Sequence Description Alias PCC hrr AMTR_s00011p00266100 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor SIGB, SIG2, SIGA, SIG1, RPOD1, evm_27.TU.AmTr_v1.0_scaffold00011.228 0.9276100516519836 10 AMTR_s00122p00077720 Photosynthesis.photorespiration.glycerate kinase evm_27.TU.AmTr_v1.0_scaffold00122.28 0.9274429761480163 10 AMTR_s00130p00051210 evm_27.TU.AmTr_v1.0_scaffold00130.20 0.9260402906652665 5 AMTR_s00019p00208640 Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.251 0.9255698263052586 8 AMTR_s00099p00089660 evm_27.TU.AmTr_v1.0_scaffold00099.67 0.9228733800151795 8 AMTR_s00078p00035540 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) APX6, evm_27.TU.AmTr_v1.0_scaffold00078.14 0.9211120029029747 6 AMTR_s00004p00074570 evm_27.TU.AmTr_v1.0_scaffold00004.56 0.9210191012885139 7 AMTR_s00017p00253090 Protein modification.acetylation.sirtuin-type lysine deacetylase SRT2, AtSRT2, evm_27.TU.AmTr_v1.0_scaffold00017.263 0.9180943407950393 8 AMTR_s00007p00247090 evm_27.TU.AmTr_v1.0_scaffold00007.270 0.9167071019615334 9 AMTR_s00047p00218860 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.FLN2 regulatory factor FLN2, evm_27.TU.AmTr_v1.0_scaffold00047.167 0.9160309766846508 28 AMTR_s00021p00151130 evm_27.TU.AmTr_v1.0_scaffold00021.107 0.9105494112514525 23 AMTR_s00046p00227230 Uncharacterized protein At4g37920 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00046.167 0.9095531471383289 12 AMTR_s00058p00193720 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.LSF phosphoglucan phosphatase LSF1, evm_27.TU.AmTr_v1.0_scaffold00058.193 0.9078269942444125 17 AMTR_s00007p00259840 evm_27.TU.AmTr_v1.0_scaffold00007.320 0.9072909391281132 14 AMTR_s00002p00254720 Solute transport.channels.CorA family.MRS/MGT metal cation transporter MGT10, GMN10, MRS2-11, ATMGT10, evm_27.TU.AmTr_v1.0_scaffold00002.387 0.9068101892201211 17 AMTR_s00068p00029180 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.ZDS zeta-carotene desaturase PDE181, ZDS, SPC1, evm_27.TU.AmTr_v1.0_scaffold00068.6 0.9059330154424459 60 AMTR_s00106p00063870 evm_27.TU.AmTr_v1.0_scaffold00106.40 0.9038095136988117 27 AMTR_s00040p00143220 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M18 aspartyl aminopeptidase (DAP) evm_27.TU.AmTr_v1.0_scaffold00040.110 0.9019452810250815 18 AMTR_s00112p00086310 evm_27.TU.AmTr_v1.0_scaffold00112.21 0.9002189963682274 63 AMTR_s00031p00080280 Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00031.31 0.8999936971836007 20 AMTR_s00003p00268300 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.397 0.8975945886212141 50 AMTR_s00016p00187060 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.shikimate kinase ATSKL1, SKL1, evm_27.TU.AmTr_v1.0_scaffold00016.149 0.8950084710245636 23 AMTR_s00069p00135030 Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. indica evm_27.TU.AmTr_v1.0_scaffold00069.99 0.8943061419397941 24 AMTR_s00109p00113060 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.tocopherol cyclase (VTE1/TC) ATSDX1, VTE1, evm_27.TU.AmTr_v1.0_scaffold00109.111 0.8899999377547998 58 AMTR_s00011p00203340 GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00011.71 0.8892385966267548 48 AMTR_s00036p00115830 RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor AT-HSFA6B, HSFA6B, evm_27.TU.AmTr_v1.0_scaffold00036.48 0.8887902301807443 28 AMTR_s00040p00188540 Carbohydrate metabolism.starch metabolism.synthesis.starch branching enzyme SBE2.2, evm_27.TU.AmTr_v1.0_scaffold00040.184 0.8886865411653333 29 AMTR_s00103p00070570 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor AtcpRRF, HFP108, cpRRF, RRF, evm_27.TU.AmTr_v1.0_scaffold00103.36 0.888369563576917 39 AMTR_s00045p00149950 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00045.161 0.8878209918937727 49 AMTR_s00092p00149880 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.118 0.8874484920862864 33 AMTR_s00029p00206560 Uncharacterized protein At2g39920 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.297 0.8868660635357094 33 AMTR_s00117p00114400 Probable acyl-activating enzyme 16, chloroplastic OS=Arabidopsis thaliana AAE15, evm_27.TU.AmTr_v1.0_scaffold00117.48 0.8841522888131902 57 AMTR_s00032p00234570 Protein SMG7L OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.265 0.8829296498299537 37 AMTR_s00048p00222810 evm_27.TU.AmTr_v1.0_scaffold00048.208 0.8827715293500212 44 AMTR_s00006p00262340 Polyamine metabolism.putrescine.synthesis.plastidial/nuclear pathway.agmatine iminohydrolase ATAIH, EMB1873, evm_27.TU.AmTr_v1.0_scaffold00006.241 0.8815207135221328 39 AMTR_s00002p00110970 evm_27.TU.AmTr_v1.0_scaffold00002.68 0.8811983648944368 40 AMTR_s00045p00200960 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA1 protein LPA1, evm_27.TU.AmTr_v1.0_scaffold00045.260 0.8798290886933916 42 AMTR_s00008p00166810 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.isoamylase-type enzyme ATISA3, ISA3, evm_27.TU.AmTr_v1.0_scaffold00008.90 0.8794606346378875 84 AMTR_s00024p00130820 evm_27.TU.AmTr_v1.0_scaffold00024.77 0.8775572574573788 79 AMTR_s00088p00179990 Solute transport.carrier-mediated transport.DMT superfamily.UmamiT-type solute transporter evm_27.TU.AmTr_v1.0_scaffold00088.159 0.8761601344317006 45 AMTR_s00092p00157010 Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.132 0.8761516101470957 72 AMTR_s00018p00028320 Peroxidase 5 OS=Vitis vinifera RCI3, RCI3A, evm_27.TU.AmTr_v1.0_scaffold00018.5 0.8753934607751351 48 AMTR_s00065p00179810 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein CLPB4, CLPB-M, HSP98.7, evm_27.TU.AmTr_v1.0_scaffold00065.151 0.8742358065797758 49 AMTR_s00011p00231930 Pheophytinase, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00011.113 0.8725679221273309 53 AMTR_s00066p00167590 Thioredoxin-like fold domain-containing protein MRL7, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.192 0.8723834276409641 72 AMTR_s00269p00014640 Protein modification.protein folding and quality control.protein folding catalyst activities.Parvulin peptidyl-prolyl isomerase evm_27.TU.AmTr_v1.0_scaffold00269.5 0.8720945131977523 55 AMTR_s00029p00225980 Solute transport.carrier-mediated transport.MFS superfamily.PHT4 phosphate transporter ANTR2, PHT4;4, evm_27.TU.AmTr_v1.0_scaffold00029.352 0.8713380238063364 92 AMTR_s00048p00030920 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo assembly.RAF2 assembly factor evm_27.TU.AmTr_v1.0_scaffold00048.6 0.8702528063442044 61 AMTR_s00070p00197870 Solute transport.channels.VIC superfamily.voltage-gated potassium cation channel (AKT/SKOR/GORK-type) AKT3, AKT2/3, AKT2, KT2/3, evm_27.TU.AmTr_v1.0_scaffold00070.132 0.8701481002161258 58 AMTR_s00413p00010550 CP5, evm_27.TU.AmTr_v1.0_scaffold00413.1 0.8693690682125149 61 AMTR_s00090p00120760 RNA processing.ribonuclease activities.RNase Z endoribonuclease CPZ, TRZ2, evm_27.TU.AmTr_v1.0_scaffold00090.59 0.8693441560379639 73 AMTR_s00078p00073300 evm_27.TU.AmTr_v1.0_scaffold00078.44 0.8682480890519437 64 AMTR_s00006p00243670 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00006.123 0.8668651605227927 88 AMTR_s00149p00064300 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase BGLU12, evm_27.TU.AmTr_v1.0_scaffold00149.41 0.8660053081263895 70 AMTR_s00061p00169610 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00061.177 0.8655295810162464 96 AMTR_s00066p00107860 Thioredoxin-like fold domain-containing protein MRL7L, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.94 0.863622896667527 76 AMTR_s00130p00027180 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00130.6 0.8603320733068421 86 AMTR_s00085p00110520 evm_27.TU.AmTr_v1.0_scaffold00085.68 0.8600469221278579 88 AMTR_s00049p00119540 Redox homeostasis.chloroplast redox homeostasis.F-type thioredoxin ATF1, TRXF1, evm_27.TU.AmTr_v1.0_scaffold00049.94 0.858547525089258 95 AMTR_s00203p00014010 Disease resistance protein RFL1 OS=Arabidopsis thaliana RFL1, evm_27.TU.AmTr_v1.0_scaffold00203.3 0.8580375334686186 95 AMTR_s00069p00149060 evm_27.TU.AmTr_v1.0_scaffold00069.116 0.8572734359728338 96 AMTR_s00010p00223650 Uncharacterized protein At4g37920 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.245 0.8569506333152449 97 AMTR_s00140p00103640 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL9 component RPL9, evm_27.TU.AmTr_v1.0_scaffold00140.50 0.8552261375686704 100