Heatmap: Cluster_278 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
1.12 -0.39 -0.63 0.05 0.51 0.51 0.74 0.95 0.81 0.95 0.4 0.4 1.21 -1.3 -1.98 -1.86 -1.13 -0.26 -1.19 -1.0 -0.39 -1.01 -2.34 -1.61 -1.39 -0.04
0.25 0.08 -0.4 -0.65 -0.04 -0.04 0.64 0.94 1.16 1.05 0.59 0.88 0.88 -0.44 -1.37 -0.72 -1.27 0.33 -1.17 -0.39 -1.79 -2.42 -1.22 -1.12 -0.43 -0.49

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.