Heatmap: Cluster_108 (HCCA cluster)

View as: (view zlog-transformed or row-normalized)

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(Showing raw values)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
31.98 31.47 24.52 27.88 14.16 15.05 19.07 21.77 15.86 7.36 9.66 9.95 24.95 16.9 16.22 14.51 15.52 16.12 13.7 12.65 1.05 1.64 1.94 10.26 18.74 14.47
104.61 121.7 98.67 98.27 94.44 91.41 107.01 94.37 45.32 34.09 29.97 32.69 109.48 63.06 63.49 78.98 103.24 99.94 67.49 59.07 2.0 8.08 14.63 14.47 200.8 53.86
9.94 4.44 4.31 3.91 2.89 2.99 6.19 5.48 3.02 3.67 3.17 3.27 7.71 4.52 3.35 4.05 2.82 5.0 3.29 3.8 0.3 1.09 0.91 2.52 5.01 5.16
12.24 12.63 13.16 14.83 14.23 12.8 12.61 12.03 12.17 10.4 11.74 10.6 7.75 5.59 7.57 6.71 9.23 10.73 11.58 12.05 0.2 8.11 9.14 11.45 7.95 9.67
71.56 52.58 39.75 44.99 43.21 45.96 48.89 45.53 37.36 28.25 33.77 33.04 56.61 33.66 34.05 29.86 36.91 48.64 49.34 36.12 2.92 22.84 24.56 26.58 53.88 46.27
19.89 14.94 14.02 11.07 10.3 8.71 13.2 13.89 11.07 11.63 11.72 12.95 23.01 16.29 14.23 17.28 11.81 16.99 14.96 10.26 0.66 1.21 5.03 5.39 18.53 11.37
12.62 8.57 7.21 6.48 6.59 5.7 5.94 6.56 6.97 6.72 5.14 4.83 10.7 5.02 6.88 4.81 5.33 8.18 6.69 5.45 0.69 1.03 5.16 5.69 11.89 6.96
62.79 48.02 51.52 50.37 40.78 29.08 43.66 45.51 34.07 35.68 34.95 35.76 59.3 36.15 40.41 46.82 42.31 52.22 41.99 37.28 7.81 22.3 23.47 21.59 44.29 36.76
6.33 7.65 6.57 6.95 5.37 4.6 4.28 4.7 3.31 3.87 4.38 4.41 7.52 4.67 3.56 4.13 3.73 4.37 4.18 3.96 0.18 2.18 2.79 2.29 4.57 4.75
50.23 53.26 52.25 46.06 48.03 37.78 40.41 40.99 52.15 58.92 58.55 55.86 50.54 36.19 24.98 22.98 28.19 29.31 30.33 41.96 0.9 32.86 2.73 14.91 18.71 21.87
81.82 78.98 66.25 62.17 55.6 64.18 63.19 59.26 31.96 31.42 34.27 36.89 80.61 49.23 43.74 50.03 62.77 49.28 53.24 41.78 12.14 12.24 20.99 21.8 71.34 45.35
24.63 23.84 24.18 24.65 19.21 16.03 20.75 21.6 23.71 28.46 30.82 33.23 25.81 26.46 19.89 23.18 22.96 25.43 24.87 26.24 6.05 13.2 33.37 35.62 25.85 30.4
24.28 18.12 18.2 21.01 19.66 14.03 10.67 11.52 5.34 7.74 10.89 14.78 32.1 14.89 8.3 11.03 11.93 8.9 8.72 6.76 1.52 4.45 1.08 4.04 14.09 11.72
31.42 19.63 19.56 16.9 12.42 11.58 15.92 15.73 8.83 7.61 8.0 8.31 30.58 15.56 17.94 14.62 11.66 20.35 17.94 14.51 0.25 0.81 3.43 4.56 21.38 18.99
53.79 52.73 43.54 36.79 32.34 37.01 28.95 32.19 21.17 14.6 17.47 21.65 47.21 25.07 33.8 28.73 26.69 33.38 34.3 24.64 2.05 6.54 11.69 10.58 40.6 30.79
26.29 26.03 33.25 46.86 48.88 43.38 34.78 31.0 31.46 40.33 47.67 47.64 28.17 8.95 11.88 10.8 25.43 21.14 20.53 32.32 6.36 23.85 17.56 46.69 15.38 18.16
71.29 68.06 68.43 71.9 68.27 57.08 61.75 60.81 64.59 71.3 86.96 96.83 57.38 44.82 33.53 36.21 49.56 55.59 45.29 59.64 7.11 42.77 23.66 63.23 54.68 71.37
485.55 349.69 276.81 172.35 84.8 71.58 161.19 225.33 104.06 113.08 120.72 139.13 390.9 322.1 97.0 241.24 135.01 157.44 117.07 151.64 27.83 79.38 111.94 90.75 377.49 250.72
38.25 41.67 40.15 38.89 35.83 27.84 28.6 29.94 23.42 29.96 28.8 30.33 32.84 17.33 17.67 14.76 25.15 27.69 25.17 24.35 0.85 17.18 7.45 25.11 31.87 33.2
8.54 8.34 10.75 10.08 9.65 9.66 11.0 11.53 10.61 9.24 9.87 11.8 8.88 6.72 7.12 8.17 4.82 7.43 6.53 5.59 0.98 1.7 6.79 5.06 10.02 7.43
23.65 16.63 14.91 13.67 11.38 9.45 19.6 20.38 14.21 15.23 14.81 13.31 25.95 16.92 12.9 17.58 15.22 15.48 14.82 14.77 0.51 7.72 5.9 10.95 18.82 12.18
98.86 47.01 31.67 24.06 21.45 23.46 46.44 54.97 8.65 10.53 12.81 23.63 128.2 50.7 41.75 36.08 19.02 39.91 41.0 26.09 3.31 7.73 11.66 4.0 73.9 41.21
292.67 328.86 322.77 351.95 324.62 278.49 256.49 311.21 286.82 244.72 269.91 271.3 336.1 166.6 165.28 174.98 166.16 267.7 214.1 227.89 64.11 194.38 208.38 226.78 372.11 337.06
38.68 29.37 31.84 31.41 32.43 26.77 27.77 23.13 16.64 13.77 13.51 16.28 34.99 20.37 21.96 21.83 19.33 25.26 27.49 21.45 2.38 11.25 13.02 19.31 27.02 37.24
243.29 160.07 150.66 146.03 152.65 134.99 154.75 138.48 87.28 77.55 90.87 116.0 274.54 128.49 133.59 143.93 138.13 158.17 119.1 101.33 24.84 56.07 48.92 57.58 142.34 109.18
16.43 12.86 13.67 15.37 14.56 12.22 11.2 12.79 8.77 9.24 9.56 9.44 17.34 10.47 9.54 10.18 8.74 9.77 11.83 10.0 0.91 6.76 6.3 6.2 13.49 13.26
24.63 18.76 17.38 14.53 15.89 15.31 19.77 17.91 18.51 17.46 15.58 16.59 23.07 12.25 16.61 10.29 19.49 24.16 20.95 22.25 1.52 11.18 6.28 11.41 16.02 16.03
12.4 12.27 12.95 15.38 10.6 7.12 9.78 13.24 13.07 9.94 10.92 9.43 10.39 4.87 5.98 3.97 7.43 8.42 9.37 9.98 0.8 8.84 8.25 6.48 14.49 11.87
35.91 26.95 18.68 17.01 14.26 13.59 18.6 20.17 14.37 11.86 11.36 12.78 31.98 15.16 12.34 11.28 9.58 15.52 21.57 12.72 1.94 6.91 12.31 14.29 19.48 21.09
18.5 13.93 10.05 9.42 6.8 4.82 10.18 9.44 6.95 5.44 5.78 5.91 12.7 8.4 6.72 5.93 6.38 9.3 10.22 6.92 1.1 3.47 4.82 7.61 13.63 11.39
10.23 11.04 12.96 12.1 7.55 3.95 6.32 8.35 4.64 6.85 7.8 7.46 9.33 7.22 4.27 6.95 7.71 6.14 5.65 6.57 0.3 2.61 2.0 3.55 10.19 9.1
18.2 18.27 18.57 17.06 9.99 6.2 8.06 10.52 6.94 8.41 12.02 12.96 15.76 9.74 6.67 11.13 11.74 11.49 12.53 11.18 0.29 2.46 2.51 4.08 11.5 15.05
0.67 1.4 1.16 0.87 0.48 0.21 0.46 0.79 0.99 1.57 1.77 1.99 0.55 0.28 0.35 0.53 0.58 0.69 0.88 1.11 0.0 0.6 0.46 0.73 0.76 0.83
11.75 5.82 4.86 5.13 5.54 4.85 8.03 8.68 8.46 8.3 8.99 7.24 8.7 5.71 3.74 6.34 3.99 6.33 5.94 6.55 2.37 1.59 5.59 5.13 6.74 7.78
4.03 1.22 1.21 0.87 1.5 0.92 1.06 0.99 0.65 0.68 1.04 1.89 4.37 1.72 0.96 1.4 1.2 1.49 1.46 1.33 0.25 0.24 0.68 0.1 2.26 1.06
199.73 253.02 262.55 355.47 282.53 199.72 234.32 225.69 208.66 200.74 201.71 167.85 185.64 87.64 251.9 97.9 70.93 147.63 165.4 222.55 59.47 218.74 121.76 62.4 355.29 312.07
47.36 35.77 37.52 36.96 35.93 35.64 39.94 39.75 43.64 43.38 43.85 44.93 44.51 30.28 31.4 34.75 27.89 33.84 28.47 34.05 6.63 13.64 22.17 26.04 38.1 37.0
3.2 4.14 3.49 3.87 3.69 1.97 2.01 2.09 3.44 4.31 5.16 6.33 2.41 2.46 2.64 3.73 3.02 3.46 3.19 2.85 0.63 0.49 5.61 5.72 2.77 3.88
128.42 131.31 98.65 93.66 82.03 72.39 94.25 74.64 85.56 126.52 117.62 114.46 99.32 35.03 22.06 45.51 69.54 45.68 42.54 76.34 3.99 48.43 12.65 40.87 53.44 64.85
395.12 187.89 169.19 159.26 158.89 174.58 209.11 205.77 88.15 86.48 104.34 133.23 487.82 234.24 196.7 257.13 223.22 178.14 145.62 135.72 11.37 108.32 35.65 49.12 291.13 153.16
62.85 29.28 24.28 22.43 17.38 17.64 30.11 30.74 17.92 17.37 17.91 20.26 59.52 37.97 21.1 33.86 14.72 28.24 20.89 18.53 6.22 4.19 23.44 11.46 50.1 27.17
1619.03 1462.36 1581.91 1611.83 1758.65 1580.74 2094.96 2005.59 2062.77 2793.6 2792.08 2498.37 1917.54 962.03 1795.75 549.24 2441.1 2749.96 2065.08 2907.92 110.02 1944.32 396.19 1446.12 1619.4 1962.31
40.81 33.15 52.19 67.67 46.17 28.32 25.46 33.15 40.66 58.91 68.83 72.7 43.57 5.23 6.55 4.11 17.45 29.0 23.01 41.67 1.05 26.86 15.21 37.27 42.07 47.44
13.53 13.11 13.29 12.28 12.51 9.46 8.79 8.93 8.37 12.28 15.21 16.99 9.98 9.41 7.29 6.72 8.57 9.35 6.75 9.16 0.8 4.43 12.45 11.44 12.9 14.72
5.51 2.59 2.75 2.81 2.65 2.27 2.98 2.52 2.82 3.06 2.34 3.5 6.33 3.35 2.72 3.46 2.58 3.37 3.33 2.43 0.67 0.5 2.46 1.77 3.99 3.24
33.24 12.36 10.33 14.58 12.06 10.03 15.84 18.88 11.6 10.99 10.48 9.59 28.56 17.34 6.38 13.15 8.65 14.29 11.82 10.61 1.21 8.18 5.6 7.0 14.17 15.84
64.51 47.19 36.23 34.64 28.62 25.93 42.82 46.12 27.46 25.11 24.73 24.12 59.03 38.22 36.53 32.98 32.64 41.28 39.21 32.46 1.14 11.96 16.67 16.64 47.33 36.18
73.68 102.5 86.62 69.94 81.23 91.24 91.89 75.94 103.69 86.44 80.21 77.13 59.98 84.43 83.74 45.48 71.65 56.5 60.47 88.17 6.18 83.53 31.88 87.69 34.1 49.45
27.89 19.19 18.82 16.4 13.25 12.17 16.05 17.71 6.66 5.93 5.58 7.38 23.64 17.17 13.35 11.66 10.02 14.31 12.63 8.96 1.84 5.87 5.94 6.51 17.37 17.27
31.54 30.88 25.7 23.69 24.18 23.2 27.34 24.98 34.59 35.35 32.54 34.64 33.21 20.52 18.44 15.65 28.15 28.58 21.84 29.02 1.88 22.51 14.0 26.24 20.82 31.34
104.16 70.16 72.63 63.7 61.37 74.93 76.29 77.01 80.66 90.21 93.03 104.57 109.69 63.14 62.88 94.66 83.2 103.25 78.41 83.83 15.43 92.75 28.18 61.21 52.0 77.68
31.95 23.34 26.26 23.58 14.49 11.24 17.89 24.67 15.97 18.47 18.17 22.99 36.75 17.83 25.92 20.22 14.51 14.36 14.51 14.9 0.61 7.97 8.57 10.07 24.35 22.44
44.79 31.04 29.35 26.14 17.04 14.46 28.99 32.77 21.37 23.52 21.36 23.82 49.54 36.82 30.13 36.74 22.76 30.29 29.2 23.13 5.91 21.69 13.02 16.1 28.22 28.59
15.85 9.69 8.24 6.26 5.69 4.44 7.79 8.55 8.85 9.18 10.96 10.82 8.82 11.46 3.16 9.51 6.09 3.76 8.29 5.62 1.36 4.18 7.17 7.73 7.53 8.91
16.17 11.35 10.57 9.38 6.03 4.76 8.18 9.96 8.59 8.85 9.68 9.62 11.75 8.36 7.72 8.59 7.55 6.52 7.58 6.25 0.25 1.48 6.35 6.74 12.65 11.33
29.39 29.82 34.57 36.19 37.77 27.62 28.95 30.77 25.56 26.71 29.64 31.12 29.56 15.46 18.53 15.01 19.7 29.13 25.37 28.84 1.18 19.97 19.34 23.44 29.71 29.47

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)