Heatmap: Cluster_220 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
- -3.85 -2.65 - -3.23 -1.15 -5.14 -5.69 - -2.98 -3.83 1.85 -1.97 -5.54 5.4 - - - -0.76 -3.45 - -3.18 - -7.46 - - - - -6.36 - -7.79 -4.93 -7.59 - - - -5.07 - - - - - - - - - - -
- -1.05 0.43 -0.16 -0.39 0.59 -0.7 - -2.1 -1.55 - -1.05 - 1.53 4.83 -1.98 - - 2.39 -2.74 - -2.17 - -5.66 - -2.22 -0.61 - -0.23 -0.54 - - - - - -1.72 - - -5.49 - - - - - - - 0.51 -
3.51 -2.56 -3.2 -3.91 -4.46 -4.48 -3.15 - -4.37 -4.55 - - - - 3.11 -5.02 - - 0.04 -3.57 - -3.17 -4.02 0.15 - -0.02 -3.13 1.16 4.27 -4.2 - -6.0 -3.85 -3.29 -7.01 - - -2.96 -4.61 - - 0.8 - - -2.91 - - -
-5.4 -0.87 -2.38 - -1.11 -0.22 - - - -2.79 - - - -2.92 4.03 0.13 -0.86 - 4.33 -2.85 -1.1 -0.28 - -3.5 - -1.85 - -1.21 2.0 -4.1 -3.2 -3.87 -3.73 -4.38 -1.86 -2.32 -2.22 -1.82 -4.72 - - - - - - - - -
- -2.55 -3.52 - - -0.46 -2.0 - - -3.38 - - - - 4.31 0.86 3.07 - 0.51 -1.39 - -2.22 - 0.14 - 0.91 - -0.12 3.39 - - -4.58 - - -6.93 - -2.93 -5.66 -6.9 - - - - - - - - -
- -2.6 -3.5 -3.49 -2.99 - -2.39 -2.97 - -4.8 - - - -0.67 4.88 1.85 3.43 - -5.08 -3.2 -2.69 -1.36 -3.48 -3.25 - -3.22 -1.45 - -3.47 -3.24 - -2.7 -3.18 -3.33 -3.36 -1.45 -3.34 -2.72 -3.46 - - - - - - - - -
4.56 -2.69 - - -3.0 -0.38 -3.28 - - -4.25 - - - 0.36 2.8 - - - 1.64 -5.02 - - - -5.12 0.12 - 3.4 - -4.29 - - -4.56 - - - - - -7.25 - - - - - - - - - -
- -1.19 - -2.87 -1.7 - -1.28 - - -3.51 - - - -3.55 4.96 - - - 3.66 -2.73 - - -0.91 -4.3 - -5.09 0.69 - -3.3 -3.18 -5.34 -3.5 - - - - -2.85 -6.62 - - - - - - - - - -
- -1.73 -1.91 - -3.26 - - - -2.77 -3.12 - - -3.51 - 3.93 - -1.86 -2.98 4.87 -3.44 - -3.09 -0.02 -4.73 - -3.73 - -2.54 -1.26 - - -4.66 - -4.9 -5.34 - - -6.63 - - - - - - - - - -
1.92 -3.12 - -0.77 -0.52 -0.34 - -2.4 - - - - - -1.77 5.28 - - - 1.23 -3.35 - -1.81 - - - - - - - - - - - - - - - - - - - - - - - - - -
AT1G24020 (MLP423)
-3.9 1.15 -9.6 -8.7 -9.62 -13.0 -8.37 -13.16 - -10.62 -11.11 - -11.32 0.72 2.06 2.32 2.47 3.31 0.69 2.07 0.96 1.29 1.14 -0.59 -8.16 -2.86 -8.43 -12.5 -9.06 -8.52 2.02 -1.93 -1.97 -0.89 -1.2 -2.74 -6.08 -1.1 -4.81 - - -5.76 -7.28 - -7.14 - - -12.17
AT1G28430 (CYP705A24)
- -3.02 -2.59 - -3.3 -2.77 -3.94 -1.09 - -1.56 -4.02 - - -2.28 4.75 -4.99 - - 3.63 -2.59 - -0.67 -2.35 -0.55 - -1.11 - -0.4 0.16 -2.44 - -1.66 -5.24 -5.13 -1.78 0.42 -1.28 -1.78 -5.75 - - - - - - - - -
- -2.42 -2.85 -1.01 -1.15 -2.04 -1.03 - -2.99 - - - - -3.91 5.49 - - - -1.01 -3.79 - - - - - -4.74 - - -4.0 -4.45 - -4.65 - - - - - -7.46 - - - - - - - - - -
AT1G49430 (LRD2)
-3.03 1.28 - -9.89 -7.06 -7.11 -8.92 - - -11.56 -11.07 - -8.66 0.59 1.26 1.91 2.81 1.41 -0.33 1.33 2.17 0.99 0.74 1.11 -5.92 0.46 -3.56 1.67 -1.86 -7.42 1.34 0.56 -0.63 -0.24 0.29 0.35 -5.86 -0.39 -2.96 -3.53 -3.74 -1.65 -8.58 - -2.61 - - -10.05
AT2G01500 (PFS2)
- 3.77 - 0.61 -2.85 - -0.64 -2.64 - - - -4.24 -2.24 -3.64 1.27 - - - -4.25 4.59 1.63 - - - - - - -2.27 - -3.16 - - - - -5.34 - -1.41 -1.13 -5.17 - - - -2.32 - - - -0.87 -
AT2G17950 (WUS)
- 2.05 -2.72 - -3.12 -2.39 -2.57 - - - - - - -2.06 4.18 - - - 3.58 2.84 - - - -3.34 -3.93 -5.56 -2.89 0.12 -3.9 -3.74 -6.9 -1.72 -3.61 -3.03 1.56 - - -0.6 -8.13 - - - - - - - - -
AT2G23800 (GGPS2)
-10.29 0.79 -3.19 - -4.99 -3.98 -3.58 - -6.53 -5.31 - -5.31 - -0.39 4.68 -6.22 - - 3.52 -2.68 - -4.87 - -3.09 -1.26 -4.82 2.54 -6.08 -0.48 -3.91 -0.96 -5.71 - -8.27 -8.85 -6.2 -6.37 -3.35 -6.72 - - - - - - - - -
AT2G28470 (BGAL8)
-3.79 2.34 -2.95 -2.2 -2.49 -3.44 -2.0 -8.89 -6.53 -8.36 -8.93 -6.39 -8.41 0.07 2.62 1.24 1.55 1.67 -1.99 2.13 1.68 0.03 0.17 0.6 -3.89 0.01 -4.89 -0.97 0.38 -4.2 1.28 0.38 0.3 -0.13 -1.79 -0.21 -4.55 -0.65 -2.26 -3.3 -3.84 1.53 -2.25 -4.75 -0.93 - -4.92 -4.43
AT2G31980 (CYS2)
-1.29 -2.55 -4.58 -5.07 -2.79 -0.62 -3.22 -2.44 -1.94 -5.11 -3.47 -5.14 -6.46 -3.83 3.82 -0.72 2.12 -1.46 1.89 -0.68 0.62 -2.2 -1.73 -2.33 0.74 -2.58 -5.65 -0.15 0.75 -0.3 -3.87 2.0 -0.77 2.51 -4.61 -1.83 -4.02 1.32 -1.27 -4.81 -2.52 -1.6 -1.86 - -5.88 - -12.87 -6.33
AT2G33810 (SPL3)
-2.16 1.71 -6.95 -8.47 -7.33 - -10.07 - - -11.69 - - - 0.82 0.77 2.18 -0.17 -1.03 -3.88 2.32 1.57 2.2 2.76 1.39 -7.85 1.25 -6.1 -5.67 -5.5 -7.97 2.32 -7.56 -3.46 -4.16 -0.43 1.58 -1.74 -0.75 -0.45 -4.09 -4.43 -9.11 -8.45 -7.43 -5.01 - - -8.58
AT2G33880 (STIP)
-1.73 3.42 - -7.81 -5.8 -5.48 -6.74 - - - - - - -0.41 0.1 -2.66 -3.0 -0.53 -3.06 4.03 -0.17 -5.68 -7.71 0.47 -1.1 -0.66 -4.41 1.12 1.6 -1.21 0.96 1.47 -4.86 -3.53 0.83 -6.79 - 0.74 -11.08 - - -6.78 -2.54 -5.11 -5.37 - - -5.82
-2.3 - - - - - - - - - - - - -0.86 2.56 - - - 5.29 -4.19 - - - - - - - - -0.76 - - -2.51 - 0.11 - - - -2.84 -1.93 - - - - - - - - -
AT2G42200 (SPL9)
-7.76 1.97 - -7.79 -8.42 -5.9 -6.82 - - -8.11 - - -10.03 1.02 0.76 2.09 -1.72 -0.92 -2.12 2.51 0.39 2.84 3.62 -1.09 -6.66 -1.3 -4.63 -3.46 -4.55 -7.93 -0.6 -2.89 -2.0 -4.88 1.38 1.25 -2.23 0.1 -4.72 -6.3 - -7.34 -6.93 -6.35 -4.67 -5.92 -8.99 -7.6
AT2G47240 (CER8)
-4.88 1.45 -7.67 -8.62 -6.56 -8.18 -7.52 -8.91 -10.83 -10.11 - -8.5 -8.46 1.21 2.83 1.3 1.64 1.64 0.28 1.56 0.69 1.72 1.51 0.99 -3.76 0.66 -4.9 -0.17 0.32 -3.72 0.78 -0.42 -0.62 -1.53 0.22 0.97 -2.43 0.33 -2.6 -4.49 -0.55 -3.26 -5.29 -7.3 -3.86 - - -3.07
AT3G01140 (NOK)
-0.64 2.05 -1.05 -1.41 -0.79 -1.49 -0.99 -6.71 -8.72 -6.5 - -9.0 - 0.79 2.81 1.02 1.74 0.96 0.01 1.57 1.41 1.57 0.62 0.16 -4.13 -0.32 -1.81 -0.68 -1.03 -5.11 1.11 -0.18 0.21 -0.51 -0.01 0.01 -1.44 0.01 -1.86 -3.38 - -2.93 -2.71 -1.21 -1.52 -1.64 - -1.89
AT3G03540 (NPC5)
- -5.28 -1.74 -3.71 -1.64 -2.77 -4.1 -4.25 - -6.32 -3.78 -1.26 -5.43 -1.99 2.79 -5.76 - - -2.67 -5.84 - -4.69 -3.67 -7.1 1.6 - 5.15 - - -2.16 -4.89 - -5.35 - -6.33 -4.74 -4.91 -6.15 -4.33 - - - - - -3.65 - - -
AT3G04290 (LTL1)
-2.54 2.02 -4.49 -4.43 -4.58 -6.78 -4.41 - -10.62 -9.75 - -12.2 - 1.98 2.07 2.18 -5.21 -2.4 1.69 2.4 -3.41 2.24 1.23 -1.17 -6.73 -3.19 -7.35 -2.64 -11.54 -7.22 0.67 1.27 0.91 1.28 1.55 0.6 -7.13 0.49 -3.05 -6.56 -9.87 - - - -6.74 - - -
-2.55 2.98 - - -2.96 -3.11 - -4.29 -2.48 -5.18 - -5.59 1.08 -1.17 1.79 -1.65 -0.1 0.54 -1.81 3.0 - 2.75 3.65 -1.51 -5.45 -2.6 -5.16 - -3.87 -5.31 -1.65 -7.23 - -6.06 0.37 -1.04 - -1.83 - - - - - - - - - -
AT3G25050 (XTH3)
- -1.17 -2.13 -2.77 -1.1 -1.41 -1.86 - -5.73 -2.77 - -5.17 -3.64 - -0.09 -2.48 -5.7 - 5.09 -2.26 - -2.31 -5.55 -0.16 -1.8 1.16 2.44 - -6.02 -4.83 -6.46 -2.1 -3.57 -5.4 -5.77 -1.71 -1.15 -4.94 -4.79 - - - - - - - - -
-7.6 -1.17 -3.98 - - - - - - - - - - -2.0 - -2.52 -2.08 - 5.3 -1.65 - -1.87 -2.48 -1.12 - -1.43 -1.57 -0.58 -0.4 -5.31 -4.96 -1.97 -2.89 -1.24 -3.61 -1.18 - -1.74 0.17 - - -2.51 -0.27 -2.83 -3.42 - - -3.62
AT3G50070 (CYCD3;3)
2.64 2.47 -5.34 -3.6 -4.14 -4.33 -3.82 - -9.42 -11.8 -9.11 -6.8 -6.92 0.13 -0.83 -0.81 -0.97 -1.33 -1.75 2.34 -0.98 -1.96 -0.94 -0.52 -3.47 -1.47 -1.99 1.74 -0.41 -3.29 1.65 -0.47 -1.56 -0.76 2.52 -1.24 -2.21 -0.2 -5.04 -5.59 - -0.83 -1.41 1.24 -0.09 0.11 1.1 -0.06
AT3G52810 (PAP21)
- -1.86 - - -1.42 -2.04 - -1.6 - -3.62 -3.24 -3.74 -2.84 0.1 4.34 0.16 -3.34 - 3.89 -2.89 - -1.14 - -2.72 -0.87 -2.64 2.0 - 0.6 -2.92 - -4.68 -4.55 -3.73 - -2.14 0.19 -4.68 -2.3 - - - - - -3.05 - - -4.28
- 3.35 -4.21 -4.04 -1.65 - -0.54 - - -3.13 - - - 4.6 2.01 1.44 -2.12 - -0.43 -3.34 - -1.82 -3.94 -1.08 -3.42 -2.1 1.5 - -3.73 - -2.08 -5.66 -6.42 - -6.58 -3.02 - -4.31 -7.62 - - - - - - - - -
AT3G57920 (SPL15)
- 1.58 -4.11 -3.82 -4.55 -5.21 -3.61 -6.87 -7.66 -8.97 -5.06 - -5.74 0.2 0.78 1.3 -1.5 -2.08 -2.61 1.83 -1.59 2.76 3.53 -1.44 -7.59 -1.68 -5.78 -0.21 -0.79 -6.28 -2.32 -2.94 -1.15 -2.7 2.44 0.92 -3.69 0.66 -4.54 -2.48 -4.31 -2.43 -1.25 -1.1 -0.38 0.97 -10.36 -2.06
1.14 3.28 - - -0.35 -1.61 - -2.16 -0.34 -3.43 -1.21 -1.29 -2.76 0.22 -0.26 -1.88 - - -2.95 2.52 - -1.42 - 1.36 -2.32 1.94 2.39 -1.8 0.55 - 2.73 -2.66 - -4.68 -3.81 -1.91 0.78 0.37 -3.01 - - - - -2.24 - - - -2.42
-1.87 3.81 -3.19 -3.05 - - - - - - - -3.22 -2.41 -3.86 -0.49 - - - -5.0 4.81 - - - -8.65 - -4.2 -1.68 - -2.95 - 0.89 - - -5.38 0.56 - - -1.11 -6.9 - - - - - - - - -
-2.97 -0.29 -0.82 2.13 0.92 0.13 2.7 -5.47 -3.68 -4.74 -3.97 - - -3.13 1.7 -4.3 -3.1 -1.98 4.09 -2.16 -1.76 -3.78 -2.32 -2.72 - -2.11 -2.63 -2.0 -1.57 -5.14 -2.84 -2.8 -3.08 -3.17 -3.19 - -2.5 -2.09 -4.26 - - 0.24 0.61 -0.56 -0.32 - 1.88 -0.53
-2.97 3.09 - - - - - - - - - - - 1.8 1.38 -0.79 -2.16 -0.19 -4.33 3.46 -3.46 -1.65 -0.2 -1.21 -6.25 -1.36 -3.9 0.92 -2.22 - -2.02 -2.66 -1.76 -2.08 2.88 -0.59 -6.02 1.55 -4.96 - - - - -2.59 -5.75 - 2.02 -3.2
AT4G39330 (CAD9)
-2.23 1.57 -7.71 -8.04 -6.72 -8.24 -6.72 -13.45 -10.07 -10.38 -11.37 -10.23 -11.02 0.75 2.08 0.84 1.48 2.54 -1.28 1.9 1.85 1.51 1.44 0.94 -7.21 0.26 -6.97 0.18 -1.59 -8.35 1.75 0.32 -0.19 0.89 0.53 -0.26 -7.46 -0.65 -2.92 -6.71 -3.95 -10.32 -11.84 -10.65 -3.78 - - -12.96
AT5G07530 (GRP17)
- -4.5 -3.39 -3.73 -1.82 -1.69 -2.81 -6.09 -4.62 -4.32 -7.6 - - - 4.53 -5.36 - -10.44 4.45 -3.04 -0.56 -3.06 -8.5 -5.26 -6.79 -6.45 -3.39 -8.42 -0.36 -5.13 -9.35 -4.83 -8.11 -6.5 -7.3 - -4.82 -9.34 - - - - -10.04 - -6.03 - - -10.26
AT5G07540 (GRP16)
- -2.25 -5.05 -3.6 -2.52 -2.21 -2.95 - -4.9 - - -3.66 -4.42 - 5.22 - - - 3.03 -1.65 - -2.24 -4.59 -3.7 -4.83 -5.08 -4.45 -3.45 -2.38 -3.37 -5.41 -2.53 - -5.0 -6.92 - -3.46 -6.48 - - - - - - - - - -
- -0.84 -3.91 - - - - - -3.08 - - - - 4.22 1.88 0.4 - -2.58 -0.87 -3.56 - -4.14 - -1.2 - -1.1 0.56 -0.79 2.28 -5.57 0.06 0.69 0.4 1.0 -2.28 -2.71 0.94 -1.46 1.29 - - 0.99 0.07 -3.04 -3.62 - - -0.8
- -0.1 -0.5 - - -0.68 - - - - - -2.12 1.81 3.42 -0.23 -0.02 -0.88 0.24 1.53 -2.82 - -1.74 - 1.21 - 0.92 -0.18 - 1.9 - 0.23 -1.6 -0.16 1.44 -0.86 0.63 1.35 -1.01 0.46 - - 1.9 - - - - - -2.31
- -0.49 - - - - - - - - - -2.05 0.64 3.41 0.71 0.44 -0.11 -0.75 2.45 -1.57 - - - 1.3 - 0.5 1.36 0.34 0.65 - 1.18 -0.46 0.75 1.44 -0.54 1.02 0.4 -0.68 -0.09 - - 0.9 - - -1.27 - - -
-3.0 1.5 -8.37 -9.01 -5.86 -8.06 -9.95 - - -9.88 -9.14 -10.35 - 0.04 1.24 1.34 0.68 2.29 0.75 2.11 -1.21 2.01 3.41 -0.79 -7.39 -2.47 -6.47 -6.02 -7.42 -7.89 1.83 -0.71 -1.2 -0.79 0.99 1.12 -9.21 0.37 -4.69 -6.85 - - -9.98 - -7.14 - - -9.54
-0.35 1.3 0.35 0.5 0.33 -0.71 -0.45 - - -6.91 -4.61 - - 0.91 1.15 0.68 1.27 0.72 -1.26 1.15 0.65 0.81 0.88 0.14 -2.79 -0.17 -0.93 -0.2 0.65 -2.95 0.99 -1.12 -0.46 0.24 0.08 1.4 -0.59 0.26 -0.34 - - 0.76 -0.03 -0.03 0.77 - - -0.84
- -2.6 - - - - - - - - - - - - - - - - 5.56 -3.43 - - -2.21 -4.65 - - - - - -1.76 - - - - - - - -6.69 - - - - - - - - - -
- -2.04 1.55 -0.3 0.62 1.72 -0.65 - - 0.25 0.14 1.01 2.12 - 3.1 - - -0.61 4.3 -1.67 - - - -2.65 - - - - - - - -1.94 - - - - - -1.82 - - - - - - - - - -
-2.91 -5.01 -4.88 -1.52 - -4.16 -0.8 - - - - - - - -1.17 -2.71 -1.83 -1.78 1.74 -4.67 -4.96 -1.54 -2.85 -2.86 4.24 -3.11 -2.7 0.87 -2.29 3.79 - 0.81 -0.1 -2.35 -2.39 - -5.0 1.41 -4.04 -1.17 - - -1.74 - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.