Heatmap: Cluster_120 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots (apex), 7 DAG
Roots (differentation zone), 4 DAP
Roots (elongation zone), 4 DAP
Roots (meristematic zone), 4 DAP
Roots (stele cells), 7 DAS
Roots (tip)
Leaves (rosette), 21 DAG
Leaves (rosette), 29 DAG
Leaves (rosette), 35 DAG
Leaves (rosette), 42 DAG
Leaves (rosette), 57 DAG
Epidermis cells
Mature guard cells
Stems (internode)
Stems (internode), senescent
Meristem (M1-3), 7-9 DAG
Meristem (M4-6), 1-12 DAG
Meristem (M7-1), 13-16 DAG
Axis of the inflorescence
Pedicel
Flowers (receptacles)
Flowers (floral buds)
Flowers (sepals)
Flowers (petals)
Flowers (stamen filaments)
Flowers (anthers)
Flowers (carpels)
Flowers (ovules)
Stigmatic tissues
Pollen
Siliques
Siliques, senescent
Pods of Siliques
Pods of Siliques, senescent
Embryo
Endosperm
Seeds, dry
Seeds, from senescent siliques
Seeds, young
Seeds, germinating
Seedlings, 5 DAG
Seedlings, 11 DAG
Seedlings, 14 DAG
Seedlings, etiolated
0.59 1.85 0.41 -0.62 -0.25 -1.01 -1.54 0.4 1.03 0.79 0.9 0.36 1.36 0.0 0.81 -1.68 -1.1 -0.68 -0.76 -1.09 -0.74 -0.42 -0.36 1.34 1.58 -2.1 0.03 0.15 -0.86 -3.62 -0.81 -2.32 -0.85 -1.81 -1.61 -1.51 -3.35 -3.13 0.15 -0.52 -0.78 -1.6 -0.06 1.24
AT1G08720 (EDR1)
-0.61 0.33 -0.61 -0.26 0.9 -1.31 -0.99 0.7 1.39 1.59 1.28 1.2 -0.29 0.77 1.78 -1.35 -0.95 -0.72 -0.53 -0.61 0.12 -1.0 -0.21 -0.21 -0.98 -1.74 0.17 0.06 -0.11 - -0.14 -1.89 0.06 -0.1 -0.1 -0.37 -1.8 -2.4 -0.43 -0.73 -0.69 -1.15 0.18 -0.16
AT1G21210 (WAK4)
3.6 -2.77 -3.78 - 2.97 - -4.09 -0.52 2.47 2.24 2.27 - - -0.63 1.36 - -3.07 -5.95 - - -3.53 - -4.8 -3.7 - -1.85 -1.27 - - - -6.79 - -3.69 -2.66 0.11 0.47 -2.53 - -5.0 -1.55 -3.54 - -1.57 -3.38
AT1G21230 (WAK5)
5.46 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.59 1.7 -0.27 -0.7 - -0.94 -1.6 -0.17 0.33 0.2 0.34 -1.15 0.6 0.11 1.62 -0.67 -0.15 0.29 -0.06 -0.3 1.23 -0.57 0.11 -0.01 -0.69 -1.38 0.08 -0.43 0.12 - -1.05 -0.21 -0.87 1.67 -0.51 0.98 -0.2 -0.91 -1.74 -0.76 -2.27 -1.23 -0.37 0.41
1.48 1.92 1.14 0.14 1.83 0.01 -0.57 -0.23 1.09 1.05 0.78 -1.97 -1.53 -0.58 -0.45 -1.33 -0.75 -0.52 0.01 0.09 -0.02 -0.02 -0.09 -0.86 -0.87 -1.03 -0.29 -0.51 -0.86 -1.21 -0.66 -3.36 -0.53 -0.3 -0.78 -0.91 -4.03 -3.65 -0.35 -0.0 -1.29 0.17 -0.01 0.64
4.88 - - - - - - - - - - - - - - - -1.98 - - - - - - - - - -3.14 - - - - - - - - 0.98 - - - -2.47 3.45 - - 0.07
2.02 1.66 1.52 2.83 2.36 1.78 -4.25 -4.33 -2.96 -2.65 -2.27 - -4.7 -6.09 0.19 -3.94 -4.48 -5.38 - -6.07 -4.45 - - -6.15 - - -3.49 - -4.63 - -2.7 0.52 -2.54 -4.49 -0.15 -2.82 -0.17 0.88 -6.45 1.42 -0.45 -1.78 0.26 2.49
1.9 1.41 0.03 2.1 - 0.62 -6.08 -2.32 0.3 0.6 0.15 - - -0.4 1.39 1.36 1.42 1.59 0.33 -1.58 -1.61 -2.55 -1.85 - - -3.82 -1.62 -2.99 0.2 - -3.88 -1.14 -3.6 -4.6 0.04 -4.59 -2.88 -0.98 -3.8 0.59 -1.74 -2.26 0.0 2.48
0.46 -0.34 - - - - - - - -0.86 2.48 1.47 - - 0.39 - -3.87 - - - -1.53 0.82 - - 3.08 -2.66 0.09 -1.22 0.63 - -0.77 - -1.3 - -1.05 -1.16 - - 1.7 - 0.74 - 3.06 1.37
0.51 1.3 0.49 -1.65 - -1.45 -1.31 0.15 0.05 0.02 0.05 -1.79 -4.42 1.47 -0.02 0.59 0.08 0.3 1.13 0.35 0.4 1.65 -0.37 -0.0 0.2 0.52 0.51 0.43 -2.31 - -0.34 -3.31 -0.78 0.55 -4.43 -0.63 - -6.4 0.4 -0.65 -0.68 -0.03 1.02 0.1
4.25 0.13 - - - - - - -0.89 0.23 1.63 3.25 - - 0.78 -0.82 -4.21 - - - - - - - - - - - - - -4.3 - - - - - - - - - 1.02 - 2.17 -0.63
4.41 - - - - - - - -1.42 1.73 0.43 - - - 0.61 - 0.72 - - - - - - - - - - - - - - - - - - - - - - - 2.1 - 3.06 0.97
4.06 0.89 - - - - -2.43 - -0.24 0.12 0.51 - - - -2.14 - - - - - - - - - - -2.04 - - - - - - - - - -2.45 - - - 2.53 1.49 0.01 1.46 3.15
-0.32 0.51 -0.0 -0.8 0.54 -0.82 -1.81 -0.36 1.51 1.42 1.31 0.39 -0.16 -0.0 0.58 -0.64 -0.29 0.11 -0.86 -1.02 0.77 -0.32 0.34 0.29 -0.55 -0.94 0.47 0.21 0.09 -9.17 -0.04 -0.91 0.06 0.97 0.23 -0.42 -1.01 -1.3 -0.05 -0.71 -1.45 -1.74 -0.37 -0.54
0.08 0.3 0.07 -0.55 1.16 -1.29 -1.09 0.38 0.64 0.75 1.03 -1.12 -1.0 -0.11 1.83 -0.7 -0.44 -0.24 -0.3 -0.23 0.35 0.27 -0.33 -0.19 -0.5 -1.55 0.3 0.23 -0.46 - -0.49 -0.79 -0.29 1.45 -0.7 -0.18 -0.83 -1.36 -0.12 -0.56 -1.12 0.07 0.19 0.12
1.24 1.91 -0.11 0.27 -3.75 -0.59 -0.23 -0.86 -0.38 -0.93 -0.67 -0.76 -6.13 -0.12 -1.45 -0.73 -2.42 -3.15 -3.91 -2.55 -0.51 -1.0 0.75 0.18 1.14 0.46 0.13 -0.17 -1.43 -0.15 0.19 -1.86 0.72 0.73 1.84 -2.65 -4.67 -3.61 -0.23 0.65 0.46 -1.01 1.43 1.16
4.59 3.04 1.8 - - -0.42 - - - - - - - - - - - - - - - -3.15 - - - - 0.12 -4.18 - - - - - - - -6.19 - - -5.28 -1.91 -1.65 - -1.04 2.36
AT2G34180 (WL2)
2.01 0.86 0.6 1.71 3.69 0.39 -0.99 -0.23 -2.09 -3.05 -1.26 -2.83 - -2.69 - -3.06 -2.27 -2.3 -1.73 -0.8 -1.99 -1.11 0.23 1.15 -2.76 -2.81 -1.43 -2.0 -2.07 -3.46 -0.38 -5.54 -0.22 -4.35 1.67 -0.63 -3.69 -4.73 -2.15 -0.75 -0.12 -0.75 0.43 -0.68
0.47 -0.15 0.63 0.57 2.9 -0.01 -1.52 -2.66 -3.76 -3.63 -3.38 -0.41 -2.2 0.7 -2.12 0.24 0.76 1.07 0.25 -0.01 -0.35 0.96 -0.92 0.09 0.22 -1.42 0.73 0.44 -1.38 - -0.37 -5.89 -0.93 -3.9 1.83 -0.5 -5.5 -5.2 -0.11 -1.26 -1.32 0.17 -0.35 -0.17
AT2G48010 (RKF3)
-0.4 0.44 0.61 -0.9 0.09 -0.24 -1.98 0.8 1.04 1.12 1.23 -2.67 -2.51 -0.55 2.33 -1.63 -1.21 -0.88 -1.87 -1.55 -0.78 -1.37 0.62 0.91 0.71 -1.78 0.0 0.01 -1.07 - -0.51 0.04 -0.57 -0.32 0.14 1.61 0.02 -0.52 -0.46 -0.5 -0.94 -2.46 -0.65 -0.44
AT3G06370 (NHX4)
1.77 2.48 1.03 -3.1 1.91 -2.98 -0.43 -2.31 -3.47 -3.71 -3.37 - -1.53 2.95 0.63 0.41 -0.84 -1.71 1.2 0.76 0.32 -1.95 -3.33 -1.45 -1.16 -3.16 -2.62 -5.09 -5.83 - -0.44 -2.66 -0.76 -2.0 -3.71 - -3.56 -4.73 -4.42 -0.19 0.66 -0.98 0.72 1.38
AT3G14570 (GSL04)
1.35 0.57 1.07 -0.78 - -0.14 -0.11 -1.76 -3.46 -4.27 -3.39 -2.76 - 0.83 -0.6 -1.06 -1.38 -0.85 0.32 -0.29 1.07 0.79 -0.49 1.53 0.62 0.32 0.9 1.63 -2.36 -2.27 0.81 -4.43 0.07 -0.81 -2.88 1.41 - -5.14 1.8 -1.41 -0.92 -0.81 0.59 -0.78
-0.85 0.56 -0.08 -0.53 -4.32 -1.17 -1.23 0.31 1.08 1.15 1.2 -1.0 -1.29 -0.75 0.6 -1.09 -0.82 -0.33 -0.74 -0.72 0.45 0.46 -0.22 -0.4 -0.78 0.51 0.42 0.67 -0.45 - -0.29 -0.28 -0.23 1.43 -0.11 0.7 0.68 -0.63 0.33 -0.47 -1.24 -0.35 0.23 0.17
2.06 3.23 2.33 2.55 - 0.39 -4.95 -0.53 -3.46 -4.85 -4.33 - - -2.06 -4.88 2.26 1.07 0.09 -2.37 -5.66 -3.1 -4.82 -5.64 - -6.93 -1.7 -1.89 -4.71 - - -3.16 -6.68 -4.67 -8.08 0.2 -4.73 - -7.25 -5.73 0.82 0.77 -1.37 -0.22 1.02
4.24 -0.77 0.61 2.25 - -0.49 - - - - - - - - - - - 0.65 - - - - - - - -1.14 -3.51 - - - -0.76 - - - 3.42 -2.68 - - - 1.18 -1.44 -0.65 -0.9 -2.57
3.58 - - 2.47 - - - - - - - - - - - - -1.23 0.59 - - - - - - - 0.08 - - - - - 1.81 - - - 3.22 3.42 - - - - - - -
2.97 4.48 -0.71 -1.34 - -3.79 - - 0.38 0.36 1.93 - - - - - - - - - - - -2.49 - - - - - - - - - - - - -3.93 - - - 1.37 -2.94 - -0.37 1.43
1.99 1.77 1.35 - - - - - - - - - - - - - - - - - - - - - - 0.4 - - - - - 2.37 - 4.72 - - - - - -0.71 - - - -0.75
AT3G46330 (MEE39)
5.13 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -4.18 1.07 -1.59 -1.25 2.62
-1.34 -0.13 -0.98 -0.1 - -1.5 -1.26 0.19 2.34 2.12 2.44 -0.59 -1.02 0.23 -0.07 -1.7 -0.8 -0.03 -0.38 -0.18 0.77 -0.38 -0.92 -1.91 -1.2 -1.92 0.35 0.66 -0.03 - -0.86 -4.67 -0.7 -1.06 0.33 0.55 -0.88 -2.42 0.68 -2.09 -0.97 -0.27 -0.32 -0.35
AT3G47790 (ATH7)
-0.41 -0.04 - - - - - - -0.76 2.01 0.89 1.4 - - -0.98 - - - - - -2.84 - - - - -3.07 - -2.51 - - -5.06 - - -0.98 - 3.81 - -0.11 - - -3.52 -0.51 3.97 -1.98
0.39 0.86 0.37 1.34 - 0.03 -1.11 -1.03 -1.22 -1.45 -1.53 -3.16 -5.13 0.71 -0.54 -0.28 -0.66 -0.65 0.97 -0.09 0.28 0.98 0.58 -0.59 0.7 -0.74 1.2 2.25 -2.25 - -0.61 -2.47 -0.45 -0.67 1.27 -1.97 -2.47 -3.17 0.94 0.11 -0.89 -0.16 -0.02 0.1
AT3G55370 (OBP3)
1.26 2.19 1.73 0.62 - 0.56 -0.84 -1.68 -0.84 -1.49 -1.37 -5.97 - 1.39 0.39 0.68 0.03 -0.07 0.44 0.48 -0.35 -0.8 -0.53 -0.8 0.51 -1.18 0.49 -0.06 -3.54 - -0.62 -2.34 -0.43 -0.09 0.22 -2.9 -3.21 -4.51 -0.97 0.46 0.11 -0.96 0.88 1.03
AT3G59100 (gsl11)
1.2 0.92 0.59 0.22 -5.2 -0.65 -0.32 -1.74 -1.55 -1.78 -1.45 -2.03 -4.02 1.16 -0.91 0.32 0.63 1.19 1.34 1.02 0.73 0.49 0.48 -0.11 -0.37 -0.12 0.82 0.27 -2.21 - -0.2 -3.95 -0.33 -0.56 0.01 0.63 - -6.42 0.72 0.13 -0.63 0.02 0.02 0.03
4.99 2.65 - - - - - - - - - - - - -1.93 - - - - - - - - - - -3.85 - - - - - - - - - -1.46 - - - -1.33 -0.5 - - 2.06
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.16 - - - - - - - 3.06
3.5 4.1 2.62 - - -0.75 - - - - - - - - - 1.3 -0.96 -3.21 - - - - - - - -3.72 - - - - - - - - - - - - - 0.35 -1.19 - 0.65 1.27
0.97 0.5 - - - - - - - - -3.42 - - - - - -5.58 - - - - 0.87 - - -2.87 5.06 - - - - -7.63 - - - - - - - -6.44 -2.43 -1.69 - -2.0 2.14
2.58 4.28 1.21 0.91 - 0.24 -4.54 -4.6 -4.21 -5.61 -4.16 -4.97 - -1.47 -3.63 -1.54 -1.0 -0.96 -1.04 -1.71 -2.31 -2.44 -3.28 -3.62 -5.54 -2.44 -1.75 -1.25 -2.87 -2.94 -2.64 -1.41 -3.63 -5.21 1.03 -2.33 -2.07 -1.55 -1.13 0.43 -1.21 -4.07 -0.85 1.23
-0.61 0.22 0.34 -0.67 -0.42 -0.71 -1.28 0.2 0.98 1.08 1.05 -2.21 -1.2 -0.45 0.03 -1.23 -0.9 -0.57 -0.7 -0.72 -0.14 -0.14 -0.36 0.9 0.93 -0.72 0.26 0.5 2.71 -4.53 -0.8 -1.02 -0.74 0.6 -0.16 -0.33 -1.16 -1.35 -0.01 -0.56 -1.25 -1.59 -0.42 -0.18
1.99 2.24 2.36 1.12 4.17 0.77 -4.83 -2.71 -1.86 -2.31 -1.91 -1.33 -3.61 -6.15 -4.9 -2.12 -5.05 -3.71 -3.45 -3.82 -4.01 -2.23 -5.62 -2.1 -1.32 -2.4 -2.39 -1.45 -5.71 -4.06 -4.02 -6.32 -4.89 -4.57 -1.73 -2.64 -2.89 -5.47 -1.49 -0.9 -1.44 -3.37 -0.8 0.96
1.98 3.15 2.79 0.02 3.33 -0.05 -3.15 -3.67 -3.26 -2.87 -3.2 -4.2 - -2.57 -2.24 -1.64 -4.29 -3.85 -3.36 -2.28 -1.22 -0.15 -2.95 -3.73 -0.34 -1.26 -0.87 -1.14 - -5.31 -3.87 -3.98 -3.8 -0.48 - - -4.86 - -3.39 0.04 -0.47 -2.81 -1.0 1.71
3.26 2.69 2.45 -1.11 - 1.42 -5.29 -6.57 -0.72 0.9 1.13 -6.16 - -5.37 -0.4 -3.85 -5.59 -7.69 - - -3.1 -0.35 - - - 1.34 -4.41 -1.93 - 1.9 -5.58 - -6.84 -2.7 - -2.41 - - -4.52 1.01 -0.93 -5.39 0.19 1.1
AT4G35390 (AGF1)
1.62 0.93 2.24 1.65 3.81 1.67 -3.98 -5.26 -4.46 -4.45 -5.32 - - -1.74 -3.91 -3.36 -2.81 -1.0 -1.6 -3.16 -1.7 -2.37 -4.27 -4.17 -3.51 -4.5 -2.22 -1.14 -6.36 - -3.12 0.41 -3.89 -4.4 1.71 -3.5 1.06 -0.01 -2.53 -0.19 -0.75 -4.21 -1.27 -0.6
0.41 0.02 0.12 -1.43 0.74 -1.2 -1.73 -0.01 1.9 1.89 1.7 -1.64 -1.09 0.12 0.48 -0.69 -0.78 -0.61 -0.75 -0.72 -0.32 -0.48 -0.21 0.38 0.51 -0.47 0.1 -0.98 -1.07 -0.83 -0.01 -1.46 0.06 0.26 0.01 0.84 -1.61 -1.77 -0.72 -0.63 -0.37 -1.08 -0.74 0.28
AT5G01712 (CPuORF48)
1.01 0.03 -0.43 -2.03 0.61 -1.01 -1.32 0.04 2.06 1.89 1.82 -5.08 -5.29 0.52 0.24 -1.04 -0.45 -0.17 -0.3 -0.4 -0.23 -3.26 -0.25 0.54 0.61 -0.57 -0.41 -0.79 -1.24 -1.13 0.11 -0.72 0.02 0.75 -0.37 -0.78 -2.44 -0.9 -0.43 0.14 -0.88 -2.96 -0.55 0.51
AT5G07390 (RBOHA)
3.25 4.64 1.27 -3.8 - - - -5.45 -2.21 -2.41 -2.48 -4.29 - - - - - - - - -1.89 - - - - -4.53 -4.36 - - - -7.53 - -6.42 -3.53 -4.22 0.79 -1.68 - -6.76 -0.7 -2.62 - 0.32 0.9
AT5G11180 (GLR2.6)
4.57 1.66 0.1 - - - - - - -2.23 -2.39 - - - 0.17 - - - - - - - - - - - -3.57 - - - -3.63 - - - - -1.82 -1.27 - - -1.66 -0.59 - - 3.66
AT5G20960 (AO1)
1.45 1.46 1.25 0.49 -9.15 0.14 -5.11 -5.96 -4.94 -2.81 0.18 -3.05 1.04 -2.76 1.61 -2.07 -3.05 -4.62 -9.3 -7.94 -3.79 -5.4 -7.05 - -9.23 -9.72 -5.2 -8.33 -0.4 - -5.87 2.8 -6.48 -2.86 -5.65 -2.45 3.14 2.7 -8.02 -0.39 -1.4 -2.68 -0.59 -0.04
1.8 4.99 1.76 - - -3.97 - - - - - - - - - - - - - - - - - - - -5.96 - - - - - - - - - - - - - -0.32 -3.43 -3.16 -1.4 1.98
AT5G41992 (CPuORF58)
0.5 0.92 -0.29 -1.46 -2.2 -1.52 -2.44 -0.32 -0.57 -0.63 -0.53 -2.67 -1.81 0.67 -0.15 -0.28 -0.31 0.01 -0.67 -0.52 0.32 0.75 0.35 0.65 0.47 2.21 -0.52 -0.08 0.61 1.66 -0.31 -0.47 -0.59 0.9 -1.68 -1.92 -2.94 -0.8 -0.3 0.29 -1.41 -0.7 -0.65 0.94
4.01 3.57 - - - - - - - - - - - - - - - - -0.36 -1.58 - - - - - -3.45 - - - - - - - - - -3.41 - - - 2.76 0.46 -2.4 -1.06 2.54
2.91 2.55 -2.71 - - - -0.48 -4.25 - - - - - 1.44 - -0.25 -1.36 -2.83 0.45 -0.65 0.08 1.05 -2.57 - - - -3.74 - - - -1.65 - -1.63 - - -4.67 - - -2.91 2.09 0.04 0.74 1.35 3.31
AT5G52350 (EXO70A3)
4.95 - - 3.27 - - - - - - - - - - 1.8 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
AT5G63770 (DGK2)
-0.12 -0.16 0.04 -0.76 0.73 -0.64 -1.07 -1.35 1.79 2.62 1.54 -0.69 -3.11 1.89 0.78 -1.49 -1.23 -1.15 -1.1 -1.28 -0.44 -0.2 -1.16 -0.57 -0.42 0.28 -0.38 -0.38 -0.07 0.27 -0.77 -3.25 -0.82 -0.75 -0.79 1.08 -4.54 -4.05 -0.4 -0.63 -1.27 -1.18 -0.94 -0.35

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.