Heatmap: Cluster_113 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.56 0.41 0.03 0.26 0.13 0.06 0.26 0.52 0.66 0.55 0.72 0.76 0.12 -2.19 -1.33 -1.83 -1.19 -0.45 -0.44 -0.86 -1.49 -0.18 0.26 0.33 -0.03 -0.5
-0.19 -0.21 0.12 0.25 0.34 0.24 -0.16 -0.22 0.04 0.24 0.55 0.6 0.21 -0.39 -0.18 0.12 -0.22 -0.3 -0.33 -0.13 -0.82 -0.11 0.34 -0.21 -0.29 -0.19
0.17 -0.12 0.2 0.39 0.49 0.56 0.48 0.47 0.58 0.48 0.34 0.22 0.22 -1.35 -1.01 -0.77 -0.71 -0.26 -0.34 -0.29 -1.07 -0.19 0.16 -0.26 -0.45 -0.38
0.3 -0.1 -0.45 -0.63 -0.54 -0.57 -0.2 -0.19 0.08 0.3 0.56 0.85 0.32 0.12 -0.44 0.69 0.15 -0.25 -0.16 -0.27 -0.38 -0.87 0.45 0.71 -0.77 -0.94
0.44 0.11 0.23 -0.12 -0.34 -1.05 -0.45 -0.14 -0.25 0.23 0.75 1.16 0.82 -1.57 -0.9 -1.43 -1.91 -0.78 -0.42 -1.13 -2.52 -2.15 1.32 1.02 0.14 0.61
-0.11 -0.37 -0.13 -1.02 -1.5 -1.61 -0.85 -0.25 0.51 0.8 1.15 1.18 0.5 -0.53 -0.49 -0.6 -2.28 -1.04 -0.96 -0.99 -1.65 -0.31 1.19 1.07 0.76 -0.35
0.55 -0.17 -0.44 -0.23 -0.52 -0.44 -0.41 -0.21 -0.01 0.38 0.67 0.87 0.68 -1.5 -0.96 -1.6 -1.3 -0.15 -0.22 -1.15 -1.62 -0.86 1.15 1.31 0.28 0.1
0.76 0.75 0.3 0.61 0.55 0.39 -0.04 0.33 0.48 0.59 0.99 1.09 0.19 -2.18 -1.84 -3.61 -0.98 -0.12 -0.3 -0.01 -5.14 -2.53 -0.9 0.01 -0.82 -0.77
0.6 0.3 -0.08 -0.17 -0.06 -0.13 -0.1 0.32 0.68 1.13 1.45 1.37 0.48 -2.17 -1.85 -1.94 -1.01 -1.38 -1.43 -0.49 -2.46 -3.7 0.48 0.34 -0.92 -0.52
0.73 0.28 -0.36 -0.69 -0.99 -1.14 -0.37 -0.09 0.19 0.35 0.62 0.82 0.7 -0.66 -0.82 0.56 0.08 0.0 -0.36 -0.26 -0.87 -1.04 0.85 0.38 -0.54 -0.92
0.3 -0.33 0.14 0.14 0.1 0.09 0.18 0.22 0.57 0.37 1.23 1.32 0.71 -0.65 -0.64 -0.27 -0.75 -1.24 -0.34 -0.2 -2.53 -2.69 0.21 -0.51 -0.41 -1.5
0.58 -0.12 -0.12 -0.09 0.73 0.59 0.24 0.48 0.56 0.52 0.25 1.08 0.86 -0.51 -1.81 -2.35 -1.13 -0.23 -0.67 -1.78 -1.91 0.02 0.66 -1.23 -0.94 -0.45
0.47 -0.11 -0.56 -0.74 -0.67 -0.44 -0.3 -0.21 0.1 0.32 0.71 0.98 0.79 0.66 -0.46 0.51 0.58 -0.77 -0.82 -0.65 -1.43 -1.16 0.01 0.35 -0.22 -0.42
0.01 0.05 0.06 -0.08 0.49 0.38 0.01 -0.26 -0.05 0.16 0.54 0.76 0.36 0.02 -0.86 -1.16 -1.03 -0.93 -0.35 -0.82 -1.25 0.39 0.97 0.07 -0.48 0.11
-0.32 -0.53 -0.79 -0.75 -0.68 -0.54 -0.34 -0.56 0.47 0.31 0.78 0.77 -0.31 -0.01 -0.21 -0.77 -0.76 -0.06 0.05 -1.13 -1.02 -1.81 0.98 1.51 0.35 0.42
0.23 0.41 0.07 -0.35 -0.21 -0.55 -0.55 -0.64 0.0 0.85 0.85 1.45 -0.02 -1.63 -1.41 -1.31 -1.3 -0.14 -0.19 -0.51 -1.91 -2.91 1.53 0.88 -1.45 -0.04
0.06 -0.2 -0.54 -0.73 -0.56 -0.37 -0.08 -0.07 0.15 0.46 0.5 0.61 0.23 0.05 -0.4 0.35 0.46 0.06 0.06 0.16 -1.1 -1.05 0.42 0.6 -0.66 -0.41
0.57 -0.06 -0.15 -0.34 -0.08 0.1 -0.13 0.03 0.39 0.51 0.93 1.06 0.81 -0.66 -0.7 -0.06 -0.42 -1.07 -0.71 -0.7 -2.07 -0.91 0.8 0.46 -1.15 -1.17
0.24 -0.33 -0.5 -0.56 -0.94 -1.27 -0.88 -0.73 -0.01 0.55 1.01 1.28 0.5 -0.21 -0.95 0.63 0.64 -0.42 -0.25 -0.15 -3.02 -0.34 0.48 0.75 -0.47 -0.89
0.57 -0.17 -0.63 -0.54 -0.52 -0.63 -0.13 -0.06 -0.34 -0.2 0.28 0.95 0.72 -0.89 -1.05 0.26 0.05 -0.11 -0.84 -0.71 -0.84 -0.78 0.99 0.79 0.82 -0.62
0.85 0.03 -0.33 -0.43 -0.28 -0.16 -0.01 0.04 -0.07 -0.14 0.34 0.98 0.89 -0.67 -0.7 0.35 0.24 -0.5 -0.45 -0.51 -1.39 -1.11 0.42 0.39 0.15 -0.98
0.7 -0.39 -0.73 0.34 0.6 -0.41 -0.51 -0.43 -0.38 0.72 1.17 1.34 0.54 -3.19 -3.35 -3.59 -2.2 -2.31 -2.4 -1.53 -2.86 0.31 1.32 1.37 -0.43 -0.09
0.15 0.04 -0.24 -0.15 -0.98 -0.4 -0.54 -0.36 0.69 0.57 0.87 1.23 -0.28 -0.83 -0.54 -0.65 -0.29 -0.55 -0.26 -1.54 -1.29 -3.0 1.45 0.43 0.36 -0.25
0.23 0.19 -0.2 -0.62 -0.73 -0.34 -0.12 0.05 0.33 0.41 0.55 0.69 0.29 -0.44 -0.57 0.41 -0.21 -0.2 -0.2 -0.31 -0.06 -0.73 0.63 0.62 -0.61 -1.05
-0.31 -0.54 -0.43 -0.15 0.14 0.28 -0.11 -0.37 0.08 0.27 0.68 0.91 -0.09 -0.09 -0.26 -0.45 -1.14 -1.64 -1.26 -1.29 -0.64 0.08 1.07 0.96 0.04 0.38
0.87 0.48 0.02 0.01 -1.02 -0.64 -0.12 0.09 0.49 0.59 0.91 0.92 0.81 -0.97 -1.01 -1.32 -1.1 -1.33 -0.66 -1.1 -2.04 -0.68 0.7 1.05 -0.54 -0.81
0.4 -0.16 -0.76 -1.21 -1.39 -1.2 -0.48 -0.3 0.15 0.69 1.11 1.25 0.63 0.1 -1.26 0.42 0.34 -0.98 -0.85 -0.61 -0.95 -0.77 0.61 1.05 -0.88 -0.8
0.06 -0.29 -0.86 -1.29 -1.6 -1.62 -0.57 -0.41 -0.05 0.62 0.91 1.11 0.4 0.24 -1.22 0.71 0.62 -0.51 -0.76 -0.48 -0.71 -0.6 0.83 1.08 -0.74 -0.58
0.02 -0.15 -0.43 -0.81 -0.57 -0.35 -0.38 0.04 0.47 0.64 0.49 0.33 -0.02 -0.49 -0.4 0.22 -0.44 0.35 -0.11 -0.32 -1.75 -0.03 1.2 0.13 -0.16 -0.07
0.23 -0.01 -0.63 -1.17 -0.89 -0.4 0.22 0.36 0.46 0.72 0.79 0.88 0.46 -0.34 -0.36 0.48 0.22 0.16 -0.27 -0.24 -1.35 -1.76 -0.03 0.24 -0.18 -1.44
0.66 -0.85 -1.29 -0.15 0.17 -0.6 -0.18 -0.1 -0.06 0.61 1.38 1.19 1.18 -0.88 -2.21 -1.65 -2.25 -1.75 -5.04 -4.06 -0.81 -1.55 1.28 0.92 0.66 -0.32
0.95 -1.18 -0.77 0.04 0.5 -0.96 -0.12 0.05 0.17 0.69 1.43 1.5 1.03 -2.15 -2.29 - - -1.53 -3.69 - -1.96 -2.93 0.23 1.21 1.23 -0.4
0.67 0.18 0.1 0.48 0.26 0.1 0.02 0.19 0.35 0.48 0.91 1.39 1.21 -2.06 -3.24 -1.66 -2.56 -1.34 -2.37 -1.77 -1.15 -0.57 0.48 0.73 -0.98 -0.97
0.51 0.34 -0.09 0.19 0.53 0.47 0.18 0.41 0.55 0.61 0.75 0.6 0.12 -0.89 -0.63 -0.83 -0.62 -0.19 -0.33 -0.37 -1.91 -1.66 -0.03 -0.27 -0.49 -0.49
0.14 -0.49 -0.58 -0.57 -0.37 -0.32 -0.38 0.08 0.41 0.91 0.84 0.84 0.16 -0.59 -0.68 -0.24 -0.16 0.06 -0.07 -0.74 -1.47 -2.8 0.85 0.39 0.29 0.12
-0.22 -1.55 -2.06 -2.31 -2.13 -1.31 -0.5 -0.28 0.23 0.91 1.4 1.87 0.04 0.36 -1.27 0.35 -0.74 -0.82 -1.27 -0.96 -1.24 -1.57 1.08 1.3 -0.41 -0.59
-0.36 -1.69 -2.61 -2.79 -2.64 -2.12 -0.72 -0.59 -0.02 0.73 1.1 1.63 -0.37 0.46 -1.8 0.48 -0.66 -0.43 -1.3 -0.94 -0.98 -2.31 1.52 1.87 -0.08 -0.46
0.33 -0.65 -0.95 -0.39 -0.59 -0.57 0.41 0.49 0.43 1.07 1.28 1.08 0.67 -1.79 -2.92 -2.14 -2.41 -1.94 -2.12 -2.25 -0.64 0.52 1.03 0.59 0.17 -0.2
0.48 -0.33 -0.18 0.17 0.37 0.21 -0.28 -0.23 -0.18 0.45 1.09 1.54 0.79 -0.91 -1.27 -2.01 -2.84 -2.86 -2.15 -2.86 -1.45 -1.52 1.41 0.89 -0.42 -0.25
0.2 -0.06 0.03 0.12 0.2 -0.01 -0.04 0.02 -0.06 0.23 0.31 0.5 0.41 -0.43 -0.45 -0.28 -0.29 -0.43 -0.37 -0.33 -0.75 -0.15 0.54 0.44 -0.15 -0.14
-0.28 -0.26 -0.99 -0.2 -0.12 -1.13 -0.91 -0.78 0.72 1.03 1.28 1.24 -0.87 -1.7 -1.85 -2.72 -0.98 0.45 -0.67 -1.09 -2.3 0.24 1.69 0.34 -0.46 0.21
0.42 0.75 -0.02 -0.82 -2.84 -4.01 -2.1 -0.73 -0.64 0.32 1.21 1.65 1.33 -1.7 -2.78 -4.77 -3.2 -1.84 -2.03 -1.9 -2.23 -1.13 1.89 1.3 0.16 0.23
0.2 -0.02 -0.01 0.11 -0.19 -0.21 -0.04 0.29 0.69 0.68 1.03 1.2 0.21 -0.49 0.01 -0.15 -0.49 -0.2 -0.16 -0.73 -3.3 -1.67 0.39 -0.3 -1.28 -1.06
0.19 -0.19 -0.1 0.07 0.29 0.39 -0.05 -0.13 0.13 0.26 0.62 0.74 0.32 -0.3 -0.55 -0.27 -0.44 -0.89 -0.2 -0.32 -1.14 -0.14 0.54 0.11 -0.2 -0.33
0.26 0.37 -0.0 -0.8 -0.64 -0.82 0.06 0.29 0.59 0.74 0.9 1.25 0.47 -0.77 -1.41 -1.34 -1.49 0.32 -0.57 -0.45 -3.27 -1.94 1.13 -0.22 -0.5 0.23
-0.42 -0.96 -0.26 0.42 0.41 -0.7 0.36 -0.07 0.02 0.96 1.28 1.89 -0.12 -1.2 -1.9 -0.36 -1.79 -1.69 -1.87 -2.37 -0.92 -5.15 0.96 0.51 0.25 -0.49
0.78 -0.16 -0.73 0.32 0.26 -0.22 -0.3 -0.07 0.33 0.63 1.42 1.59 1.23 -0.49 -2.65 -1.54 -1.67 -1.98 -2.93 -2.32 -1.75 -1.59 -0.12 0.92 -0.36 -0.89
0.41 0.01 0.26 0.12 -0.05 0.37 0.26 0.51 0.74 0.76 0.85 0.68 0.55 -1.59 -1.03 -2.51 -0.89 -0.73 -0.68 -0.09 -2.27 -0.54 0.34 -0.42 -0.33 -0.19
0.52 0.64 0.31 0.37 0.12 -0.16 0.16 0.38 0.99 0.76 1.12 1.05 0.45 -2.08 -1.18 -1.81 -1.4 -0.67 -1.03 -1.41 -3.43 -1.9 0.67 0.02 -0.81 -1.25
0.16 -0.17 -0.36 -0.55 -0.51 -0.53 -0.24 -0.23 0.12 0.54 0.7 0.82 0.25 -0.01 -0.8 0.7 0.43 -0.33 -0.3 0.03 -1.77 -0.27 -0.28 0.85 -0.59 -0.43
0.75 0.68 0.38 0.54 0.21 -0.24 0.07 0.29 0.75 0.63 1.05 0.92 0.43 -2.52 -1.6 -2.85 -1.13 -0.32 -0.54 -0.39 -3.33 -1.91 0.3 0.0 -0.49 -1.04
0.15 -0.61 -0.55 -0.04 0.31 0.52 0.41 0.25 0.61 0.6 0.7 0.77 0.44 -1.75 -1.83 -0.62 -1.55 -1.09 -2.09 -1.92 -0.2 -0.37 0.7 0.72 0.25 0.01

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.