Heatmap: Cluster_110 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
AT1G08100 (ACH2)
-2.49 - - -2.24 - - 0.89 - - - - - - -2.9 - - - - - - - - - - - -3.78 - - -3.55 - -4.58 5.5 - - - - - -4.49 - - - - - - -1.94 - - -
1.36 0.37 -2.46 -1.1 -1.37 -2.95 -2.06 - -7.13 -6.14 -4.84 - -2.85 -1.63 -0.27 -0.86 -1.79 -2.56 -2.14 0.03 -1.12 -0.42 -0.37 -1.25 1.52 -1.12 -2.34 1.0 -0.7 1.84 -1.18 2.81 0.24 1.89 -0.34 -2.59 2.45 -0.04 0.77 0.66 - -0.02 -0.49 0.43 -1.5 - - -0.72
AT1G12940 (NRT2.5)
- -3.8 2.57 2.2 2.35 -0.49 2.16 - - - -5.91 -6.76 -6.72 -5.45 - - - - -2.46 -2.98 - - -5.8 -3.43 0.8 -2.8 -1.5 -3.72 -0.28 3.09 -5.97 -0.39 -2.99 -1.78 -6.34 - 2.63 2.49 -0.46 -2.02 -3.79 -0.78 -1.61 - -4.14 - - -
AT1G18970 (GLP4)
- - - -4.07 -3.52 -4.44 - -4.57 - -5.64 - - - - - - - - - - - -4.01 - -5.94 -2.88 -6.15 0.75 - -5.4 - - -0.71 -0.87 3.3 -1.36 -3.05 -2.54 -1.57 -2.59 - - 3.98 -2.38 - 4.14 - - -
- -4.03 - -4.08 - - -4.53 - - - - - - 2.43 0.23 -5.18 0.64 0.94 -1.59 -2.36 - -0.79 -3.14 2.28 -3.57 2.81 - -4.05 -2.53 -3.15 0.69 -5.86 -2.15 -2.04 -0.18 0.09 3.75 2.71 -7.95 - - -2.17 - - - - - -
- - - - - - - - - - - - - -5.02 - -1.77 - - - -6.78 - - - -7.81 0.15 - 1.55 - - -0.07 -2.17 0.74 -1.19 2.49 - - 1.89 1.45 4.47 - - 2.28 -3.24 - 0.25 - - -
- - - -0.06 - - - - - - - - - - - -2.17 - - - - - - - - - - -1.03 -0.03 - - - 2.21 -0.47 -0.01 - - - -4.82 -4.76 - - 3.31 - - 4.85 - - -2.16
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.02 1.54 - - - - - - - - - - 4.85 - - -
- - - - 0.95 - - - - - - - - - - - - - - - - - - -1.0 - - - - 0.74 - - - - -0.01 -0.81 - 0.87 -0.47 0.1 3.08 - 4.63 1.13 1.72 - - - -
- 0.87 - - - - 0.59 - - - 2.09 - - -1.48 - - - - - 0.34 - - - -1.43 - -1.58 - - - - -0.81 - - -1.52 - - - -1.93 - - - 3.13 0.64 - 4.73 - - -
-0.81 -0.04 0.83 2.16 0.92 0.22 2.79 -4.03 -3.54 -4.06 -2.91 -3.67 - -0.32 -0.8 -3.77 - -3.51 -3.06 -1.17 3.51 -2.99 -2.56 -0.61 -5.45 -1.66 -5.32 1.65 -0.1 -5.96 -0.36 -0.03 -1.82 -0.73 -4.49 -3.16 0.33 0.2 -1.73 -3.99 - 0.98 -2.31 0.94 -0.14 - - -1.5
-0.43 0.83 0.52 -0.1 -0.02 -3.09 -0.0 - -6.53 -9.21 -7.91 - - 0.72 -0.35 0.56 -2.49 -2.6 -2.13 0.04 -0.59 1.28 0.75 -0.53 -3.35 0.25 -1.52 0.59 -0.39 -2.8 -1.19 0.51 0.67 0.61 -0.93 -0.01 1.12 0.49 -0.33 0.32 -7.44 2.27 0.16 0.49 1.56 1.54 - -0.66
AT1G74080 (MYB122)
- - - - - - - - - - - - - -6.78 -3.99 -6.3 - - -6.61 -7.76 - - - -10.57 -5.32 - -3.06 - -4.28 - - -0.87 -1.4 2.27 - - -0.69 -0.75 -0.39 - - 4.99 2.16 -3.39 1.82 - - -3.78
AT1G74190 (RLP15)
-0.08 0.92 2.8 2.23 2.73 1.56 2.04 -2.26 -1.35 - -1.8 -2.48 -1.2 -0.13 0.06 -2.08 -3.08 -1.88 -1.92 -0.3 -1.62 -2.18 -1.38 1.04 -3.42 -0.71 -2.0 -0.88 0.34 -1.78 0.15 -2.52 -2.73 -1.22 -1.45 -1.42 - -0.87 -1.07 -0.65 - -0.01 -0.11 0.25 -0.33 - - -1.27
- -4.15 4.76 -3.16 4.12 1.07 -1.6 -4.81 - -2.83 -3.86 - - - - -5.54 - - -2.28 -6.99 - - - -6.66 - - - - -5.75 - - - - -5.24 - - - -3.51 -7.59 - - - - - -2.0 - - -5.3
1.01 -2.41 2.09 - 0.82 - - - - - - - - - - - - - - - - - 1.27 -1.08 - - 2.75 - 3.2 -0.49 - -0.36 -1.12 2.1 -2.39 - 1.12 -1.85 - - - 3.29 - - - - - 1.22
-3.57 -1.74 - - - - - - - -4.01 - - -1.98 -3.17 -0.22 - 3.98 1.18 -0.92 -1.78 - - - -2.96 - -4.41 -2.41 - -0.97 - -4.73 0.56 0.58 1.43 3.52 - - 2.84 -3.13 - - -0.29 - - -2.2 - - 0.06
0.56 -5.85 - - -0.49 - - - - - -1.98 - - -3.61 - -0.72 -1.97 - - -2.45 -1.02 - - -5.81 - - - - -3.27 -2.16 -4.5 0.43 2.7 2.28 3.29 - - 4.29 -2.75 - - 0.11 - - -1.8 - - -
AT2G30750 (CYP71A12)
-6.14 -6.63 - - - - - - - -8.43 - - - 3.03 - -0.3 -6.86 - -8.37 -5.75 - - - -2.78 -3.19 -4.95 1.3 - 0.47 -5.81 -1.42 -2.77 -1.42 2.62 -2.85 -3.47 2.66 1.4 2.54 -0.09 -1.76 2.95 1.43 -2.42 -0.21 - - -4.56
- -1.94 -2.01 - -1.63 - - -1.47 - -3.19 - -1.96 0.15 -4.57 0.53 - - 2.0 -3.3 -0.31 - - - -2.62 - -2.31 - 2.9 -1.38 - -2.65 0.21 - 0.8 -2.91 - - -2.02 -6.32 - - - 0.7 3.26 3.17 2.35 - 0.98
AT3G05690 (UNE8)
-2.51 -0.27 - -7.77 -4.78 -4.67 - - -8.13 -9.28 -6.81 - - 0.8 -2.05 -2.89 -6.84 -3.99 -5.28 -0.48 -6.45 -0.35 1.23 -0.91 -2.84 -1.3 1.46 3.19 -2.64 -4.88 -0.41 1.68 -0.1 0.4 -0.69 -0.55 2.99 2.32 0.38 -3.4 -4.41 1.76 0.2 -1.5 -0.92 - - -1.57
AT3G14225 (GLIP4)
1.54 -4.49 2.08 1.39 1.47 -2.22 0.97 - - -4.95 - - - 2.66 - -6.57 -3.69 - -2.85 -4.11 - - - -3.97 -4.23 -6.64 - -2.85 -4.85 - -5.72 -1.13 -3.21 0.84 -5.85 - -3.94 -4.55 -3.84 - - 4.0 2.57 -3.88 0.63 - - -3.16
AT3G24290 (AMT1;5)
- - - - - - - - - - - - -0.4 - - - - - - - - - - - - - - -0.43 3.85 -2.35 - 4.75 -2.39 -2.54 -4.23 - - -4.01 - - - 1.45 -0.49 - -0.46 - - -1.68
- -3.59 - -3.0 - -3.37 -3.35 -2.52 - - - - - - -1.92 - - - - - - - - -6.92 - - - -2.87 -2.79 - -5.4 1.08 -2.13 -2.84 - - - -6.46 -5.17 - - 5.12 -1.32 - 3.21 - - -
- - 5.54 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.59 - - - - - - - - - - - - - - - -
-3.18 2.32 -2.35 -0.48 -0.98 -0.85 -0.27 -2.69 -1.26 -2.3 -0.66 -2.21 0.11 0.55 0.92 -1.66 -2.35 - -2.86 0.49 -2.28 1.37 1.46 -0.47 -2.56 -0.08 -0.09 0.29 -0.05 -0.14 -0.43 -1.11 -1.99 -1.11 -0.73 0.66 3.24 0.95 0.31 - - 0.85 - -0.48 -2.06 - - 0.07
2.79 -1.11 2.84 1.3 1.73 -0.03 1.57 - -0.94 - -3.02 -4.01 0.54 -4.33 - - - - -0.91 -1.82 - -1.16 1.1 -4.39 - -5.44 - -3.33 -0.58 -5.22 -2.88 -1.66 -4.54 -1.5 -2.84 2.49 - 0.4 -3.04 - - 1.87 -2.37 -1.77 2.29 - - -2.24
-0.26 - -0.05 1.64 1.53 0.63 2.62 - - -2.91 - - - - - - - - - - - - - - - - - - - - - -1.21 -1.82 1.14 - - - -6.0 - - - 2.01 - - 4.67 - - -
0.76 - -1.79 -2.62 - - -1.55 - -2.96 - - - -2.12 - - - - - - - - - - - - - - - -3.87 - - -2.68 -2.91 1.77 - - - - - - - 4.79 -1.53 - 3.75 - - -
- - - 2.92 - - 3.61 - - - 0.82 - - - - - - - -0.7 - - - - - - -1.22 - - 1.01 - - -0.81 -1.5 -1.13 -2.8 - - -1.99 -1.9 - - - - - 4.42 - - -
AT4G11480 (CRK32)
- -5.83 - 0.42 0.37 - 0.26 - -2.92 -1.61 -1.64 - 3.85 2.16 - - - - -4.21 - - - - -7.1 - - -2.72 - -0.7 - -2.44 - -1.67 0.08 - -1.0 0.79 1.61 0.36 - 2.79 2.99 -2.5 - -0.92 - - -
- -4.28 - 2.87 1.77 2.97 4.36 - - - -0.01 - 2.29 - - - - - -0.64 -3.23 - - - -2.22 - - - - -2.32 -2.72 - - - - - - - -5.11 - - - 0.06 - - -0.86 - - -
2.97 -2.35 3.45 - 4.05 1.2 - -1.58 - -4.08 - - -1.0 -4.77 -1.67 - - - -0.73 -2.4 - - -1.76 -5.93 -0.05 - - - -1.5 1.07 -2.93 -2.46 -1.57 0.23 -0.42 -2.73 - 0.16 - - - - -1.06 - - - - -
AT4G31970 (CYP82C2)
- - - - - - - - - -1.54 - 2.77 0.35 - - - - - -1.92 -5.92 - - - -6.82 - - 2.88 - - -1.65 - 0.32 - 1.35 - - - -0.62 4.66 0.88 - - - - -25.27 - - -
-8.99 -1.98 -4.23 - -4.99 - - - - - - -5.76 - -2.82 0.42 -2.75 -4.98 - -3.91 0.54 3.95 -2.8 - -4.78 -4.17 -5.01 -4.78 -3.79 0.65 -5.69 -4.76 2.65 1.87 -2.06 2.4 - -1.71 0.71 -1.98 - - -2.9 -3.83 - 3.15 -2.48 - -3.99
-1.87 0.56 -2.64 -1.34 -1.31 -2.37 -1.49 -7.21 -4.78 -8.76 -6.32 -9.07 -6.98 0.86 0.58 1.06 -2.48 -2.16 -1.36 -0.05 -1.36 0.23 -0.33 -0.57 -3.97 0.47 0.16 -0.61 -4.45 -5.28 -2.02 0.76 1.24 0.96 0.04 -0.52 2.45 0.62 1.55 -2.08 -7.85 2.08 1.24 0.08 1.56 - 0.35 0.29
AT5G06510 (NF-YA10)
-6.17 -0.12 - -3.78 -2.65 -4.15 -3.63 - - - - - -4.49 1.23 -2.4 -0.78 - -5.18 -4.08 -0.05 -1.5 0.4 0.94 -0.26 - -0.75 -1.66 -1.43 - -7.59 -3.45 1.0 -0.64 -1.66 -1.17 0.64 3.13 2.17 0.24 - - 0.49 0.42 -2.31 -1.79 3.79 - -1.96
-0.68 -2.95 -4.62 -5.2 -2.57 -3.77 -5.66 - - -6.63 - - -0.92 -2.51 - -4.87 -4.37 -0.48 -1.49 -4.19 -3.06 -1.61 -2.92 0.77 -4.7 -0.23 -0.88 - -5.04 - -6.74 -0.97 -0.23 0.87 -4.61 1.7 0.18 -0.22 1.11 - 0.18 2.87 3.89 -2.62 2.39 -2.87 - 0.84
-1.41 -2.17 3.24 1.02 2.11 -1.29 1.26 - -3.29 -6.59 -3.74 - -4.95 -4.65 - -4.65 - - -1.69 -2.84 - -1.61 0.6 -2.54 -5.51 -3.63 - 0.85 -1.07 -3.87 -4.06 -3.91 -2.84 1.66 0.5 -2.24 0.59 -0.14 0.96 -0.17 - 1.14 0.78 3.06 -0.07 - -8.52 -
- 0.51 -0.85 0.2 - 0.15 2.06 - - - - - - - - -2.61 - - - -1.76 -1.5 - - -0.75 - -2.46 -1.25 4.53 -0.14 - 0.4 -2.57 -1.78 -3.44 -1.53 - -1.54 1.83 -2.19 2.66 - - - -0.7 - - - -1.51
3.51 -6.97 2.22 - 2.22 -0.51 - -3.9 - -5.57 - -5.64 4.33 -6.36 - -5.81 - - -2.07 -8.12 - - - -7.03 - -5.75 - - -1.59 -7.98 -5.17 -1.99 -3.45 -2.09 -3.93 -5.22 -4.25 -5.25 0.36 1.19 - -0.1 -5.15 -5.56 -1.1 - - -
- -0.78 - - - -0.02 - 0.84 -0.0 0.47 - - 3.81 - - - - - - - - - - - - - - - -0.98 - -2.08 -1.33 - 0.02 - - - - - - - - - - 4.7 - - -
- 1.79 - - - - - - - - - - 5.37 - - - - - - - - - - - - - - - - - - - - - - - - 1.61 - - - - - - - - - -
- - - - - - - - - - - - - -3.21 -0.42 - - - 0.32 -4.25 - - - -3.24 -0.17 - 4.04 - -0.17 -3.34 - 2.48 -0.17 2.65 1.28 - 0.56 -2.45 -0.41 - - 2.51 -0.4 - 1.77 - - -
- - - - - - - - - - - - - -0.34 - - - - - - - - - -4.1 - - - - - - - - 0.0 -0.64 -0.11 - - 1.92 2.44 - - 4.41 - - 3.82 - - -
- - - - - - - -10.53 - - - - - -1.17 - - - - - - - - - -2.17 - -3.5 - - 1.23 - -3.46 1.97 -0.14 2.89 -14.92 - 4.12 0.1 3.56 - - - - - 1.24 - - -
- - - - - - - -2.52 - - - - - -0.18 - -2.42 - - - -5.13 - - - 1.67 - 2.06 0.05 - 3.02 -3.79 -3.79 - 0.66 2.14 -3.21 0.19 3.28 2.38 -1.62 - - - - - 2.93 - - -
- -8.2 - - - - - -6.14 -5.35 - - - - -6.11 - - - - -6.57 -5.92 - - - 1.34 - 2.67 - -4.32 -0.79 -7.4 - -3.32 -0.82 5.14 -5.35 -3.69 - -1.62 -2.3 - - - - - 0.76 - - -
- -4.82 - - - - - -4.39 - -5.0 - - - -4.36 - - - - - -4.43 - - - 1.19 - 3.19 - -2.57 -4.89 -5.66 - -1.58 -5.12 5.08 -3.61 -1.95 - -1.18 -0.92 - - - - - -0.41 - - -
- -1.43 -0.34 - -6.94 -7.19 -3.14 - - - - - - -1.11 - -2.0 -0.06 -1.44 -2.92 -4.66 - - -0.65 -6.49 - -2.98 - -3.46 -4.65 - -1.85 -0.22 -3.39 -0.3 -0.58 -0.97 - -1.48 -4.84 - - 4.66 2.91 - 2.58 - - 0.24
- -0.92 3.98 0.06 -0.42 2.92 1.62 - -0.3 - - - - - - - - - - - - - 0.89 - - - - -0.07 0.2 - -2.54 1.46 -2.34 -2.16 -0.92 - 0.18 -2.5 - - - 3.05 - - 0.05 - - -
- - - - - - - - - 0.35 - - - 2.26 - - - - - -1.99 - - - - - - 1.81 - - - - - - - 4.25 - 1.8 0.97 -1.09 - - 2.69 - - 2.77 - - -
AT5G40010 (AATP1)
-3.24 -3.79 -0.91 -3.37 2.0 2.74 -2.98 2.7 - -2.65 - - -2.81 -3.86 -0.57 -1.84 -6.75 -1.18 -1.37 -5.9 -6.67 -6.98 -6.57 -2.08 -6.95 -0.71 -4.1 - 4.2 - -5.09 1.49 -2.74 0.3 -8.83 -3.38 -2.18 0.31 -0.75 - - 0.58 -4.16 - -1.1 - -11.41 -5.27
AT5G40990 (GLIP1)
- - - - -1.65 - - - - - - - -1.26 -0.18 - - - - -3.18 - - - - -2.21 - - - - 0.44 -3.42 - 0.69 0.46 2.52 - -0.55 3.33 3.48 3.21 - - 2.25 - - - - - -
- -2.93 -1.49 -2.02 0.16 1.84 -1.38 - -2.39 - - - - -0.79 - - - - -3.64 - - - - -2.49 - -2.13 - - -0.45 - - 1.77 - -3.25 -3.64 0.57 4.24 2.81 0.92 - - - -1.93 - 2.83 - - -
AT5G44510 (TAO1)
-1.52 1.72 -0.68 -0.65 -0.81 -1.13 -0.27 -3.73 -4.15 -5.21 -5.48 -3.1 -6.1 1.15 1.06 0.53 -0.41 -0.62 -1.87 0.68 2.14 1.06 0.81 -0.08 -1.95 0.34 -0.68 0.41 -1.8 -2.06 -0.12 -0.27 0.86 0.32 -1.05 0.77 0.37 0.74 0.81 -0.96 -2.62 1.37 0.63 -1.06 0.06 - - -0.56
2.42 -0.16 - - - - - - - - - - - - - - - - 1.99 0.41 - - - - - - - - 0.85 - - 2.57 - - -0.93 - - - - - - 4.82 - - - - - -
1.39 -3.92 -3.9 - -3.94 -1.07 - 2.75 - -0.75 - - 4.89 -4.37 -1.29 -2.23 - -5.38 -0.41 -2.89 0.01 -1.89 -2.44 -3.57 -5.33 -4.98 -6.19 -2.62 -3.82 -7.81 -5.38 -3.23 -2.68 -1.9 -3.02 -5.06 -3.3 -2.37 -3.36 - - 1.59 - - -2.17 - - -
- -3.55 - - - - - - - - - - - -0.91 - - - - - - - - - -1.93 -1.01 - 1.21 - 1.08 - - 4.72 1.35 1.33 - - - -0.39 -5.07 - - - 2.62 - 1.96 - - -
AT5G60770 (NRT2.4)
- - -2.81 - -3.57 - -3.43 - - - - - -0.27 - - - - - -2.73 -7.15 - - - -8.99 - - - - - - - 5.24 -2.4 -4.63 - - -3.36 -5.35 - - - -0.89 -0.08 -2.8 2.59 - - -0.37

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.