_27.TU.AmTr_v1.0_scaffold00007.371 0.8879632773054181 90 AMTR_s00183p00020680 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.bifunctional 5-aminoimidazole-4-carboxamide RN transformylase and IMP cyclohydrolase evm_27.TU.AmTr_v1.0_scaffold00183.5 0.8874301282894073 94 AMTR_s00002p00252090 Pentatricopeptide repeat-containing protein At1g32415, mitochondrial OS=Arabidopsis thaliana 0.8871590281893597 95 AMTR_s00091p00075810 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00091.25 0.8864037242561971 96 AMTR_s00099p00030730 Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OTP85, evm_27.TU.AmTr_v1.0_scaffold00099.16 0.8852857727983123 98 AMTR_s00016p00225920 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst ATCYP20-2, CYP20-2, evm_27.TU.AmTr_v1.0_scaffold00016.208 0.8851276949682841 99 AMTR_s00009p00214080 Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.147 0.884937316616861 100