Heatmap: Cluster_239 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
- -3.78 - - - - - - - - - - - 0.9 - - - - - - - - - -4.4 -0.89 - 1.53 - - - - -2.17 -2.88 -0.53 - - - - -2.6 -0.44 - 4.33 1.93 - 4.01 - - -0.55
-3.86 -1.57 - -3.23 - - - - - - - - -1.09 -1.4 - 0.6 - -3.43 -2.06 -1.93 -1.07 1.33 -0.28 -7.1 1.92 - - - -2.2 2.44 -4.38 -0.77 0.28 -1.49 -3.01 -1.37 - -1.52 -5.0 -3.05 - -0.5 -2.86 - 4.77 - - -
-0.84 -7.27 -2.6 -4.76 -6.46 -6.13 - - - - - - - -3.3 - -3.31 - - - - - - - - - -7.93 -5.98 - -5.24 - - -3.57 -4.49 2.68 -3.15 - - -2.43 -3.1 - - 4.58 1.82 -5.18 3.65 - - -5.35
- -9.3 - -6.05 -3.7 - - - - - -5.14 - - -6.63 - - - - - - - - - - - -8.12 - -4.93 -5.43 - - 0.11 -2.11 2.04 -4.1 - - -2.56 -9.65 - - 4.1 2.82 -4.37 4.13 - -11.48 -1.19
-6.9 -3.3 -0.74 0.45 -1.39 -1.9 -0.34 -5.64 -2.03 - -4.18 -3.26 - -4.39 - -5.35 - - -4.36 -4.89 -5.75 - - -5.26 -4.16 -6.49 -3.04 -3.27 -0.41 -0.84 -3.87 1.21 -1.12 -0.21 -7.61 -5.39 -3.87 -3.35 -3.3 -1.03 -2.64 4.4 3.06 -1.91 2.73 - -2.02 0.06
-6.95 - -2.9 -2.44 -3.9 - -3.07 - - - - - - - - - - - -4.21 - - - - -4.93 - -5.52 - - 1.26 -6.18 - -0.97 0.06 2.36 - - - -5.59 -6.04 - - 4.45 -2.29 - 4.01 - - -5.53
AT1G51880 (RHS6)
- - - -2.97 -4.91 - -2.65 -3.54 - -5.46 -4.87 - - -5.24 - - - - -5.81 -9.48 - - - - - - - - -7.2 - -13.96 0.63 -1.09 0.92 -8.74 - - -6.21 -7.28 - - 5.15 1.17 -4.15 2.51 - - -5.83
-3.92 -0.77 -0.84 0.12 -2.68 -2.92 -1.68 - - - -3.58 - -5.23 -0.75 -3.46 -3.55 -1.14 -2.89 -3.03 -1.15 - -1.65 -3.55 -1.48 -2.83 -0.34 1.88 -2.83 -2.3 -2.51 -2.81 -2.87 -3.51 -5.19 -3.38 -1.07 -0.52 -2.63 -3.57 2.76 2.93 0.05 0.0 - 4.16 - -8.21 -0.07
-3.92 -0.77 -0.84 0.12 -2.68 -2.92 -1.68 - - - -3.58 - -5.23 -0.75 -3.46 -3.55 -1.14 -2.89 -3.03 -1.15 - -1.65 -3.55 -1.48 -2.83 -0.34 1.88 -2.83 -2.3 -2.51 -2.81 -2.87 -3.51 -5.19 -3.38 -1.07 -0.52 -2.63 -3.57 2.76 2.93 0.05 0.0 - 4.16 - -8.21 -0.07
1.64 -0.03 - 2.1 - - - - - - - - - 0.12 - - - - 0.82 -2.62 2.93 - - - - 1.81 - - - - - - - -1.01 -2.83 - - -0.57 - - - 2.06 2.73 - 3.74 - - -
-3.92 -0.77 -0.84 0.12 -2.68 -2.92 -1.68 - - - -3.58 - -5.23 -0.75 -3.46 -3.55 -1.14 -2.89 -3.03 -1.15 - -1.65 -3.55 -1.48 -2.83 -0.34 1.88 -2.83 -2.3 -2.51 -2.81 -2.87 -3.51 -5.19 -3.38 -1.07 -0.52 -2.63 -3.57 2.76 2.93 0.05 0.0 - 4.16 - -8.21 -0.07
- -4.95 - - - - - - - - - -4.67 -0.23 - - - - - - - -4.36 -4.19 - -8.75 - - - - -3.58 -5.98 -6.68 2.02 -1.05 1.9 -7.77 - - -5.44 - - - 4.97 0.61 - 2.5 - - -5.37
- -7.69 - - - - -3.15 - - - - - - - -4.12 - - - - - - - - -4.08 - -4.95 - - 4.2 - -7.6 -2.62 0.45 3.38 - -5.18 - -1.41 -7.24 - - 2.58 - - 3.47 - - -
-5.21 -8.23 - -4.93 - -3.25 - - - - - - - -6.64 - - - - - -8.21 - - - -5.7 - - - - -4.73 - -2.6 3.81 1.26 -0.76 - - 1.71 -2.91 - - - 4.47 1.88 -4.25 0.25 - - -4.03
AT1G79320 (MC6)
1.55 -2.78 -3.79 -2.75 -2.65 - -4.35 - - - - - - 0.44 -4.32 -6.31 - - -6.25 -3.84 -4.63 - -5.32 -3.81 -2.26 -3.67 1.17 -3.69 -4.37 - -5.28 1.44 0.15 1.55 -5.75 -4.38 -2.41 -2.55 -4.2 -5.35 - 3.8 2.04 -2.39 3.85 - -9.51 -2.14
- - - - - - -2.98 -3.56 -3.39 -3.1 -0.85 - -3.72 - - - - - - - - - - -5.3 - - - - - - -4.39 0.7 -0.1 0.6 - - - -8.87 - - - 4.61 1.76 - 3.86 - - -0.91
- -0.92 - 0.98 - - 0.87 - - - - - - -0.05 - 0.23 - - - - - - - 3.14 - 3.13 1.66 2.22 2.69 - 0.04 - - - - - 1.08 -1.11 1.09 - - 1.99 - - - - - -
AT2G45890 (RHS11)
1.4 -1.05 -2.73 -1.64 -1.26 -5.41 -1.86 -6.32 -5.48 -6.38 -4.32 -5.54 - -1.71 -1.26 -0.74 -4.51 -4.4 -3.84 -2.1 -2.64 -0.58 -0.49 -1.17 -6.1 -1.13 -5.07 -4.45 -2.89 - -2.43 0.7 -0.86 0.62 -5.86 1.61 -4.81 -0.3 -4.46 - -3.04 4.14 2.87 -6.7 2.5 - -11.06 -0.67
-5.71 -4.92 -7.19 -5.68 -2.7 -1.28 -5.13 -2.37 -3.62 -5.45 -4.82 - -4.21 -3.92 -4.65 -5.55 -4.06 -5.45 -7.03 -5.74 -7.85 -3.13 -4.9 -3.81 -7.98 -3.88 - - -8.15 - -9.2 -0.31 -1.65 0.98 -4.64 -3.54 -7.89 -2.95 -6.92 - - 4.5 3.3 -3.72 3.23 - - 0.15
-7.8 -6.87 -7.9 - - - - - - - - - - -6.94 -6.2 - - -6.11 -2.74 -7.8 -4.71 - -8.79 -1.62 - -2.85 - -6.15 -2.96 -9.62 -5.38 1.04 -1.36 1.64 -6.74 -0.61 -4.08 -2.8 - - - 4.81 0.72 -4.72 3.43 - - -3.04
AT3G27070 (TOM20-1)
-3.97 -4.46 -0.01 -1.32 -1.89 -2.91 -1.49 -1.32 - -3.98 - -0.88 - -4.22 -0.98 -4.65 - - -4.2 -4.34 - - - -2.34 - -2.91 -2.63 -1.52 0.44 -2.62 -6.02 -2.0 -1.96 0.41 -2.37 2.66 -1.07 1.31 -4.83 -1.6 - 4.01 0.69 -2.96 3.6 - - -4.64
- -5.2 -3.35 - -0.96 - - - - - - -5.07 - - - - - - - - - - -2.32 -7.81 -3.71 - - -3.18 -3.64 - - 2.38 1.58 2.38 - -3.3 - -4.51 - - - 3.25 0.87 - 4.4 -0.87 - -1.54
- -2.22 - -0.03 - - - - - -2.09 - 4.27 3.1 - - - - - - -4.64 - - -0.53 - - - - - -1.94 - - 0.05 - -3.84 -5.88 - - -3.56 - - - 0.39 - - 3.84 -0.18 - -
AT3G47770 (ATH5)
-1.13 -8.49 -2.23 2.94 -2.48 -3.64 3.09 -2.68 0.81 - -1.84 - -3.13 - - - - - -6.37 -7.78 - - - - - -6.84 - - -4.51 - - 2.18 -2.23 -3.42 -8.63 - - -3.9 -7.53 - - 3.89 1.55 -1.49 2.33 - -6.79 -0.99
-1.36 -3.27 2.27 1.68 2.39 0.74 1.86 -1.61 -3.79 -3.85 -4.32 -6.46 -6.75 -7.38 -3.83 -4.75 -5.0 -5.32 -2.33 -2.87 -4.19 -5.57 -4.85 -4.51 -4.65 -4.98 -2.41 0.77 -0.67 -4.99 -3.28 -0.26 -1.69 -0.38 -2.63 -3.31 -3.96 -2.54 -3.77 0.06 -6.72 3.74 1.59 -6.23 2.34 - - -3.12
AT4G04710 (CPK22)
- -2.27 -2.74 -0.67 -1.97 -4.55 -1.23 - - - - - - -3.24 0.26 -3.77 - - -3.35 -0.48 1.83 -0.82 0.21 -1.65 - -1.47 - 1.83 -0.61 - -3.92 0.05 -0.73 1.04 -0.34 -0.94 -4.16 1.2 -2.52 - - 4.23 2.15 -3.59 1.57 - - -3.01
-1.82 - - - - -0.37 - - - - - - - 1.04 - - -2.36 - -4.69 - - - - -7.75 -4.09 - -0.96 - -1.34 - - 0.14 -1.58 -1.44 - - -1.5 -4.83 -1.93 - - 4.9 2.86 -3.15 1.75 - - -0.6
-0.94 -5.11 -1.49 -1.12 -3.24 - -1.3 - - -5.93 - -4.22 -1.36 - -4.22 - -4.43 - -4.68 -6.08 - - - -9.8 - - -5.17 -3.17 -1.33 -2.9 -4.89 0.81 -2.67 -1.37 -8.99 -3.69 -3.24 -7.33 -8.59 0.37 3.17 4.24 1.69 -4.62 1.88 2.61 - -3.37
AT4G15310 (CYP702A3)
- - - - - - - - - - - - - - - - - - - -1.31 4.45 - - - - - - - - - - -0.54 -3.44 -2.63 -5.14 - - -5.05 - - - 1.72 3.56 1.39 1.65 - - 1.93
-2.01 -5.87 -2.44 -4.57 -2.46 -3.99 -3.5 -4.1 - -1.92 - -4.98 1.24 - -3.49 - - - -4.65 -6.5 - - - - - -6.64 - - -5.9 -6.31 - 1.0 -0.59 1.24 -8.84 - - -6.83 - -3.37 - 4.35 0.1 - 4.14 - - -4.09
- -4.91 -1.42 -4.92 -0.25 -3.37 -1.78 -3.67 -4.27 -4.18 -2.38 - -0.57 -4.09 - -5.04 -5.12 - -4.03 -4.88 - -3.09 -4.94 -6.49 - -5.98 - - -3.88 - -6.3 1.66 -1.08 0.13 -1.22 -3.32 - -1.97 -6.44 - - 5.02 0.89 -4.24 2.31 - - -4.41
-5.44 -5.97 - - - - - - - -6.49 - - -4.26 - -4.08 - -3.72 2.07 2.89 - - - - - - - - - -6.53 - -6.0 0.47 -1.88 0.05 -7.49 - - -6.76 -6.98 - - 4.4 0.8 -2.47 2.83 - - 1.71
AT4G33880 (RSL2)
-7.44 -10.13 - - - - - - - - - - -3.07 - - - - - - - - - - - - -8.16 - - -5.94 - - 1.04 -1.23 -0.41 - -4.56 -2.97 -4.07 - - - 5.04 2.5 - 2.45 - - -1.91
-3.23 -7.46 -4.72 -3.96 -3.67 - -5.67 - - - - -6.3 -6.59 -6.96 -2.5 -5.45 -5.35 -0.92 -3.34 -4.02 -4.77 -4.41 -5.76 -5.77 2.01 -3.66 -3.73 - -2.8 1.63 -7.17 1.38 -0.56 0.91 -9.34 -0.54 0.97 -1.1 1.13 - - 4.38 1.24 - 2.44 - - -4.11
- -5.53 -0.71 -1.73 -1.6 -2.02 -0.73 - -5.08 - - - - -4.0 - -4.95 -4.91 -5.17 -5.33 -5.24 - -3.08 -4.64 -3.97 - -3.61 - - - - - 0.63 -1.18 1.06 -6.82 -2.12 - -4.19 - - - 4.95 -1.64 -2.45 3.27 - -5.31 -5.8
- - - -2.44 - - - - -2.54 - - - - - - - - - -4.97 - - - - -2.98 - - - -3.31 -3.77 - - 0.61 -3.82 0.42 -7.74 - - -5.26 - - - -0.43 1.03 3.51 4.44 - - 3.08
- -7.31 -4.65 -0.36 -3.74 -1.84 -0.85 - - - -4.03 -3.64 -6.23 -3.1 - -6.45 -5.73 -2.12 -2.06 -5.22 -4.22 -4.7 -12.84 -10.04 - -4.03 -5.25 - -5.84 -7.28 -7.31 2.41 -0.94 -0.05 -3.42 -2.21 - 0.24 -7.9 - - 2.88 3.06 - 4.32 - - 0.28
AT5G52260 (MYB19)
0.93 -4.72 - - - - - - - - - - - -4.84 -2.29 - - - -4.71 -7.33 - - - -8.29 - - - - - - -6.8 0.33 -1.01 1.14 -3.43 -2.77 -4.25 -5.3 - - - 4.22 1.95 - 4.25 - - -5.49
- 0.33 - 0.34 -1.21 - 0.1 - - - - - -0.45 - - - - - - -2.24 - - -0.68 -2.86 - -2.79 - - - - -0.53 -1.44 -1.57 0.63 3.93 0.84 - 0.46 - - - 4.33 - - -0.66 - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.15 - - 0.28 1.5 - 2.96 - - 0.43 - - - 4.93 - - - - - -
- -5.07 3.72 3.75 2.45 -1.07 3.27 -3.31 -1.51 - - - - - - - -1.84 - 0.13 -5.53 - - - - - -3.85 - - -3.11 - - - -5.17 -2.13 - - -1.35 -1.6 -2.28 - - - - - 1.32 - - -
- -5.17 - - - - - - - - -6.13 - - -1.1 - -7.06 - - -5.59 -7.37 - - - -5.38 -2.28 -6.52 2.03 - -2.69 - -5.03 2.22 -0.28 1.13 -4.52 - - -2.2 -4.52 - - 4.7 2.1 -2.53 1.71 - - 0.35
-3.25 -2.96 - -3.5 - - -1.45 - - - - - - -5.24 -2.42 - - - - -3.84 - - - - - - - - - -5.27 -3.65 1.43 -0.14 -1.5 - - - - - - - 5.1 2.24 - 1.99 - - -4.63
-3.01 -2.89 -3.35 -2.99 -3.44 - -1.58 -4.17 - - -5.0 - - -2.99 -4.51 -4.01 -3.55 -3.44 -4.01 -3.62 - -3.61 -2.3 -4.62 - -4.4 -4.12 -2.07 -5.97 -8.35 -4.33 1.09 -0.86 0.25 -3.11 -3.99 -3.04 -2.86 -3.14 -6.54 - 4.63 2.68 -2.45 3.19 - -10.26 -0.51
-1.74 -6.39 -4.62 -3.1 -4.51 -4.8 - -5.67 - -5.56 -3.93 -1.09 -2.81 -1.17 -4.35 -5.07 - - -7.03 -6.73 - - -5.35 -7.3 - - - -5.3 1.4 - -6.28 0.24 1.28 2.12 -5.13 - -5.3 -4.82 -2.41 - - 5.04 0.09 - 0.45 - - -5.55

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.