Heatmap: Cluster_97 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
- - - - - - - -7.37 - - - - - -8.17 - -7.06 - - - - -1.34 - -5.65 -2.52 -2.37 - - -0.69 -1.04 -0.03 -1.46 1.14 1.27 5.58 1.12 - - - - - - - - - -5.69 -8.13 - - -8.26 - - - -9.77 - - - - -
- - - - - - - -1.03 -0.73 - - - - - 1.23 - - - - - - - - - - - - - - - - - - 5.77 - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.69 - - - - - - - - - - - - - - 2.71 - - - - - - - - -
- - - -1.09 - - - -3.6 - - - - -1.75 - - - - -3.53 - - 0.03 - -2.22 -1.11 -0.71 -2.68 - 1.06 -1.79 2.06 3.05 2.71 1.58 4.31 -0.61 - - - - - - - - - - -3.26 - -0.23 -3.42 - - - -4.3 - 0.79 2.3 0.85 -2.22
-3.3 -0.53 -2.51 -3.57 - - - - - -8.99 - - -2.12 - - - -4.08 -7.16 - - -2.44 - -3.1 -2.44 -2.64 -6.97 -6.55 -1.27 -2.27 -0.66 1.2 1.47 2.32 5.19 2.77 -0.34 - -5.76 -4.81 -4.35 - -4.14 -3.77 -4.78 -3.19 - - - -4.9 -4.32 -6.16 - -7.57 -4.78 - - - -
- - - - - - - - - - - - - - - - - - - - -1.83 - -3.74 -1.71 -1.9 - - -0.43 -2.23 -0.12 0.68 2.32 2.24 5.43 -0.42 - - - - - - - - - - - - - - - - - - - -7.04 - - -
- - - -5.88 - - - - - - - - -6.46 - - - - - - - -2.21 - -4.1 -2.47 -2.14 - - -0.34 -1.06 0.07 -1.26 1.83 2.21 5.47 0.88 -4.66 - - - - - - - - - - - - -6.65 - - - - - - - - -
2.15 1.59 1.93 -5.73 - - - - - - - - 2.1 - - - -2.73 -1.8 -3.26 - -0.68 - -1.42 -1.74 -2.35 - - 0.5 -1.64 1.14 2.26 2.43 0.92 4.43 1.41 - - - - - - - - - - - - -6.54 -3.3 - - -4.11 -5.38 -4.49 - - - -
-2.22 0.12 -3.38 3.85 1.17 - - - - - - - -0.91 - - - -3.56 -5.06 - - -2.9 - -0.45 -1.07 -2.9 - -4.12 -0.43 -1.39 -0.86 3.35 2.7 0.97 3.03 1.9 -0.84 - - - - - -5.88 - - 0.05 -0.05 - -2.71 0.19 - -2.42 - -1.21 -3.41 -2.77 -0.45 - -
0.98 0.27 0.13 -4.54 - - - - - - - - 2.26 -3.62 -4.79 -3.82 - -0.05 -3.04 -4.28 - - - - - - - - - - - - - 4.91 2.32 -1.0 - - - - - -5.49 - - - 1.08 -5.8 -0.53 0.88 - - 0.27 0.65 0.27 - - - 1.72
- - - 3.52 - - - - -2.91 - - - - -1.19 - -1.59 - - - - -0.6 - -1.02 - - - - -0.15 - 2.08 4.06 3.79 -0.4 2.34 - - - - - - - - - - - 0.52 - - 0.69 - - - -5.45 - - - - -
- - - -2.52 - - - - - - - - - - - -8.8 - - - - -0.3 - -3.25 -1.84 -1.19 - - 1.24 -1.94 1.83 1.5 2.44 0.57 5.26 0.82 - - - - - - - - - - - - -6.93 - - - - -8.14 -3.95 -6.99 - - -5.27
- - - - - - - - - - - - - 0.25 - - - - - - - - - - - - - - - - - -0.33 - 5.52 3.33 - - - - - - - - - - - - - - - - - - - - - - -
1.05 1.02 -0.06 0.04 - - - - - - - - 2.44 - - -6.13 -2.6 -2.54 -3.91 - -0.39 - -0.41 -0.87 -0.34 - - 1.62 -2.76 1.82 3.96 3.5 1.21 2.41 0.76 - - - - - - -8.1 - - - - - - -4.14 - - -4.98 -3.32 - - - - -
- -10.5 -4.9 -12.0 - - -11.77 -12.77 -14.28 - - - -5.37 -1.19 -2.96 -3.54 -6.6 -6.36 - - -2.0 - -1.99 -1.97 -2.43 -11.31 -9.53 -0.86 -2.19 0.19 2.06 2.59 2.33 5.22 0.94 -9.07 - -11.11 - -11.63 -9.98 -12.82 - - - - - - -9.09 - - - -13.34 - - - - -
-1.26 0.5 -7.76 -9.0 - - - - - - - - -7.1 - - -9.26 - -6.54 -6.54 -8.79 -1.78 - -0.25 -1.42 -1.47 - - 0.86 -4.7 0.72 3.89 2.89 -0.52 4.8 - - - - - - - -11.33 - - - - - - -7.19 - - - -13.82 - - - - -
-5.38 -6.62 -5.19 -3.44 - - - - -9.72 - - - -4.67 - -7.54 - - -7.63 - -5.22 -1.1 - -3.72 -1.93 -1.43 - - -0.19 -1.97 0.29 1.27 2.1 1.82 5.41 0.68 -5.79 - - - - - -9.35 - - - - - - - - - - -8.57 - - - - -
- -4.34 - -2.88 1.63 - -3.53 -7.89 - - - - - - - - - - - - -1.03 - 0.69 -1.15 -0.39 - - 2.09 -5.58 1.85 4.58 3.58 -2.44 2.86 - -3.68 - - - - - -7.2 - - - - - - -3.65 - - - - - - - - -
-3.67 -1.78 -4.83 3.71 - -0.15 -2.53 -0.85 -1.56 -1.32 -2.82 -1.42 -2.59 -2.72 -2.07 -2.07 -0.69 -1.81 -2.09 -2.6 0.96 -0.99 0.25 0.97 1.03 -0.26 -2.58 1.23 0.85 1.11 1.48 1.16 1.39 0.93 1.94 -0.68 - -3.21 - - 0.13 -2.34 - - - 1.04 -2.68 -0.83 -2.29 -4.48 -1.02 -2.24 -2.34 -2.86 0.35 -0.24 -1.96 1.44
- - -4.64 - - - - - - - - - -1.35 -1.6 -2.05 -1.71 -5.09 -5.94 - -4.92 -1.03 - 0.29 0.98 -0.01 -1.75 -5.42 0.58 -1.35 0.59 3.04 2.58 2.0 4.52 2.77 -2.97 - - - - - -7.27 - - - - - - - - - - - - - - - -
- 0.9 - - - - - - - - - - - - - - - - - - -0.37 - -0.48 -0.98 -2.4 - - -1.28 - 1.18 3.94 2.57 1.02 4.72 0.07 - - - - - - - - - - - - - -0.71 - - - -6.51 - - - - -
-0.59 1.14 - - - - - - -3.65 - - - -1.52 - - -2.4 - - - - - - 1.13 -0.84 -1.81 - - 2.08 - 2.01 4.58 3.7 0.61 1.85 - - - - - - - - - - - - - - -0.12 - - - -1.73 - - - - -
-2.51 - -1.67 3.51 0.41 - -2.56 - - - - - 1.15 -4.53 -3.41 - -3.12 - - - -0.58 - - -2.04 -2.94 -0.28 - -0.44 -3.59 -0.82 2.58 2.52 0.7 4.36 0.52 -1.69 - - - - - -2.46 - - 0.14 - - -3.7 0.04 - - - - - -1.14 -1.47 - -
-1.79 0.99 -3.42 2.27 2.6 - 1.18 -2.89 -4.85 -6.29 - -6.09 0.93 -4.13 -3.3 -3.83 -2.53 -5.67 -2.33 -2.38 -0.54 -1.39 -2.03 -0.97 -1.21 - -2.73 1.2 -3.42 1.68 2.64 2.04 0.64 3.93 -0.04 -3.69 -2.01 -2.48 -1.97 -1.85 - -3.48 -2.83 - -1.34 - - - 0.26 -1.43 -2.66 - -4.63 - - -4.22 - -
- - - 1.36 - - - - - - - - -0.23 - - - - - - - - - - -1.1 - - - 0.6 - 2.29 1.0 0.79 - 5.46 - - - - - - - - - - - - - - - - - - - - - - - -
- 2.39 - -0.56 -2.24 - -1.23 - -5.85 - -4.72 - -1.8 - - - - - - - -2.15 - -1.03 -2.11 -1.57 - - 0.22 -0.21 -0.07 2.39 1.96 2.5 4.73 2.14 - - - - - - -5.66 - - -1.11 -3.41 - - -1.33 - - - -5.89 - - - - -
- - -0.47 -5.46 -4.48 - - - - - - - 0.85 - - - -3.21 -2.4 - - -0.92 - -1.65 -1.94 -0.98 - - 0.62 -3.05 0.78 2.1 2.3 0.01 5.25 0.7 - - - - - - -8.14 - - - - - -3.61 - - - - -8.39 - - - - -
- - - 1.53 - - - - - - - - - - - - - - - - -0.79 - -2.0 -1.67 -1.78 - - 1.96 -2.61 1.17 3.36 3.18 -1.57 4.79 - - - - - - - - - - - - - - - - - - -2.75 - - - - -
-3.46 -2.79 -5.44 -8.26 - - - - -10.91 - - - -3.94 - - -9.8 - -7.06 - -8.03 -2.81 - -1.97 -2.72 -2.75 -6.23 -7.75 -0.8 -2.68 -0.57 2.17 1.3 1.59 5.27 2.74 -2.38 - - - - - -7.22 - - -6.37 - - - -7.38 - - -8.18 -13.01 - - - - -
- - -6.64 -3.32 - - - - - - - - -6.89 - - - - - - - -1.13 - -3.53 -1.97 -1.59 - - 0.3 -1.02 0.11 -0.27 1.67 1.62 5.45 1.69 - - - - - - - - - - - - - - - - - - - - - - -
- -2.98 -3.69 4.38 -2.46 - -3.04 - - - - - -1.41 -6.02 -3.16 -4.29 1.02 -3.52 - 1.03 -0.08 -1.99 0.73 0.98 0.62 -3.3 -2.24 0.62 -2.33 1.77 1.31 2.74 1.44 1.0 -2.19 - - - - - - -6.68 - - - -0.46 - -0.45 -2.28 - - -3.15 -4.53 -2.52 -0.29 1.52 -2.07 -
- - -5.62 -6.5 - - - -8.24 - -9.0 - - -4.02 - - - - - - - -0.33 - -0.89 -1.13 -0.66 - - 1.75 -4.82 1.85 3.66 3.4 -0.02 4.59 -3.08 - - - - - - - - - - - - - -7.2 - - - - - - - - -5.0
- - -5.76 -8.5 - - - - - - - - -4.02 - - -9.08 - -10.11 - - -0.49 - -1.52 -1.33 -1.35 - - 0.85 -1.77 1.77 2.89 3.06 1.32 5.0 -1.89 - - - - - - - - - - - - - -6.61 - - - - - - - - -
-0.52 -1.6 -1.87 -2.84 - - - - -7.25 - - - -2.37 -2.2 -5.19 - -2.93 -1.63 -4.06 -4.08 -0.09 - 0.13 0.33 -0.76 - - 2.26 -5.82 2.38 4.56 2.95 0.3 1.05 -4.23 - -1.58 -1.4 -2.84 -2.72 - -1.92 -0.06 -1.8 - - - -1.95 -4.94 - -5.99 -4.79 -5.22 -0.37 1.43 -0.67 - -
- -7.19 - - - - - - -9.09 - - - -6.65 -8.66 - - - - - -8.44 -0.71 - -3.92 -1.95 -1.25 - -8.93 -0.23 -1.14 0.7 0.51 2.43 1.95 5.09 3.14 -4.18 - - - - - -10.17 - - - - - -5.0 -8.43 - - - -11.59 - -4.57 - - -4.56
- -0.05 - 4.09 1.36 - - - - - - - -1.18 - - - - - - - - - -0.68 -2.69 - - - -0.11 -1.3 0.82 3.37 2.7 0.79 3.19 2.33 - - - - - - - - - - - - - -1.36 - - - -4.08 - - - - -
0.12 1.75 -1.24 3.01 2.18 - 0.77 - - - - - -1.63 - - - - - - - -0.22 - - -0.79 0.07 - - -0.8 -1.76 0.36 3.21 3.4 2.86 1.73 - - - - - - - -3.57 - - - - - - 1.47 - -1.22 - -2.14 - - - - -
-2.76 -1.63 -1.11 -3.04 -7.18 - -6.42 -13.52 - - -12.51 -12.23 -1.6 -3.99 -3.94 -4.44 -2.21 -2.7 -1.58 -3.45 -1.21 -4.52 -2.13 -0.77 -0.82 -0.66 -4.34 -1.03 -1.62 -0.64 0.17 1.05 1.97 4.97 3.15 0.3 -5.47 -6.2 -5.4 -5.3 -4.03 -3.07 -6.69 -5.69 -1.67 -4.5 -3.35 -3.12 -5.45 -1.93 -1.72 -3.12 -4.86 -3.15 -0.04 -2.87 -5.57 -1.78
- - - 2.03 - - - - - - - - - - - - 2.02 - - - - - - - - - - - - 1.65 - -0.7 0.86 5.43 - - - - - - - - - - - - - - 0.29 - - - - - - - - -
-1.62 2.36 -2.89 -1.4 -5.75 -7.43 -7.65 -7.91 -7.21 -6.93 -6.67 -6.98 -2.33 0.32 -1.86 -1.62 -4.29 -5.05 -5.07 -3.68 0.0 -10.02 -1.2 -0.77 -0.14 -2.99 -6.93 0.66 -0.76 0.62 2.07 1.85 1.83 4.76 1.92 -0.96 - -11.08 -9.09 - -7.51 -4.97 -10.1 - -3.36 -11.95 -13.07 - -3.88 -6.57 -9.0 -10.84 -11.27 -8.69 - -11.67 -7.84 -5.74
- -7.94 - -3.31 -7.35 - - - -11.05 - - - -6.03 - - - -8.33 - - - -1.24 - -3.43 -2.24 -2.04 -8.37 - -0.36 -1.53 0.68 0.28 1.86 1.95 5.29 2.66 -6.23 - - - -6.99 - -7.47 - - - - - -7.48 -9.1 - - - -13.14 -7.1 - - - -
- - - - - - -6.16 - - - - - -9.33 - - - -7.85 - - - -0.65 - -2.45 -1.76 -1.33 - - 0.55 -2.95 1.31 1.9 2.57 0.81 5.34 -0.95 -7.49 - - - - - - - - - - - - - - - - -9.1 -7.76 - - - -
-3.47 -3.27 -1.63 -2.81 1.57 - 2.01 - - - - - 2.46 - - - -1.85 - - - 0.41 - -0.85 -1.45 -0.08 - - 2.42 -3.78 2.14 2.5 2.22 0.03 4.33 - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - -0.75 -0.41 - - 2.19 - 1.57 4.8 3.65 -0.33 2.76 - - - - - - - - - - - - - - 0.2 - - - - - - - - -
- -4.62 - -2.4 -5.25 - -5.84 -6.8 -5.71 - - - -3.68 -5.31 -6.92 - -4.62 - - - -0.59 - -0.44 -1.17 -0.75 - - 1.49 -3.13 1.47 3.48 2.77 0.2 4.91 -2.82 - - - - - - -8.84 - - - - - -6.98 - - - - - -3.42 -5.37 - - -5.73
-2.09 2.06 -1.5 -1.53 -4.02 - - - - -8.75 - - -0.79 -1.67 -2.96 -3.95 -1.58 -2.71 -3.67 -1.17 -1.29 -3.64 -0.14 -1.01 -1.13 -0.41 -6.57 0.85 -2.08 0.57 3.18 2.33 0.98 3.87 1.14 0.34 -1.46 -1.56 -1.5 -1.76 -1.31 0.04 -1.46 -1.1 1.02 -3.89 -3.18 -0.26 -3.01 -1.27 -0.98 -1.91 -2.25 -1.34 -2.84 -1.75 -0.95 -1.1
- -5.82 - -4.52 - - - - - - - - -7.93 -7.88 -9.25 -6.61 -6.09 -6.3 - - -1.87 -4.36 -2.19 -2.55 -1.77 -5.72 -4.72 -0.18 -1.96 -0.3 1.62 1.21 1.23 5.44 1.69 -1.07 - -7.4 -6.79 - -6.79 -5.64 -7.79 -5.75 -4.62 -7.03 -9.78 - -10.54 - - - -13.02 - -8.27 - - -5.14
- 0.03 -6.95 -4.13 -6.89 - - - - - - - -5.96 -5.12 -6.43 -9.27 -7.76 -9.49 - -7.64 -0.03 - -0.35 -0.62 0.17 -4.03 - 2.12 -1.06 1.73 3.52 2.41 1.91 4.03 2.51 0.91 - - - - - -4.37 - - -2.65 - - -8.62 - - -7.97 - -9.4 - -3.41 -1.83 -7.44 -
-3.34 -4.23 -2.49 -1.81 -3.72 - - - -5.06 - - - -1.05 - - - - - - - - - - -2.92 -2.38 - - -5.01 -2.32 -4.39 -5.16 -2.66 1.05 5.49 3.16 - - - - - - -7.36 - - - - - - -4.39 - - - - - - - - -
- -0.6 - -5.2 -4.18 - - - - - - - -5.16 - - -8.21 - - - - -0.18 - 0.27 -0.38 -0.02 - - 2.3 -3.5 2.36 4.58 3.92 1.0 0.53 -0.9 - - - - - - - - - - - - - -4.56 -5.88 -4.34 - -8.93 - - - - -
-13.96 - -7.05 -3.24 -8.05 - -8.26 -13.6 -12.91 - - - -8.08 -8.15 -8.1 -7.41 -7.63 -6.18 -8.83 -10.16 -4.24 - -4.92 -4.88 -5.08 -5.36 -9.36 -3.79 -4.84 -3.94 -3.3 -3.23 -2.57 5.59 2.97 -0.95 - -9.21 - -8.33 - -7.91 -8.0 - -6.31 -5.7 -9.84 -3.39 -4.83 -6.3 -7.59 -5.66 -6.31 -4.95 -3.57 -4.23 - -3.79
0.8 1.27 0.3 -1.45 -7.05 - - - -10.62 - - - 0.51 -0.56 -1.56 -1.72 -0.94 -2.1 -1.36 -2.16 0.16 -0.55 0.33 -0.13 -0.18 -2.47 -3.01 1.42 -0.66 1.62 3.79 2.78 1.22 2.59 -0.14 -2.32 -2.77 -2.89 -3.02 -2.43 -4.02 -2.86 -2.08 -2.52 -3.91 -1.35 -4.78 -1.53 -1.44 0.3 -0.12 -1.55 -1.84 -1.91 -1.69 -2.22 -2.27 -2.09
- - - - - - - -0.33 - - - - - - - - - - - - - - - - - - - - - - - 0.48 - 5.46 - - - - - - - - - - - - - - 3.49 - - - -1.3 - - - - -
- - - 0.47 -1.44 - - - - - - - -1.44 - - - -1.57 - - - - - - - - - - - - -3.25 - -3.36 -1.68 5.29 3.9 - - - - - - - - - -0.51 - - - -1.33 - - - -7.15 - - - - -
- -4.79 -8.32 - -8.32 - - - - - - - - - - - - -8.02 - - -0.55 - 0.07 -0.43 -0.59 - - 1.28 -3.77 1.31 4.38 4.12 1.51 3.13 -2.98 - - - - - - - - - - - -10.59 -6.83 -7.98 - - - -10.47 - - - - -
- -3.61 - - -7.3 - - - - - - - -8.12 - - - - -7.0 - - -0.36 - -0.4 -1.18 -0.89 - - 1.16 -2.75 1.13 4.13 3.67 0.75 4.23 -2.31 - - - - - - - - - - - -9.57 -7.35 -6.96 - - - -9.45 -7.0 - - - -
- -2.84 -1.0 -2.64 - - - - - - - - 0.7 -6.57 - - -3.01 - - - -0.13 - -0.08 -0.69 -1.39 -4.95 - 0.89 -3.87 1.49 4.25 3.56 0.87 3.8 - - - - - - - - - - - - - -3.07 -5.69 - - - -3.85 - -3.42 -0.05 -4.55 -
- -4.5 -2.82 -5.51 - - - - - - - - -1.81 - - - - -7.19 - - -1.88 - -0.77 -2.14 -1.61 - - 0.76 -5.41 0.31 3.2 2.35 0.15 5.21 -0.72 - - - - - - -8.0 - - -4.48 - -6.72 -4.68 - - - - -6.7 -4.33 - -3.52 - -
-2.44 - -2.92 3.29 2.95 - -1.62 -2.94 -3.83 -2.28 -2.36 - -0.15 -0.99 0.54 0.1 -0.78 -2.2 - - -1.26 - -0.91 -0.91 -1.07 -0.99 -1.52 0.62 0.04 1.36 2.13 3.32 2.17 - -0.22 -1.62 - 0.17 - -1.21 0.17 -1.21 - - - - - -1.61 1.16 - - - -2.48 -1.03 -2.32 - - -
- - - 2.69 - - - - - - - - -1.63 -1.49 - -2.76 - - - - - - - - - - - - - -0.87 -1.18 -2.36 1.17 5.53 - - - -1.26 - - - - - - - - - - - -2.92 -1.46 - -7.28 - - - - -
- -4.59 - -5.38 - - - - - - - - -4.2 - - - -6.44 - - - -0.97 - -0.79 -1.62 -1.26 - - 1.01 -3.36 1.09 3.33 2.44 0.14 5.14 -4.76 - - - - - - -10.03 - - - - - - -6.02 - - - -12.34 - - - - -
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.