Heatmap: Cluster_147 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
AT1G02450 (NIMIN1)
-1.64 0.27 -5.49 -5.12 -5.41 - - -5.51 - -6.67 - - -5.13 -0.53 0.98 1.65 -0.07 -1.57 0.33 1.73 0.07 2.79 2.93 0.84 -4.1 0.75 -1.7 -2.83 -1.37 -4.49 0.49 -1.7 -4.05 -6.9 -0.22 3.11 -4.19 1.24 -2.96 - -2.66 -1.36 -2.28 - -5.67 - - -3.03
AT1G14880 (PCR1)
- -7.53 - -4.17 - - -4.68 - - - - - - -4.71 - 3.53 - -6.23 -7.34 -5.45 -4.46 - - -0.15 - 1.72 -4.9 -5.66 - -7.57 -6.57 -6.61 1.34 -6.43 -6.35 -0.72 -3.87 3.41 4.16 - - -4.77 - - -2.22 - -6.42 -
AT1G19250 (FMO1)
- -9.7 - - - - - -5.39 - - - - -3.7 -7.31 - 0.37 - - -4.29 -9.53 - - - -11.36 -3.6 - -0.13 - -1.94 -7.63 - -6.52 -1.13 1.28 -8.54 - -6.02 1.69 2.25 - - 4.91 -0.91 - 1.92 - - -
0.21 -2.78 0.11 0.35 0.0 - 1.04 -1.86 -1.21 -3.69 - -0.92 - -0.62 - -3.11 - - -2.28 -3.63 - - - -4.2 - -2.71 -0.29 - 5.14 - -2.59 - -4.36 -3.95 -3.25 - -0.72 -3.28 -2.62 -0.83 -0.96 - - - - - -2.93 -2.26
0.21 -2.78 0.11 0.35 0.0 - 1.04 -1.86 -1.21 -3.69 - -0.92 - -0.62 - -3.11 - - -2.28 -3.63 - - - -4.2 - -2.71 -0.29 - 5.14 - -2.59 - -4.36 -3.95 -3.25 - -0.72 -3.28 -2.62 -0.83 -0.96 - - - - - -2.93 -2.26
0.21 -2.78 0.11 0.35 0.0 - 1.04 -1.86 -1.21 -3.69 - -0.92 - -0.62 - -3.11 - - -2.28 -3.63 - - - -4.2 - -2.71 -0.29 - 5.14 - -2.59 - -4.36 -3.95 -3.25 - -0.72 -3.28 -2.62 -0.83 -0.96 - - - - - -2.93 -2.26
AT1G30850 (RSH4)
-6.83 -7.93 - - - - - -4.95 -4.81 - -3.53 -7.4 -3.39 - -4.37 -3.19 -1.4 -0.98 -5.27 -6.93 -5.56 -5.87 - -9.36 - -7.58 - - - - - 1.13 -0.95 0.08 - - - -2.22 -3.68 - - 4.87 3.02 - 2.34 - - -2.19
AT1G33730 (CYP76C5)
3.1 -5.68 2.63 1.96 3.83 2.11 2.1 - -2.35 -3.64 - - -2.57 -5.77 -3.23 -2.91 - - -0.93 -4.94 - - - -4.26 - -3.03 -4.43 -4.18 - - - -5.99 -5.02 -4.54 -8.0 - -4.47 -1.18 2.11 -3.26 - - - - - - - -
- -3.57 - - - - - - - - - - - - 0.88 2.15 - - - - - - - 0.16 - - - - 2.4 -0.37 - 0.47 1.67 -0.84 - - - 3.74 3.99 - - - - - - - - -
AT1G57560 (MYB50)
-2.16 0.51 - - - -5.82 - -2.0 - -3.01 - -9.29 -0.77 -0.36 -0.98 -1.56 -3.3 -3.86 -4.22 -0.37 -0.35 -3.64 -2.11 -1.28 - -2.6 -5.04 - -1.98 - 0.87 0.76 -2.25 -1.12 -4.47 -0.48 -3.5 0.0 -3.13 -2.72 - 3.61 2.88 -6.67 1.17 3.63 - -1.78
-0.96 -4.6 - - 1.76 1.72 - - - - -1.21 - -0.33 0.03 - 1.82 - - - - - - 1.39 1.28 -0.9 2.4 0.82 - -1.98 - - - - - - 3.27 0.97 1.07 3.06 - - - - - - - - -
AT1G70690 (HWI1)
-2.18 -0.35 - -8.31 -5.79 -4.75 -8.24 - - -8.74 -7.33 - - -0.54 -0.75 0.01 -2.3 -1.56 -0.57 0.3 -0.91 -1.24 -0.89 1.14 -1.64 1.48 2.08 - -2.48 -7.04 -2.02 0.23 -0.65 1.31 -2.34 2.85 -0.35 1.44 1.7 -6.24 - 2.94 -0.17 -3.7 0.85 0.77 - -3.86
-1.34 1.16 -0.56 -0.82 -0.87 -3.97 -1.38 -5.19 - -7.69 - - - 2.7 0.97 -0.59 -2.02 -1.34 -0.02 0.9 -0.55 -0.41 -0.5 -1.5 -1.04 -0.86 2.17 -0.1 -0.13 -3.41 -0.62 -2.69 -0.79 -0.02 -0.86 -0.31 0.1 0.68 1.25 -1.67 2.88 -0.89 -0.65 0.93 -1.61 - -4.35 -0.77
-4.81 -0.03 0.39 1.92 -0.74 -2.58 2.02 -3.62 -4.99 -5.5 -4.78 - -5.1 -0.19 0.28 1.27 -2.44 -1.77 -0.41 0.45 -2.48 0.5 -0.03 -0.27 -2.67 0.66 -0.9 -2.43 -1.49 -4.7 -1.66 -0.38 1.15 0.02 -0.52 0.96 2.1 0.96 2.0 -3.52 - 1.85 -0.1 -2.88 0.57 - - -4.45
-1.86 -2.89 -3.62 -5.09 -3.27 -2.43 -5.87 -4.53 - -6.0 - -5.43 -5.47 -1.08 -4.44 0.93 0.38 -3.08 -1.0 0.57 -5.39 -0.4 1.26 -1.88 -5.43 -1.52 -2.78 1.23 0.19 -6.29 -3.99 -6.0 -0.0 -3.72 -1.66 2.47 3.56 2.75 2.36 -2.46 - 0.7 -0.15 -6.42 -1.54 - - -8.19
1.44 2.83 0.31 -0.69 -1.57 1.67 -0.94 1.01 -0.89 -1.26 -2.92 -6.1 0.49 0.56 0.54 0.09 -1.08 -0.78 -1.39 -0.45 0.03 -0.69 -0.66 -0.27 0.16 0.33 0.85 -2.48 -2.57 0.19 -0.68 -1.13 -0.61 -0.74 -0.37 -0.01 0.5 1.2 0.33 -1.41 -1.57 -0.02 -0.68 -1.25 -1.13 - -6.53 -0.81
AT2G04430 (NUDT5)
1.2 0.13 0.98 0.24 1.16 0.26 0.29 -2.03 -1.15 -3.47 -1.11 0.79 -4.18 0.38 0.1 0.29 -1.4 -1.63 -2.18 -0.34 -0.91 -0.39 -0.31 -1.15 -2.02 -1.18 -1.26 -1.19 -0.77 -2.21 -0.92 0.46 -0.91 0.18 -1.25 -1.57 -1.01 -0.32 0.46 -7.13 -3.9 3.17 1.14 0.68 1.45 - -12.2 -0.04
AT2G04450 (NUDX6)
4.0 0.02 1.03 0.24 0.51 -2.42 -0.03 - - -7.38 -5.96 -3.19 -4.2 -2.19 -1.53 0.76 -4.7 -7.38 -4.75 -0.4 -3.41 -0.94 1.07 -2.43 -7.18 -3.37 - -0.09 -1.03 -7.71 -0.36 -1.21 -0.07 -2.93 1.73 -0.87 -2.14 2.16 -0.71 -4.56 -4.91 -2.34 -1.68 1.53 -0.77 - -0.36 0.24
-0.51 1.24 2.31 - - - - - - - - - - - - - - - 1.59 - 3.55 - - - - - - - 3.64 - - - 2.11 - - - - -2.04 0.21 - - - 2.71 - - - -0.98 -
- - - 2.41 - - - - - - - - 1.74 - - - - - - - - - - -3.07 - - 5.11 - 2.08 - - - - - - - - - -1.32 - - - - - - - - -
1.35 -2.55 0.69 2.26 0.92 - 1.62 -1.93 -0.17 -0.55 -0.46 2.4 4.6 - - - - - -2.36 -2.52 - - - - - - - - -1.77 - -3.78 - -2.83 - - -1.41 - -3.47 -3.26 - - - -1.33 - - - - -
AT2G24850 (TAT)
-3.9 -6.59 -8.26 -9.75 -8.76 -6.67 - - - -11.38 -9.79 -7.08 -7.79 -4.94 -7.09 0.98 -9.94 -8.52 -8.76 -4.95 -7.36 -4.74 -3.98 -5.97 -7.54 -8.24 -4.7 -7.04 - -9.93 -6.25 -7.7 -4.28 -5.82 -2.29 -3.17 0.27 0.02 0.53 -0.83 -3.37 -0.3 -6.34 -2.23 -0.48 1.57 5.17 -2.07
3.86 -1.54 1.16 - 1.47 -1.72 - 0.01 - -2.76 - 0.57 -0.1 1.44 - -2.49 - - -2.79 -1.91 - - -1.26 1.7 - -0.99 - - 1.15 - 2.61 -2.06 0.23 -0.53 0.54 - -1.13 0.85 -0.18 - - -0.25 -1.16 - -1.16 - - -
-1.34 -2.2 -1.59 -3.88 -2.31 -5.33 -5.3 -4.7 -4.95 -5.54 -4.73 0.75 -2.67 -2.01 -4.41 -0.87 -5.37 -6.15 -4.15 -4.01 -5.34 -3.65 -2.01 -4.33 1.07 -3.51 -4.4 -3.77 -2.44 1.5 -2.14 1.61 0.38 1.65 -2.21 -2.71 0.45 1.64 1.47 -0.65 -2.13 3.33 0.27 1.44 1.06 - 2.21 0.18
1.85 -7.79 - - - - -4.75 - - - - - - - - 1.88 - - -7.41 -6.86 - - - -6.51 - -6.3 - - 2.46 - - -7.33 -0.55 -2.48 -7.26 - 4.12 3.1 2.64 - - 0.07 - -5.12 0.06 - - -5.3
- - - - - - - - - - - - - - - - - - 1.24 - - - - - - - - - 5.45 - - - - 0.55 - - - - -0.82 - - - - - - - - -
5.35 2.0 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.66 - - - - - - - - - - - - - - - - -
0.1 -4.53 - 0.39 - - -0.75 - - - - - - -0.85 - 2.43 - - - -1.79 -2.93 -1.97 2.15 -3.1 -3.07 -1.74 - - -0.36 - -2.99 - 1.54 -2.42 -1.34 0.0 2.29 2.11 4.04 0.04 - -0.8 - - -0.39 - - -
-0.56 -0.04 -4.62 -1.26 -0.91 - -1.27 - -4.53 -5.76 -2.73 - - 1.68 -1.76 3.05 -2.9 - -4.26 -0.07 -0.93 -0.19 1.3 -1.38 -2.83 -1.88 -4.52 -3.29 0.39 - 0.77 -2.94 -0.84 -3.9 -0.7 0.63 0.41 2.9 1.6 2.54 1.38 -0.61 -3.33 - -4.32 - -7.44 -
-5.55 -2.74 -5.8 -5.61 - -6.08 - -7.14 - - - - - 2.5 0.79 -3.94 -4.74 -1.9 4.18 -1.65 2.67 - - -4.15 -7.01 -5.66 - -3.32 -5.95 - -4.53 -1.53 -2.37 -1.97 -2.81 -6.61 -2.36 0.65 -2.92 - - -0.8 -2.15 2.07 2.07 - -9.63 1.54
2.08 -3.64 -0.34 -1.85 -0.14 0.06 - -2.46 -1.17 -2.01 - - - - - 2.23 - - -1.34 -0.62 - -0.89 1.08 -7.45 - - - -0.82 0.48 -2.74 -0.75 0.31 -0.64 -0.39 -0.01 - 0.04 2.24 -1.91 - - - 1.59 -1.27 3.95 - - -3.04
AT3G61190 (BAP1)
1.02 -2.73 -4.31 -3.03 -2.57 -2.56 -4.22 -7.92 -5.78 -7.13 -5.72 -5.89 -0.54 -3.87 -3.01 0.43 0.72 -0.12 -1.65 0.54 -2.08 -0.15 0.27 1.46 -1.15 1.65 1.52 -1.08 0.22 -5.02 -2.79 -2.37 -3.46 -2.56 -4.59 1.73 3.66 -1.74 0.67 -2.47 -1.73 -0.49 -2.75 -3.6 -1.07 - 2.26 -2.61
-4.25 -2.26 2.05 -0.03 2.58 0.69 0.86 - - - - - - - - 1.82 -0.23 - -0.22 - 1.2 - - -5.54 - - - - 0.93 -1.83 -2.44 -1.72 0.55 1.64 - - 1.95 3.51 0.22 - - 0.97 - - - - - -
1.15 0.51 - - -1.0 0.91 - - - 1.91 - - - - - - -0.59 - -1.94 0.43 - 0.44 - -0.02 0.34 -1.48 - 2.05 3.63 -2.14 -1.22 -1.04 0.49 2.16 -0.98 -0.4 - 0.72 0.59 - - 0.61 -0.33 - 0.7 - -4.55 -
-0.9 -1.2 0.49 - 3.22 2.41 - - - - - - - - - -1.28 - - -0.04 - - - - - - -2.3 - - -0.62 - - 0.58 -1.49 2.46 -2.52 - - -1.02 -4.15 - - 3.54 1.4 - 2.15 - - 0.95
0.82 - - - - 1.0 - 1.13 - - - - 4.41 0.66 - 0.14 - - - - - - - - - - - - 3.67 - 0.52 - - - - - - 1.68 -0.4 - - - - - - - - -
AT4G39030 (EDS5)
-0.08 -0.25 - - - -7.98 -9.14 -5.18 -6.93 -5.41 -5.28 -1.99 -2.77 -1.64 -0.01 -0.43 0.27 2.04 -4.45 -0.98 -2.73 -3.4 -4.57 -2.84 -1.57 -5.22 -4.3 -4.81 -3.42 -1.11 0.59 -0.09 -1.47 0.41 -4.31 0.57 0.36 0.25 -0.22 -1.91 -4.51 2.82 2.04 -2.03 1.53 3.05 1.93 -0.78
AT5G01900 (WRKY62)
-1.69 -2.81 1.66 -1.5 1.72 -3.87 -1.45 - - - - - -4.19 -5.19 - 1.75 - -3.81 -5.43 -3.12 - - - -1.15 - -2.56 -3.62 - 0.29 - -0.72 - -2.48 -0.17 -5.8 -3.48 3.08 3.35 1.18 - - 1.97 2.29 -0.82 0.06 - - 0.72
-5.94 -5.28 - -8.06 - -5.53 -6.99 - - -9.57 - - - 0.23 -2.81 0.72 -3.27 -0.51 -2.33 -2.26 -5.9 1.79 0.83 -2.11 -6.42 -3.51 -7.93 2.25 -4.38 -6.35 -5.7 -3.15 1.39 -1.9 4.34 -0.3 -2.03 1.78 1.75 -2.31 - - - - -4.96 1.0 - -9.19
-1.07 -6.08 -4.69 -4.48 -3.15 - -3.23 - - - - - - -2.8 - -1.29 - - -6.5 -4.46 - - -5.49 -4.09 1.26 -5.67 -3.21 -4.45 -3.55 2.07 - -1.66 -3.4 -1.39 -5.5 -0.6 4.85 -0.37 2.24 -1.46 - 1.58 -1.78 - -2.31 - - -4.36
-0.14 -4.72 -4.07 - -4.63 - - - - - - - - -3.8 - -0.4 - - - -4.19 - -2.7 -0.83 -3.3 2.87 -5.07 - -1.1 0.59 2.5 -6.48 -2.38 -3.92 - -1.28 0.63 4.6 1.33 -0.83 - - - -2.35 -2.35 -1.94 - - -3.52
AT5G22570 (WRKY38)
-4.27 -5.63 - - - - - - - - - - - -1.88 - 2.72 -0.31 0.9 - -6.05 -3.56 - - -1.39 - -0.64 - -4.32 -3.8 - -3.91 -2.65 -0.74 0.44 -5.16 -0.85 0.66 2.7 -0.28 - - 3.77 3.06 0.49 -1.76 - - 0.81
-2.35 -1.81 - -3.48 -3.01 -2.25 -2.76 -2.39 - -3.85 - - - -3.21 -3.44 2.78 - -4.97 -4.28 -4.54 - -4.94 -2.15 -2.68 - -2.28 -3.63 -3.39 4.17 - -5.89 -3.32 -0.19 -3.81 -3.43 -3.5 -1.66 3.85 2.05 - - -1.19 -2.86 - -4.41 - - -
-3.91 -6.05 - - - -7.22 -5.8 - -7.21 - - - - 1.99 -0.55 2.32 -6.91 -6.29 -5.65 -5.14 -4.19 - -5.85 -1.98 -2.85 -0.51 1.14 -6.72 -2.19 -5.29 -6.95 -1.7 2.99 -0.65 -6.53 -5.82 1.56 1.85 4.2 -1.01 -3.83 -3.84 - - -3.94 - - -
AT5G24540 (BGLU31)
-1.66 - - -1.93 - - - - - - - -1.81 - - - 0.85 - - -4.55 -3.67 - - -2.86 -5.29 - - - - 0.06 - - - - -2.66 -5.76 - 5.13 0.39 2.87 - - - - -2.25 - - - -
AT5G26170 (WRKY50)
-0.42 2.5 -1.22 -1.52 -0.75 -2.8 -1.6 -4.22 - - - -3.57 - 0.89 0.19 0.73 -0.13 -0.93 -1.71 1.37 0.94 0.45 0.8 -0.64 -1.55 -0.74 -1.71 0.29 2.25 -2.27 0.74 -0.17 0.07 0.06 0.39 -1.22 0.15 1.45 0.48 -5.49 - 0.12 0.6 0.89 -1.69 - -10.84 0.15
-4.29 -2.05 -3.24 -1.54 -2.19 - -2.23 - -4.28 - - -2.06 -4.61 0.11 -0.84 3.5 -3.99 - -1.63 -1.93 -1.23 -0.16 1.21 -0.53 -4.17 -2.09 - -2.21 0.97 -3.69 1.11 -4.02 -0.09 -1.12 0.45 -1.58 1.47 3.66 1.2 -3.87 -1.73 0.79 -1.5 -3.24 -1.5 - - -
1.04 -0.34 0.44 -0.32 0.04 -3.5 0.12 - -1.34 -4.87 -0.85 - -4.38 -0.5 -1.16 0.21 -2.62 -2.32 -2.12 -0.49 -1.55 -0.71 -0.39 -0.77 -4.17 -1.1 -0.28 -0.36 -0.58 -3.29 -0.54 0.55 -0.18 1.29 -0.02 0.44 1.53 1.32 0.42 -4.23 - 2.56 1.74 1.02 1.71 - -1.81 0.59
0.18 1.3 -0.34 -2.44 -0.27 - -1.89 - - - - - - -0.04 - 4.22 -0.35 -1.98 -2.66 2.89 - -1.37 0.97 1.04 -2.93 0.44 - -2.41 - - -0.19 -3.44 -0.15 -3.11 -2.1 -0.93 -0.01 1.31 -0.51 -2.33 - -0.53 -2.44 - - - - -
- - - - - - 0.45 - - - - - - - - -0.43 - - - - - - - - - - - - -2.77 - - - 0.47 1.42 - -0.5 -1.4 2.22 3.25 - - 3.81 -1.44 - 3.58 - - -
- - - - - - - - - - - - -1.06 - - 0.81 - - - - - - - -1.65 - - - - -1.7 - -1.23 - 1.4 - - -0.36 -0.25 5.27 0.81 - - - - - - - - -
- 1.21 1.74 - - - - - - - - - - - - 2.87 - - - -1.74 - - - 1.28 - 1.84 - - - - -0.58 - 2.62 - - - 1.77 2.23 3.79 - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.