Heatmap: Cluster_221 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-0.31 -0.57 -1.41 0.41 0.08 0.23 0.38 0.4 0.89 0.65 0.96 0.76 -0.82 -0.2 -3.58 -0.06 -0.58 -0.55 0.11 -0.32 -0.56 -1.08 -0.58 0.61 -0.16 -0.1
-0.59 -0.68 -0.83 -0.07 -0.34 0.07 -0.65 0.45 0.87 0.8 1.19 0.21 -1.9 0.32 -0.25 -0.7 -1.1 -0.51 -0.42 -0.36 0.19 -1.7 -0.53 0.64 0.45 0.68

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.