Heatmap: Cluster_911 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovary
Ovule
Microspore
Bicellular microspore
Pollen (mature)
Pollen tube
Sperm cell
Pollen tube
Tassels (primordia)
Tassels (anther)
Tassels
Silk
Ear
Ear (immature)
Ear (inflorescence)
Ear (primordia)
Zygote (12 HAP)
Zygote (24 HAP)
Daughter cell (apical)
Daughter cell (basal)
Embryo
Nucellus
Endopserm
Kernel
Kernel (germinating)
Seeds
Embryo Sac
Pericarp and aleurone
Coleoptile (5 day)
Seedling
Internode
Sheath
Shoot (apex)
Shoot
Whole plant
Vegetative Meristem & Surrounding Tissue
Meristem (SAM with Laser capture)
Apical meristem
Stem and meristem
Stems
Stem (Internode)
Leaf
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (seedlings)
Leaf and kernel
Ear (leaf)
Root
Root (elongation zone)
Root (meristematic zone)
Root (stele)
whole crown root (20-30 mm)
Secondary root
Root, root hairs removed
Root (maturation zone)
Zm00001e021580_P002 (Zm00001e021580)
-3.04 -1.37 -1.85 -4.78 - -3.7 - -3.13 - -3.07 1.02 0.08 -1.85 -0.32 -1.64 -2.36 -2.01 -2.93 -2.32 -4.37 -6.92 -0.85 0.28 -3.97 -1.28 -1.14 -0.99 -6.25 -1.62 1.52 2.06 -0.05 0.14 -1.57 1.84 3.17 -3.5 -6.0 -5.43 -2.56 -0.46 0.55 2.19 -1.68 2.04 1.73 1.8 1.63 0.41 -1.78 -4.37 -3.61 -2.69 -1.86 -3.73 -2.23 -6.8
Zm00001e039980_P001 (Zm00001e039980)
-2.71 -6.1 -1.02 -2.32 - -1.31 - -4.94 - -5.84 -0.74 0.36 -1.3 -1.14 -1.18 -1.17 -2.9 -0.39 -2.79 -3.63 - -0.45 -3.03 -1.39 -0.8 0.2 -1.12 -0.09 0.06 -2.11 2.04 -0.91 1.89 -1.82 1.64 2.11 -0.93 -0.23 -1.84 -3.49 -1.7 -2.41 1.79 -1.62 2.34 1.95 1.34 1.57 2.37 -0.82 -2.07 -1.9 -1.42 -2.73 -3.14 -2.2 -3.2

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.