Heatmap: Cluster_228 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
-4.76 0.02 - -6.92 -6.98 -4.74 -6.45 -4.41 -2.59 -4.81 -3.25 - - -0.24 -1.72 -0.12 -4.57 -1.77 -2.59 -0.24 -3.09 0.26 0.68 1.23 0.48 0.51 -4.01 1.28 3.26 0.14 0.99 1.33 1.56 0.98 -2.14 -2.18 -1.7 0.37 1.14 -1.53 - 1.91 1.27 -4.26 0.35 - - -1.49
-7.06 -6.46 -1.16 1.7 -3.06 - -0.33 - - - - - - -3.24 - -2.36 - - -2.58 - - - - 2.19 - 1.84 - 0.74 5.0 - -5.41 -4.96 -3.46 - - -0.38 - -2.12 -6.35 - - - - - - - - -
1.75 3.96 - -2.71 -4.2 - -2.12 - - - - - - -1.45 1.03 -4.98 - - -5.35 2.6 - - - 2.01 - 1.34 - -0.3 2.36 - 2.92 - - - - - - -7.12 - - - - - - - - - -
- -2.76 4.56 2.57 3.45 - -0.55 - - - - - - - - - - - 2.65 - - - - -6.15 - - - - -1.98 - - - - - - - - -2.17 - - - - - - - - - -
- -5.4 - - - - - - - - - - - 0.26 - - - - - - - - - 3.85 - 1.95 - -1.39 4.55 - 2.26 - - - - - - - - - - - - - - - - -
-2.01 -4.21 - 2.62 - - 3.99 - 0.86 - - - - -2.57 - - - - - - - - - 2.48 - 1.46 - - 3.7 -2.59 1.14 - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - -2.69 - - 2.61 - 1.99 - 0.14 5.18 -2.72 -2.18 - - - -6.49 - - - - - - - - - - - - -
- 3.35 - - - - - - - - - - - - - - - - - 1.95 - - - 1.63 - - - - 3.47 - 4.31 - - - - - - - - - - - - - - - - -
- - -2.79 -2.63 -0.22 - - -3.11 - -4.11 - - - - - - - - -1.13 - - - - 1.8 - 0.33 - -2.48 5.35 - -2.41 - - - - - - - - - - - - - -2.5 - - -
-6.15 -4.51 - - - - - - - - - - - -7.24 - -5.22 - - - -4.87 - - - 3.61 -6.79 2.51 - 1.24 4.78 -7.33 -4.38 -6.95 - - -7.43 - - - - - - - - - -5.44 - - -
-0.4 1.75 - - - - - - - -1.98 - -2.67 0.19 - - - - - - 0.93 - - - 3.73 - 3.23 - - 4.0 - 0.15 - - - - - - - - - - - - - -0.55 - - -
- 0.59 - - - - - - - - - - - 0.22 - - 2.2 - 1.33 0.1 1.92 - 1.25 2.53 - 1.06 - - 0.0 - 2.4 0.21 -0.99 -0.0 -1.33 3.08 - 2.03 - - - - - - 0.37 - - -
- -3.23 - - - - - - - - - -1.98 - - - - - - - -3.64 - - - 3.29 - 2.36 - 0.58 4.96 - - -3.32 - - - - - - - - - - - - - - - -
AT1G59670 (GSTU15)
1.42 -2.55 0.24 -1.78 0.56 -1.01 -2.01 -3.67 - -6.47 -5.52 - -0.54 -2.87 -4.4 -3.87 -6.67 -3.1 -3.29 -4.49 -4.12 - - 3.0 -3.97 2.1 -1.62 -0.57 4.45 - -2.88 -6.81 -7.29 -7.71 -8.71 - 1.72 0.2 -2.65 - - - -5.4 - - - - -
- -3.29 0.74 1.75 0.03 -2.64 0.8 - - -6.78 -4.1 - -2.75 -4.49 - -5.07 - - -3.21 -5.47 - - - 3.04 - 2.04 - -0.18 4.7 - -1.71 - -6.89 - -7.48 - - -6.31 - - - - - - - - - -
-0.36 -4.04 1.79 1.29 0.06 -1.03 0.89 - - - - - - -2.26 - - - - -1.17 -2.9 -1.9 - - 2.94 -1.81 2.12 - 0.89 4.02 -3.32 -3.93 - -1.23 - - - 0.06 -3.71 -4.38 2.23 - - - - - - - -
- -7.37 0.71 0.72 -1.17 -2.41 -0.88 - - - - - - -4.84 - - - - -0.68 -6.17 - - - 2.79 - 2.31 - 0.87 4.82 - -3.23 -2.32 -6.52 -5.27 -7.81 - - -7.31 -7.89 - - -0.79 - - - - - -
- - - -0.14 - - 1.37 - - - - -2.29 - - - - - - -1.07 - - - - 2.85 - 1.69 - - 5.01 - -1.56 - - - - - -0.3 - - - - - - - - - - -
- -3.2 - - - - -1.02 -1.72 -3.43 - -2.13 - - -4.09 - - - - - -4.59 - - - 2.88 - 1.81 - -0.13 5.11 - -1.99 - - - -2.96 - - -7.95 -6.84 - - - - - - - - -
AT1G78220 (GRF13)
-3.99 -0.35 - - -1.87 - -2.9 - - - - - - -0.7 0.67 -2.96 -2.13 - - -0.64 - -2.42 -2.01 3.63 -3.4 2.32 - -1.87 4.49 - 0.72 -4.99 - - -0.06 -2.99 - -3.13 - - - - - - - - - -
AT2G02147 (LCR73)
- -8.7 -3.28 -0.85 - - -3.47 - - - -6.79 -10.45 - -1.6 - -6.76 - - -3.13 -8.48 -5.98 -6.7 -6.77 3.45 -6.16 1.63 - -1.31 4.9 -7.49 1.15 - -8.59 -5.58 -5.15 -3.28 -6.92 -6.65 -7.28 - - - - - - - - -
- - - - - - 3.29 - - 0.91 - - 1.55 - - - - - - - - - - 0.06 - 1.17 - - 4.91 - - - - - - - - - - - - - - - - - - -
-1.19 -4.68 -2.77 -1.94 - - -5.08 - - - -3.28 - - -3.45 - - - - -2.86 -6.64 -4.48 - - 2.67 - 2.12 - 0.82 5.08 -5.07 -1.9 -8.12 - -7.98 -8.13 -5.94 - - - - - - - - -4.26 - -11.37 -5.98
-3.41 -4.22 - -0.72 0.41 - - - - - - - - -2.18 - - - - -0.89 -3.39 - - - 3.44 - 3.27 - 1.73 4.3 - 0.3 - - - - - - - -2.43 - - - - - - - - -
- - - - - - - - - - - - 0.59 - - - - - - - - - - 2.97 - 1.26 - - 5.17 - -2.23 - - - - - - - - - - - - - - - - -
- -2.51 - - - - - - - -2.82 - - - 1.12 - -4.32 - - -2.88 -4.24 - - - 2.06 - 1.57 - 1.34 4.55 - 1.56 -3.5 -3.39 -1.97 - - - -0.12 - - - 1.6 -3.24 1.18 1.17 - - -2.38
AT2G17310 (SON1)
- -6.6 -2.57 - -2.83 - -2.73 - - - - - - - - - - - -1.95 -6.07 - - - 2.87 - 2.79 - 0.33 4.94 -5.12 -2.99 -5.37 - - - - -1.22 -6.81 - - - -1.37 -3.31 - - - - -
- -4.33 -2.67 -2.19 - - -2.54 - - - - -6.02 - -1.59 -3.13 - -4.28 - -3.16 -4.5 - - - 2.06 - 0.77 - -1.76 5.05 - -0.48 2.46 -2.56 -1.12 -1.17 - - -5.47 - - - - -4.14 - - - - -4.27
AT2G32370 (HDG3)
1.7 -5.35 -4.16 -4.73 -4.74 -4.84 -4.14 - -6.06 -7.9 - -2.56 1.63 -1.54 - -6.51 - - -5.87 -6.66 -5.2 - -8.32 2.78 -2.47 1.78 - -0.04 4.82 -10.1 -0.08 -9.5 -7.57 -6.45 -7.24 -8.31 -4.4 -7.41 -11.91 - - - - - -6.21 - - -
-0.03 2.0 -6.22 - - - - -4.55 - - - -4.62 -6.87 -4.96 -0.93 -7.19 - - -5.17 1.14 - -5.6 - 2.26 - 1.44 - 0.59 4.85 - 1.06 -8.36 -7.03 -5.91 -8.3 -6.17 - -7.24 -8.66 - - - - -4.5 -6.08 - -6.59 -
- -3.87 3.42 -0.01 2.6 - 1.23 - - -1.04 -1.04 -0.71 -3.29 -2.97 - -3.5 - - 2.34 -3.81 -2.71 - - 2.48 - 1.5 - 0.7 3.25 - -0.48 - - - - - - -3.16 -6.23 - - - - - -2.49 - - -3.59
- -4.45 2.99 3.19 2.44 - 1.98 - - -3.72 - - - -3.89 - - - - 1.36 -3.98 - - - 1.76 - 0.25 - -1.08 3.77 - -4.61 - - - - - - - - - - - - - - - - -
- - - - - - 0.78 - - - - - - - - - - - - - - - - 1.47 - -0.13 - - 4.84 - 1.88 - - - - - - - - - - - - - - 3.35 - -
- -2.02 -2.43 - - - - - - - - - - -4.68 - -4.25 - - - -5.35 -3.59 - - 3.25 - 2.53 - 1.14 4.75 - 1.31 -4.88 - - - - -3.4 -7.77 - - - -2.23 - - -3.14 - - -
AT3G26270 (CYP71B25)
- -3.84 -1.02 - -3.29 - - - - - - - - -2.42 -1.75 -3.85 - -0.38 -4.77 -6.3 - - -2.84 2.77 - 1.36 -2.95 -1.12 4.99 - -2.27 - - - -3.78 - 1.81 -5.56 -3.01 - - - - - -2.74 - - -
AT3G27840 (RPL12-B)
- -1.36 - - - - - - - - - -0.5 - - - - - - -2.18 -3.76 - - - 0.24 - -0.03 - - 5.47 -1.99 - - - - - - - - - - - - - - - - - -
- - - -1.47 - - - - - - - - - -2.91 - -2.48 - - -0.51 - - - - 1.28 - 1.37 - -0.34 5.2 - -1.84 -3.1 - -2.45 -4.63 - - -3.68 - - - 1.54 - - -1.37 - - -
AT3G48280 (CYP71A25)
-10.14 -2.1 - -6.77 - - -6.44 - - - - -3.16 -8.13 -3.14 -0.46 0.07 1.6 1.93 -2.5 -3.12 -1.41 -4.2 -4.18 0.97 -8.19 1.46 -6.92 -2.27 4.96 -9.63 -1.27 -3.58 -1.79 -2.7 -4.27 -3.07 -2.81 -1.74 -2.42 -4.09 - -5.27 -3.83 -4.49 -3.81 - - -3.24
3.65 1.41 -1.66 -0.73 -2.64 -6.17 -0.82 -6.3 - - -5.83 -5.38 -6.64 -0.24 -0.47 -5.8 -5.86 - -1.62 0.27 -4.4 -6.22 - 2.3 -6.05 0.49 -5.66 -1.76 4.09 - 2.03 -7.79 - - -8.24 -4.78 - -8.63 - - - - - - -5.7 - - -
- - - - - - -1.34 - - - - - - - - - - - - - -2.56 - - 1.51 - 1.26 - - 5.39 - - - - -3.42 - - - -4.55 - - - - - - - - - -
1.2 -1.93 - 1.47 0.31 - 0.77 - -0.42 -1.72 - - - - - - 1.38 - - - - - - 3.28 - 2.35 - 0.03 3.7 - -1.53 - - -2.14 -4.02 - - -1.99 - 1.95 - - - - - 1.34 - -
- -0.49 - - - - - - - - - - - -1.16 1.61 - - - 0.81 1.09 - - 0.61 3.27 - 2.4 - -0.34 4.4 - -2.91 - -0.79 -2.7 - - - -2.5 -1.1 - - - - - - - - -
-0.23 - -2.22 -2.04 - - -2.99 - - - - - - - - -4.04 - - -4.97 - - - - 3.28 - 2.06 - -0.59 4.99 - -2.66 - - - - - - -6.52 - - - - - - - - - -
- -4.19 -0.56 -0.39 - - - - - - - -1.04 -0.21 - - - - - - - - - - 2.07 - 1.63 - 1.34 5.01 - - - - - - 0.64 0.62 -4.7 - - - - - - - - - -
- - - - - - 0.41 - - - - 2.04 - - - - - - - - - - - 2.53 - 1.87 - 0.9 4.97 - - - - - - - - - - - - - - - - - - -
- -5.39 -2.21 2.68 0.22 -0.81 2.92 - 0.8 - 0.24 - - -1.26 - - - - -3.63 - - - - 2.89 - 1.7 - 0.2 3.95 -3.81 -0.18 -1.46 - -4.24 - - - - - - - - - - - - - -
- - - 2.68 - -0.01 - - 0.14 - -0.3 - - - - - - - -1.67 - - - - 1.56 - 0.58 - - 5.07 - -2.19 - - - - - - -4.16 - - - - - - - - - -
1.38 -4.38 2.2 3.23 1.55 -1.61 2.79 -5.67 -5.49 -3.23 -4.65 -2.27 -1.59 -5.22 - -5.14 - -6.06 2.48 -4.95 -5.98 - -6.76 0.11 - -0.68 - -1.42 3.42 -6.54 -3.24 -5.97 -2.44 0.35 -9.43 - -3.9 -8.02 -5.22 - - -2.74 -5.07 -3.75 -6.65 - - -
- - - -3.61 -5.18 - - - - - - - - -6.03 - -3.27 - - - -7.28 -4.94 - - 3.36 - 2.66 - 0.12 4.89 -6.32 -2.43 -7.0 - - -7.3 -3.57 -4.75 -3.73 - - - - - - - - - -
- -5.66 2.01 1.06 2.55 1.19 1.63 - - -3.26 - - - - - -3.72 - - -2.36 -6.57 - - - 0.51 - -0.14 - -2.61 4.79 - -6.25 - - - - - - -4.56 -7.59 - - - - - - - - -
-3.22 -6.94 - -4.23 - - - - - - - - -5.17 -5.77 - -3.75 - - -5.09 - - - -4.25 4.04 - 3.01 - 0.26 4.45 - -5.18 -4.86 - - -6.95 - -4.49 - - - - - - - - - - -
AT4G37360 (CYP81D2)
-6.78 -1.42 - - -7.17 - - - - - - - -1.11 -4.5 - -5.99 - - -8.13 -4.42 - - - 1.47 -4.86 0.28 -6.44 -0.09 5.38 - -0.91 - -8.62 -8.8 -10.28 - - -8.93 - - - - - - - - -6.2 -
- -9.11 - -7.08 -6.38 - -5.83 -6.01 - -4.36 -6.62 3.93 1.31 -4.26 - -8.3 - - -4.24 -9.43 - - - 0.93 - -0.71 -7.18 -2.61 2.34 -8.8 -1.82 -3.29 -4.97 -4.6 -10.79 - -7.22 -9.77 - - - 3.09 3.25 -5.38 1.86 - - -2.81
- -8.51 2.77 2.48 3.04 -1.39 2.46 - - -3.58 -3.75 - - - - -6.3 - - 2.53 -5.36 - - - 0.53 - 0.17 - -0.7 3.59 - -6.77 - - - -9.02 - - - -8.97 - - - -4.19 -3.02 -4.19 - - -4.07
2.95 2.88 - -1.95 -3.61 - -2.15 - - - - - - -2.04 -1.45 -4.54 -3.72 - -3.74 2.04 0.28 -1.69 -0.87 2.13 - 1.24 - 0.84 3.22 -4.32 2.37 -4.71 - -4.42 -5.81 - -3.41 -5.13 -3.75 0.92 - - - - - - - -4.62
- - - -6.7 - - -6.7 - - - - - - - - -5.49 - - - -9.61 -4.68 - - 2.66 - 1.72 -6.67 0.26 5.21 - -7.25 -8.79 - - -9.39 - - - -10.18 - - - - - -5.7 - - -
- -5.55 - -2.27 - - - - - - - - - - - - - - - - - - - 4.63 - 3.04 - -0.53 3.76 - -0.85 - - - - - - - - - - - - - - - - -
AT5G07210 (RR21)
- -8.73 -6.44 -4.1 -6.48 - -4.85 - - - - - -2.38 -2.38 -5.32 -7.4 - - -4.94 - -6.74 - - 1.18 -2.68 1.04 - 0.14 5.37 -6.21 -1.3 - - - -9.24 -6.38 - -5.1 - - - - - - - - - -
AT5G08730 (ARI16)
-5.19 -1.21 2.41 3.25 2.01 -0.97 3.0 - - -5.27 -5.85 -5.22 - -4.8 -3.73 -6.82 -5.88 - -1.12 -3.56 - - -5.73 1.54 -4.62 0.34 -4.34 -0.19 3.73 -7.58 -1.02 -5.69 -8.21 -4.58 -5.33 -4.21 -5.69 -5.29 -4.6 -2.3 - - -4.73 - - - - -5.92
AT5G10220 (ANN6)
- -4.49 - -8.42 -7.02 - -7.32 - - - - - - -5.43 - -8.43 - - -10.04 -6.04 -7.03 - - 2.09 -5.91 1.37 -8.54 -0.26 5.32 -9.21 -2.84 -8.4 -8.51 -4.61 -8.01 -7.4 -4.02 -6.42 -9.87 - - -7.41 - - -7.25 - -7.71 -
AT5G17320 (HDG9)
- -5.85 -0.62 0.28 -0.35 -0.95 0.79 -1.39 3.46 -2.3 2.54 - -5.47 -0.82 - -6.27 - - -4.24 -6.76 - - - 1.63 - 0.64 - -0.28 4.15 -8.0 0.76 - -7.48 -5.42 - - - -9.65 -9.56 - - - - - -6.17 - - -
- -3.48 - - - 0.8 - - - - - - - - - - - - - - - - - 4.48 - 4.11 - 1.4 1.91 - -2.09 - - - - - - - - - - - - - - - - -
-1.91 -3.24 -1.11 3.3 -0.58 0.24 3.12 -1.35 -0.77 -1.01 -0.57 0.26 -1.19 - - - - - -2.5 -4.51 -2.54 - - 2.18 - 1.52 - -1.3 3.81 - - - - - - - -2.58 - -5.8 - -0.99 - - - - - - -
-3.79 -0.41 -1.04 0.89 -3.51 -3.47 -0.53 - - - - - - -2.35 -2.34 - - - - -0.99 -3.75 -3.37 -1.78 1.86 -3.74 1.04 -4.27 0.64 5.06 - 0.05 -5.08 - -3.94 -3.46 - - -2.51 - -1.64 -3.98 - -3.3 - - - -4.31 -5.51
-3.79 -0.41 -1.04 0.89 -3.51 -3.47 -0.53 - - - - - - -2.35 -2.34 - - - - -0.99 -3.75 -3.37 -1.78 1.86 -3.74 1.04 -4.27 0.64 5.06 - 0.05 -5.08 - -3.94 -3.46 - - -2.51 - -1.64 -3.98 - -3.3 - - - -4.31 -5.51
AT5G38317 (LCR58)
- -0.8 - - - - - - - - - - 4.38 - - - - - - -0.99 3.72 - - 1.56 - - - - 3.2 - - - - - - - - -0.24 - - - - - - - - - -
AT5G40430 (MYB22)
- -5.28 -0.93 1.45 -0.69 - 0.53 - - - - - - - - - - - -3.81 - -2.16 -3.47 - 2.14 - 1.78 -0.73 -0.92 5.04 -3.81 -3.16 -4.23 - - - - -2.21 -4.66 -5.8 - - - - - - - - -
- -3.9 0.84 4.16 - - 3.73 - - -4.42 -1.83 -1.32 - -2.36 - - - -3.11 1.18 -5.09 - - - 1.86 - 1.33 - -0.35 2.14 - -1.44 - - - - - - - - - - - - - - - - -
AT5G43980 (PDLP1)
-1.2 -0.04 -5.98 - -5.89 -6.11 - -7.53 - - - -7.92 -6.4 1.75 -0.66 -0.6 -1.75 -3.41 -0.98 -0.49 -4.63 -2.19 -2.46 1.3 -0.73 0.76 0.39 -1.1 4.57 -1.05 -0.48 -0.36 -1.81 -1.76 -0.93 -0.22 0.32 0.03 -0.65 0.05 -2.28 -0.96 -1.61 -5.61 -1.49 - -1.82 -5.8
- 0.01 -0.28 -1.87 -0.98 - -1.97 - - - - - - -0.24 -3.12 - - - 0.24 -1.92 - - - 1.9 - 0.35 - 0.1 4.97 - 1.61 -4.32 -4.14 -0.81 - - - -1.89 - - - -1.19 -0.94 - -2.51 - - -4.19
- -5.22 - - - - - - - - -5.68 -6.95 - -8.1 - -6.42 - - -8.02 -5.23 -2.01 - -3.8 3.1 -5.17 1.32 - -2.96 5.17 -5.85 -3.12 -4.46 - - -5.44 -3.59 -2.76 -9.21 -10.16 - - - - - -4.31 - - -
-0.79 1.7 -1.21 -1.63 0.03 -4.09 -2.16 -3.91 -3.45 - - -6.89 - -3.17 -0.27 -4.68 - - -4.66 0.5 - - - 2.7 -5.07 1.97 - -0.64 4.74 - 0.73 - - -5.07 - - - -8.27 - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.