Heatmap: Cluster_73 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-0.65 -1.27 -0.42 -0.08 0.47 0.41 1.24 0.91 0.62 -0.15 -0.3 -1.39 -2.1 -0.96 -0.62 0.04 -0.07 0.45 -0.1 0.02 -1.05 -1.61 0.48 -0.31 0.72 0.39
0.47 -1.04 -2.24 0.2 0.59 0.61 1.53 0.87 -0.41 -1.57 -2.5 -2.38 -2.57 -0.33 -0.33 - -0.38 0.9 0.64 -1.24 -2.91 -0.43 0.49 -1.86 1.53 0.8
-1.66 -3.35 -2.42 -0.9 0.21 0.93 0.81 -0.03 0.47 -0.6 -0.63 -1.2 -1.39 0.03 -0.04 -0.48 -2.03 -0.78 -1.32 -2.64 -1.28 0.92 1.12 0.69 1.96 0.56
-1.47 -1.42 -0.98 -0.02 -0.09 -0.18 0.81 0.55 0.43 -0.28 -0.69 -1.15 -2.08 -0.49 -0.44 -0.06 0.07 0.11 0.13 -0.51 -1.02 0.91 0.52 0.17 1.4 0.43
-0.75 -0.88 -0.43 -0.0 0.33 0.42 1.04 0.63 0.64 -0.39 -0.74 -0.65 -0.39 -0.84 -0.57 -0.33 -0.45 0.41 -0.17 -0.19 -1.84 -0.09 0.69 0.18 0.87 -0.05
-2.33 -1.68 -0.63 0.16 0.02 0.21 1.26 0.99 0.77 -0.51 -0.93 -1.89 -3.13 -0.44 -0.7 0.07 -0.48 -0.14 0.06 -0.55 -2.68 1.22 0.3 -1.1 1.38 0.43
-1.47 -1.46 -0.62 0.14 0.5 0.81 1.27 1.09 1.18 0.32 -0.23 -0.7 -1.91 -0.59 -1.29 -0.02 -0.91 0.04 -0.25 -0.39 -1.19 0.37 -0.24 -0.57 0.29 -0.23
-3.01 -2.36 -0.78 -0.41 -0.61 -0.04 1.07 0.73 0.54 -0.11 -1.64 -2.62 -2.85 -1.05 -0.53 -0.14 -0.16 0.77 0.26 -0.13 -1.05 0.68 -0.02 0.45 1.83 0.24
-2.44 -1.41 -0.68 -0.28 0.14 0.75 1.22 0.73 1.04 0.06 -0.23 -0.64 -3.07 -0.72 -0.31 -0.33 -0.3 0.13 -0.13 -0.51 -2.14 -0.18 0.76 0.49 0.67 -0.04
-2.32 -1.36 -0.96 0.21 0.3 0.88 0.9 0.58 0.7 -0.55 -0.53 -0.78 -3.29 -0.62 -1.24 -0.84 -0.51 -0.73 -0.32 -0.74 -0.96 0.94 0.32 0.04 1.77 0.21
-0.41 -0.29 -0.18 0.56 0.48 0.25 0.45 0.13 0.21 0.52 0.53 0.66 -0.38 -1.09 -0.48 -1.5 -0.52 0.04 -0.61 -0.35 -4.32 -1.12 0.49 0.89 0.16 0.1
-0.62 -0.65 -0.48 0.02 -0.38 -0.01 0.6 0.49 0.62 0.27 0.04 -0.35 -0.77 0.12 -0.16 0.42 -0.42 0.49 -0.17 -0.58 -0.93 0.2 -0.28 -0.64 0.92 0.15
-1.16 -0.66 -0.5 0.6 0.66 0.82 0.33 0.45 -0.1 0.08 -0.29 -0.85 -1.77 -1.07 -0.45 -1.17 -0.74 -0.11 0.81 -0.86 0.03 -0.34 -0.6 -0.65 1.64 0.47
-1.23 -1.83 -0.81 0.42 0.48 0.64 0.97 1.09 0.67 -0.02 -0.6 -1.56 -1.51 -1.81 -0.79 -0.77 -0.36 -0.05 0.19 -0.21 -0.93 0.34 1.04 -1.65 0.89 0.27
0.06 -0.74 -0.53 -0.45 0.41 0.32 0.71 0.46 0.38 0.06 0.01 0.0 -1.1 -0.23 -0.77 -0.67 -0.45 0.25 0.12 0.1 -3.36 -0.82 1.07 0.83 -0.41 0.13
-0.72 -1.04 -1.19 0.25 0.14 0.23 1.19 0.85 0.94 -0.15 -0.61 -0.23 -0.86 -0.91 -1.06 -0.21 -0.75 0.1 -0.47 -0.62 -2.43 -1.4 1.0 -0.48 1.27 0.54
-4.25 -1.6 -1.27 -0.16 0.57 0.6 1.05 0.79 0.93 0.21 -0.15 -0.35 -3.59 -0.84 -0.5 -0.56 -0.04 0.24 0.17 0.36 -2.5 0.4 0.61 0.35 0.18 -0.5
-1.27 -0.71 -0.3 0.04 0.4 0.81 0.84 0.74 0.47 -0.36 -0.41 -0.73 -1.42 -0.29 -0.16 -0.05 -0.09 -0.18 0.09 -0.35 -2.01 0.91 -0.44 -0.22 0.74 -0.05
0.08 -0.32 -0.5 0.31 0.29 0.5 0.23 0.55 0.11 -0.57 -0.01 -0.23 -0.49 -0.93 -0.62 -1.4 -0.58 0.27 0.08 -0.38 -3.4 -0.25 0.77 0.62 0.87 0.44
-0.94 -0.47 -0.53 0.75 0.07 0.52 0.12 0.57 -0.06 -0.24 -0.05 -0.45 -1.6 -1.29 -1.03 0.14 -0.31 0.6 -0.16 -1.55 -0.32 -1.86 0.81 0.67 1.04 0.54
-2.02 -1.34 -0.84 -0.37 -0.29 0.1 0.9 0.49 0.39 -0.57 -0.66 -1.11 -2.51 -0.8 -0.58 -0.18 -0.22 0.37 0.18 -0.14 -1.79 1.15 0.63 0.57 1.35 0.27
0.04 0.21 -0.13 -0.03 -0.08 0.21 0.55 0.65 0.4 0.01 0.19 0.17 -0.25 -0.72 -1.09 -0.83 -0.65 -0.18 -0.1 -0.63 -3.05 0.15 0.84 0.3 0.49 -0.06
-2.94 -2.84 -0.81 0.19 0.85 0.56 1.74 1.41 1.36 0.23 -0.51 -2.31 -3.99 -1.49 -1.41 -0.07 -0.4 0.01 -0.23 -0.46 -2.25 0.73 -0.19 -2.75 0.62 -0.78
- - - 2.73 -0.16 - 0.86 0.54 0.64 -0.43 -0.38 - - - - - - - - - - 0.94 1.27 -0.45 2.82 -
-0.9 -2.16 -2.69 0.93 0.13 -0.33 1.05 0.89 1.12 0.94 0.46 -2.02 -1.42 - -2.2 -1.29 - -0.39 -1.24 -3.81 0.14 0.32 0.06 0.48 1.67 0.52
-0.98 -0.99 -0.49 -0.08 0.04 0.43 0.54 0.64 0.63 -0.05 0.07 -0.39 -0.92 0.24 -0.22 0.25 0.1 0.21 0.2 -0.64 -1.76 0.05 0.05 -0.45 0.85 -0.11
0.06 0.21 -0.56 -0.24 -0.58 -0.45 0.31 0.51 0.49 0.32 0.31 0.03 0.0 -0.53 -0.53 -0.52 -0.72 0.08 -0.04 -0.4 -0.86 0.29 0.77 -0.04 0.52 -0.07
-2.19 -1.54 -0.18 -0.62 0.4 1.01 1.5 0.94 1.01 -0.63 -1.86 -1.98 -2.74 -0.93 -0.82 0.6 0.18 -0.31 0.42 0.08 -1.34 -1.43 -0.95 -0.08 1.22 -0.01
-3.5 -2.76 -0.73 -0.2 -0.14 0.08 1.24 0.97 0.95 0.13 -0.41 -0.77 -3.09 -0.45 -0.71 0.28 0.01 0.29 -0.14 -0.1 -2.13 1.03 -0.51 -0.53 1.12 0.1
-1.75 -2.87 -1.49 -0.11 0.08 0.66 1.41 0.98 1.02 0.26 -0.78 -0.96 -2.89 -1.58 -1.16 -0.76 -0.62 0.17 -0.09 -0.33 -2.0 -1.04 1.26 0.85 0.72 0.12
-1.89 -0.7 -0.39 0.43 0.39 0.08 1.26 0.89 0.69 -0.16 -0.28 -0.72 -3.97 -0.87 -0.51 -0.36 -0.6 1.06 -0.16 -0.62 -1.69 -0.91 0.91 -0.34 0.74 -0.22
-2.85 -2.81 -0.76 0.04 0.07 0.54 1.03 0.73 0.97 0.21 0.05 -0.1 -3.46 -1.18 -0.14 -0.34 -0.37 0.43 0.13 -0.29 -2.71 0.04 1.23 -0.23 0.45 -0.29
-1.9 -5.5 -2.02 0.44 0.35 0.64 1.43 1.38 1.52 0.71 -0.29 -2.18 - -5.67 -2.67 -2.3 -0.92 0.23 0.02 -1.2 -4.52 0.01 -4.59 -2.3 2.21 -0.05
-0.79 -0.34 -0.33 -0.01 0.36 0.22 0.32 0.72 0.06 0.18 0.45 -0.34 -0.94 -0.35 -0.46 -0.05 -0.77 0.2 -0.29 -0.78 -0.42 -0.34 0.83 -0.39 0.82 0.24
-1.87 -1.13 -0.7 -0.27 0.09 0.46 1.19 0.91 0.77 -0.16 -1.33 -1.7 -2.6 -0.62 -0.16 0.14 -0.29 0.31 0.37 0.26 0.38 0.61 1.04 -1.72 -0.54 -0.54
-1.48 -1.17 -1.01 0.2 -0.12 0.94 1.18 1.31 1.11 0.27 -0.95 -1.23 -1.95 -1.11 -0.45 -0.59 -1.19 0.62 0.18 -0.32 0.04 0.57 0.76 -2.27 -0.68 -0.73
-0.15 -0.72 -1.21 -0.68 -0.44 0.29 0.52 0.89 1.21 0.81 0.2 -0.47 -0.57 -1.5 -0.68 -1.47 -0.65 0.08 -0.61 -0.52 -2.15 -1.2 1.45 0.49 0.2 0.32
-0.82 -1.03 -1.09 -0.18 0.14 -0.04 1.05 0.72 0.54 -0.36 -0.37 -0.43 -0.65 -0.6 -0.51 -0.43 -0.7 -0.05 -0.36 -0.94 -1.23 1.13 0.28 -0.13 1.15 0.57
-0.39 -1.05 -0.17 0.48 0.39 0.8 1.13 1.02 0.44 0.04 -0.52 -0.53 -0.33 -2.25 -2.0 -1.18 -1.06 -0.12 0.05 0.1 -1.15 0.04 -0.02 -0.91 0.75 0.63
-0.78 -0.7 -0.61 -0.96 0.04 0.05 0.3 0.41 0.39 0.4 0.04 -0.35 -0.62 0.66 -0.17 0.45 -0.38 0.09 -0.1 -0.56 -1.24 -0.13 0.54 0.13 0.7 0.17
-0.89 -1.4 -0.86 -0.12 0.05 0.14 0.92 0.85 0.69 -0.17 -0.72 -1.3 -1.16 -0.86 -0.53 -0.16 -0.16 -0.03 -0.01 -0.28 -1.76 0.55 0.11 0.23 1.49 0.21
-1.92 -2.39 -0.93 0.21 0.38 0.59 1.43 1.21 1.12 0.39 -0.54 -0.45 -2.09 -1.55 -1.41 -1.26 -0.34 -0.52 -0.51 -0.69 -2.13 -3.26 1.49 -0.25 0.79 0.32
-1.72 -0.73 -1.06 -0.49 0.51 1.34 1.25 1.33 -0.3 -0.63 -1.64 -2.33 -1.49 -0.34 -1.79 -1.32 -0.31 0.66 0.44 0.38 -2.71 0.81 0.48 -0.53 0.1 0.18
-0.92 -1.75 -0.71 0.32 1.03 0.65 1.6 0.81 0.18 -1.06 -0.64 -4.32 - -1.56 -0.88 -2.95 -1.23 1.03 0.09 -0.75 -0.99 -1.12 0.3 0.51 1.17 0.68
-1.1 -2.82 -1.29 0.19 0.22 0.33 1.04 1.1 1.19 0.65 0.12 -0.69 -1.14 -0.7 -1.0 -0.29 -0.2 0.08 -0.24 -0.22 -3.21 0.8 -0.92 0.15 0.2 0.03
-1.84 -1.8 -2.53 -0.96 0.09 0.19 0.55 0.35 -0.33 -0.46 -0.55 -0.9 -2.04 -2.07 -1.84 -1.78 -0.75 -0.01 0.08 -0.78 -2.98 0.36 1.79 1.39 1.79 0.89
-1.3 -0.43 -0.14 0.44 0.58 0.29 0.16 0.23 0.63 0.27 0.57 0.4 -3.12 -1.61 -0.89 -1.72 -0.77 0.14 -0.17 -0.0 -4.35 -1.37 1.05 1.29 0.19 0.12
- - - 1.83 2.44 - -0.24 -0.22 1.33 - - -0.15 - - - - 0.73 - - - - - - 1.36 2.58 0.76
-0.16 -0.94 -1.34 -0.88 -0.26 -0.06 0.4 0.4 0.82 0.33 0.06 -0.04 -0.16 0.25 -0.29 0.14 -0.11 0.28 -0.18 -0.59 -1.18 -0.08 0.02 0.33 0.75 0.19
-1.01 -1.23 -0.55 0.16 0.4 0.83 1.01 0.85 0.97 -0.1 -0.93 -1.55 -2.66 -1.89 -1.02 -0.73 -0.68 -0.11 0.08 -0.55 -1.0 -0.45 0.64 -0.02 1.53 0.17
-4.14 -3.25 -0.94 0.23 0.51 0.47 1.41 1.13 1.35 0.17 -1.27 -2.15 -2.97 -3.83 -1.07 -0.28 -0.38 0.23 -0.06 -0.27 -3.15 0.06 -0.65 -1.5 2.05 -0.61
-0.75 -0.4 -0.24 0.14 0.3 0.21 0.59 0.47 0.25 0.02 -0.11 -0.23 -1.68 -0.09 -0.34 0.18 -0.32 -0.12 0.08 -0.21 -2.01 0.67 -1.26 0.11 1.0 0.35
-1.41 -0.98 -0.38 0.06 0.29 0.84 1.17 0.81 0.76 -0.05 0.0 0.1 -1.1 -0.94 -0.37 -0.18 -0.33 -0.2 0.14 -0.23 -3.14 -1.65 -0.09 0.2 0.56 0.39
-3.32 -3.34 -1.45 0.31 0.34 0.59 1.54 1.13 1.44 0.35 -1.17 -2.72 - -2.11 -1.46 -0.55 -0.24 0.17 0.68 0.66 -3.17 -1.04 -1.19 -2.19 1.62 0.0
-0.83 -0.49 -0.24 0.38 0.81 0.64 0.51 0.21 0.61 0.13 0.17 -0.19 -1.47 -0.36 -0.7 -0.34 -0.5 -0.2 -0.13 -0.4 -1.94 -0.73 0.7 0.71 0.08 0.13
-2.06 -2.01 -0.88 0.19 0.62 0.68 1.41 1.25 1.0 0.43 -0.15 -0.67 -3.11 -1.14 -1.28 -0.89 -0.97 -0.38 -0.12 -0.6 -3.31 0.97 0.17 -0.65 0.55 0.16
-1.72 -2.24 -2.1 -0.34 0.59 0.5 0.87 0.92 0.09 -0.61 0.14 -1.16 - -2.55 -0.99 -1.01 -0.05 0.21 0.47 -1.3 -1.14 0.03 1.39 0.91 1.29 0.09
-1.36 -0.88 -0.53 0.27 0.72 0.83 0.94 0.83 0.37 -0.15 -0.59 -1.32 -1.97 -0.83 -0.48 -0.31 -0.42 -0.44 -0.01 -0.45 -2.58 1.24 -0.03 -0.31 0.84 0.18
-0.97 -1.8 -0.78 -0.34 -0.26 -0.4 0.82 0.7 0.42 -0.09 -0.53 -1.02 -1.78 -1.12 -0.71 -0.1 -0.39 -0.21 -0.66 -0.38 -0.82 0.94 0.58 0.7 1.63 0.45
- -3.98 -1.35 -0.16 -0.26 -0.09 1.41 1.44 1.07 0.53 -1.18 -1.52 -4.72 -2.28 -1.35 -0.61 -0.15 0.94 -0.18 -0.01 -3.61 -0.73 -0.15 -0.87 1.81 0.62
-0.11 -0.19 -1.35 -0.06 0.1 -0.13 0.29 0.39 0.1 0.11 0.37 -0.01 -0.12 -1.12 -0.81 -0.68 -0.69 0.04 -0.49 -0.57 -0.37 1.04 0.95 0.29 0.52 -0.22

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.