Heatmap: Cluster_114 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-1.28 0.14 0.1 0.63 1.19 1.07 0.49 0.46 -1.34 -1.01 -1.51 -2.09 -1.56 -1.29 0.24 -0.19 0.49 1.07 0.86 0.94 -3.04 -1.71 -2.66 -1.48 0.28 0.08
-1.07 -0.05 -0.12 0.14 0.85 1.06 0.53 0.26 -0.85 -0.6 -1.06 -1.4 -1.35 -0.56 0.38 0.26 0.64 0.63 0.94 0.85 -3.39 -0.45 -0.69 -0.75 -0.46 -0.37
-4.08 -1.22 0.36 0.37 1.01 1.48 1.95 1.49 0.51 -0.95 -2.45 -3.22 -6.42 -1.71 -1.14 0.04 -0.35 0.2 0.83 0.98 - -1.9 -3.05 - -0.01 -1.48
-1.24 0.14 0.02 0.34 1.01 0.91 0.67 0.38 -0.84 -0.33 -0.95 -1.27 -1.81 -0.82 0.27 0.56 0.63 0.94 0.86 1.11 -5.64 -5.05 -1.53 -1.7 -0.41 -0.52
-1.96 0.38 -0.15 0.39 1.28 1.58 1.34 1.0 0.46 -0.3 -0.67 -1.64 -3.73 -1.71 -0.71 -0.53 -0.02 0.42 0.8 0.39 -4.16 -1.9 -1.42 -1.91 -0.33 -1.62
-2.12 0.18 -0.01 0.26 1.05 1.2 0.77 0.41 -0.61 -0.88 -1.16 -2.51 -2.82 -0.41 -0.43 0.39 0.31 0.77 0.76 1.03 -4.17 -0.89 -0.53 -1.74 0.06 -0.08
-1.16 0.03 0.8 0.92 1.11 1.78 1.39 1.26 -0.06 -0.96 -1.62 -1.62 -2.89 -2.67 -1.13 -1.09 -0.4 0.09 0.6 0.65 -4.73 -4.27 -2.51 -2.92 0.15 -0.89
-1.42 0.02 0.26 0.51 1.0 0.89 0.56 0.27 -1.19 -0.76 -1.39 -1.75 -1.81 -0.16 0.8 0.33 0.71 0.99 0.84 0.98 -5.42 -2.32 -2.92 -1.74 -0.52 -0.28
-3.53 -0.3 -0.12 0.55 1.0 1.6 0.96 0.74 -1.06 -0.87 -2.1 -2.51 -4.78 -0.73 -0.04 0.6 0.3 0.67 0.63 1.16 -7.32 0.24 -3.29 -3.85 -0.3 -0.43
-3.16 -0.52 -0.03 0.41 1.27 1.58 1.21 1.01 -0.06 -0.85 -1.72 -3.34 -4.55 -1.42 -0.26 0.3 0.57 0.64 0.87 0.92 -6.75 -1.46 -2.77 -3.67 -0.38 -0.69
-1.3 0.11 0.21 0.54 1.31 1.47 0.97 0.76 -0.95 -1.0 -1.6 -2.2 -1.92 -1.47 -0.04 -0.13 0.49 0.68 0.78 1.19 -3.44 -3.9 -1.88 -2.56 -0.63 -0.59
-2.89 -0.5 -0.1 0.42 1.12 1.29 1.0 0.71 -0.61 -0.38 -1.25 -1.52 -3.21 -0.31 -0.0 0.35 0.47 0.69 0.98 1.03 -4.86 -2.53 -1.49 -1.46 -0.74 -0.47
-1.49 -0.52 -0.16 0.03 0.71 1.09 0.84 0.51 -0.0 -0.22 -0.51 -0.83 -1.93 -0.33 0.19 0.4 0.44 0.71 0.99 1.03 -3.11 -2.27 -1.81 -1.14 -0.64 -0.52
-1.28 0.33 0.24 0.54 1.02 1.15 0.89 0.4 -0.31 0.01 -0.61 -1.15 -1.35 -0.68 -0.48 -0.18 0.44 0.7 0.82 1.01 -9.15 -3.14 -2.68 -1.67 -0.6 -0.45
-2.41 -0.75 -0.31 0.2 0.84 1.19 1.44 1.12 0.21 -0.75 -1.15 -2.26 -3.3 -0.62 -0.5 0.6 0.31 0.46 0.54 0.55 -3.1 -0.48 -1.1 -1.96 0.28 -0.66
-0.37 0.47 0.17 0.32 0.78 0.24 0.25 0.27 -1.91 -0.63 -1.28 -1.26 -0.69 -0.94 0.08 0.26 1.09 0.9 0.84 0.92 -5.05 -1.52 -1.12 -1.54 0.18 0.07
-1.05 -0.09 -0.04 0.22 0.71 1.0 0.35 0.02 -0.4 -0.6 -0.89 -1.22 -1.5 -0.2 0.24 0.18 0.4 0.73 0.97 0.86 -2.88 -1.66 -1.09 -0.68 0.13 0.23
-2.9 -0.49 -0.12 0.0 0.76 1.34 1.31 0.89 0.44 -0.66 -1.17 -2.27 -4.29 -1.36 -0.27 0.28 1.02 0.54 0.61 1.01 -5.5 -1.18 -2.17 -1.89 -0.54 -0.17
-2.38 -0.42 -0.5 0.17 1.32 1.69 1.25 0.97 -0.78 -1.37 -1.92 -2.77 -3.68 -0.22 0.12 0.61 0.34 0.33 0.53 0.75 -3.75 -0.62 -1.24 -1.62 -0.62 -1.09
-1.3 0.24 0.06 0.43 1.25 1.32 0.78 0.49 -1.52 -1.22 -1.63 -2.04 -1.82 -0.9 0.03 -0.16 0.57 0.75 1.01 1.38 -2.96 -2.86 -1.97 -1.89 -0.72 -0.42
-1.91 -0.77 -0.46 -0.09 0.77 1.1 0.94 0.4 -0.15 -0.84 -1.18 -1.54 -2.44 -0.41 0.44 0.46 0.64 0.75 0.83 0.71 -1.87 -1.07 -0.41 -1.01 0.15 -0.46
-4.41 -0.78 0.24 0.4 1.31 1.72 1.44 0.76 -0.07 -0.75 -1.55 -3.46 -5.54 -0.73 -0.41 0.62 -0.1 0.3 0.79 0.99 -4.33 -3.46 -1.54 -1.27 -0.73 -1.28
-2.73 -0.38 -0.1 0.23 0.93 1.23 0.93 0.8 -0.5 -0.69 -1.3 -1.64 -3.37 -0.76 -0.08 0.26 0.56 1.06 0.91 1.04 -3.98 -2.94 -1.7 -1.38 -0.03 -0.28
-2.72 -0.55 -0.1 0.21 1.16 1.68 1.58 1.25 -0.36 -1.42 -2.46 -3.15 -4.54 -1.6 -0.36 0.16 0.57 0.74 1.05 1.19 -7.15 -4.69 -4.4 -4.72 -0.8 -1.54
-2.06 -0.31 0.08 0.4 0.99 1.22 0.98 0.79 -0.41 -1.05 -1.42 -2.2 -3.22 -0.63 0.08 0.2 0.52 0.92 0.97 1.17 -3.29 -3.86 -0.66 -1.36 -0.96 -0.92
-2.78 -0.77 -0.29 -0.0 0.9 1.28 1.04 0.76 0.1 -0.75 -1.15 -2.17 -3.53 -0.73 -0.31 0.73 0.69 0.43 1.13 1.0 -4.28 -0.94 -2.42 -1.0 -0.49 -0.37
-2.07 0.06 0.13 0.36 1.18 1.43 1.03 0.76 -0.97 -1.26 -2.17 -2.77 -2.98 -1.76 0.02 0.11 0.73 0.88 1.15 1.46 -4.2 -6.45 -5.01 -2.92 -0.91 -0.73
-2.39 -0.95 0.05 0.45 0.94 1.48 1.64 1.27 0.52 -0.39 -0.68 -1.94 -2.57 -1.77 -0.22 -0.16 0.41 -0.06 0.57 0.52 -4.85 -4.06 -1.34 -2.7 -0.29 -0.53
-2.44 -0.55 0.17 0.22 0.91 1.41 1.78 1.52 -0.04 -2.1 -2.17 -4.73 -2.62 -1.54 -0.68 -0.03 0.38 0.86 0.97 1.33 -4.3 - -3.63 -4.74 -1.42 -1.74
-2.96 -0.62 -0.09 0.25 0.93 1.74 1.76 1.41 -0.01 -1.1 -1.89 -3.47 -4.82 -1.59 -0.82 -0.22 0.29 0.65 0.88 1.25 -3.19 -4.91 -1.84 -3.86 -1.4 -1.66
-1.03 0.02 0.15 0.34 1.04 1.38 1.0 0.8 -0.52 -0.78 -1.25 -1.54 -1.5 -0.71 0.23 -0.16 0.41 0.65 0.79 0.89 -1.39 -2.76 -2.3 -2.52 -0.67 -0.67
-1.88 -0.8 -0.13 0.22 0.91 1.51 1.43 1.11 0.28 -1.26 -1.74 -2.57 -2.2 -0.8 0.15 0.61 0.48 0.48 0.67 0.59 -3.14 -2.15 -1.86 -2.59 -0.49 -0.7
-2.07 -0.11 0.0 0.3 1.1 1.16 0.96 0.67 -1.19 -1.27 -1.97 -2.72 -3.24 -1.18 -0.06 0.56 0.82 1.14 1.27 1.41 -4.26 -4.82 -3.55 -2.72 -0.97 -0.8
-1.98 -0.76 -0.06 0.3 0.93 1.44 1.47 1.22 0.6 -0.5 -1.68 -2.73 -2.77 -1.8 -0.1 0.08 0.56 0.73 0.94 1.07 -5.31 -5.24 -3.88 -3.76 -0.92 -1.8
-1.63 -0.14 -0.13 0.33 1.01 1.25 0.87 0.64 -0.82 -1.08 -1.49 -2.07 -2.49 -0.46 0.27 0.24 0.62 0.98 1.12 1.1 -3.0 -3.01 -1.65 -1.96 -0.89 -0.5
-3.01 -1.14 -0.94 0.38 0.92 1.42 1.54 1.38 0.41 -0.38 -1.47 -2.03 -2.53 -0.83 -0.68 0.52 0.44 0.36 0.54 0.64 -5.66 -2.81 -1.83 -2.84 0.2 -0.64
-1.55 -0.43 -0.07 0.27 1.14 1.25 0.79 0.42 -0.81 -0.43 -0.81 -0.89 -1.3 -0.27 -0.17 -0.24 0.57 0.88 0.81 0.99 -5.63 -1.75 -1.28 -0.95 -0.73 -0.31
-1.16 -0.08 0.09 0.55 0.99 0.83 0.75 0.58 -1.27 -0.82 -1.31 -1.88 -1.63 -1.01 0.21 0.59 0.65 1.23 0.82 1.05 -4.39 -4.14 -3.12 -1.68 -0.18 -0.24
-1.42 0.09 0.02 0.34 1.02 1.19 0.5 0.41 -1.29 -0.9 -1.72 -2.12 -1.8 -1.02 0.48 0.52 0.64 0.98 1.26 1.22 -4.69 -4.23 -3.64 -1.54 -0.62 -0.5
-2.89 -0.3 0.05 0.27 1.42 1.93 1.36 1.19 -0.1 -0.94 -1.96 -3.24 -4.5 -1.9 -0.29 -0.09 0.57 0.37 0.73 1.06 -8.7 -5.08 -2.41 -2.86 -1.4 -1.58
-1.1 -0.66 0.05 0.39 0.93 1.31 1.47 1.09 0.45 -0.58 -1.03 -1.39 -1.2 -0.98 -0.81 -0.12 -0.07 -0.24 0.21 0.37 -2.69 -1.46 -0.32 -0.81 0.32 -0.86
-1.51 0.16 0.33 0.24 0.86 1.74 1.49 1.39 0.12 -0.41 -1.04 -1.84 -3.1 -1.07 -0.46 -0.16 0.16 0.16 0.46 0.63 -2.93 -4.02 -3.49 -2.5 -0.6 -1.19
-3.66 -0.97 -0.63 -0.19 0.73 1.16 0.88 0.54 -0.34 -1.08 -1.56 -1.7 -4.21 -0.2 0.36 0.58 0.72 0.97 0.95 0.74 -2.99 0.12 -1.0 -1.5 0.03 -0.34
-1.24 -0.18 -0.7 0.35 1.07 1.54 1.04 0.77 -0.73 -0.91 -1.39 -2.02 -2.31 -1.26 -0.31 -0.55 0.34 0.92 0.85 0.87 -3.28 -2.35 -0.66 -1.01 -0.1 0.03
-1.51 -0.35 -0.27 0.36 0.91 1.53 1.03 0.97 -0.51 -0.68 -1.73 -2.49 -2.48 -0.37 0.13 0.32 0.37 0.62 1.08 0.85 -3.75 -2.2 -1.75 -3.49 -0.28 -0.68
-1.11 -0.08 -0.2 0.44 1.27 1.59 1.22 0.92 -0.45 -0.71 -0.91 -1.73 -1.54 -0.95 -0.27 -0.11 0.05 0.85 0.67 0.56 -5.38 -2.58 -2.97 -1.5 -0.43 -0.75
-2.26 -0.04 -0.02 0.29 1.02 1.41 1.05 0.73 -0.6 -1.18 -2.04 -2.64 -2.76 -1.01 0.18 0.7 0.76 1.06 0.97 1.03 -6.09 -3.2 -4.03 -2.62 -0.77 -0.84
-3.08 -0.68 -0.23 0.35 1.06 1.39 1.43 1.09 -0.14 -0.77 -1.57 -2.67 -4.2 -1.28 -0.57 0.18 0.76 0.99 0.87 0.78 -6.23 -1.58 -2.2 -3.75 -0.07 -0.92
-1.99 0.21 -0.08 0.28 1.43 1.39 1.06 0.66 -0.58 -0.36 -1.25 -2.3 -3.22 -2.27 -0.47 -1.57 0.31 0.89 0.89 1.24 -4.77 -1.71 -3.1 -1.54 0.26 -0.52
-0.86 0.31 0.2 0.07 0.69 1.07 0.89 0.91 -0.42 -0.34 -0.51 -1.44 -1.4 -0.9 -0.25 -0.33 -0.06 0.98 0.88 0.92 -1.8 -1.0 -1.12 -1.01 -0.86 -1.14
-1.52 -0.04 -0.13 0.47 0.62 1.27 0.92 0.94 -0.77 -1.22 -1.38 -2.18 -2.73 -0.75 0.22 0.18 0.45 1.01 1.13 0.91 -3.63 -2.79 -1.17 -0.61 -0.72 -0.81

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.