Heatmap: Cluster_136 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
-9.93 - - -1.62 - - - 1.48 -1.2 - - - -0.93 1.69 1.72 0.56 - - - - -1.1 - - - -1.95 -0.44 - -0.13 - 0.82 1.17 1.93 2.5 - 0.36 0.96 - 1.43 - 2.16 1.45 0.78 1.65 - 1.88 - - 1.38 1.85 -0.74 - - 0.01 - -0.75 - - -
- - - - -1.96 - - -3.48 -4.17 -2.89 -2.06 -1.49 - - - - - -4.3 - - -4.0 0.59 -2.08 -1.72 0.09 -0.03 - 0.67 0.98 -0.72 1.97 1.43 2.43 - 2.15 -3.31 1.45 1.59 2.51 0.74 1.67 0.91 2.15 1.81 1.6 - -2.13 -0.72 -1.43 -2.99 - - 0.48 - -3.05 - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.63 5.26 - - - 2.86 - - - - -
-4.47 -1.48 -3.88 -4.24 - - - - - - - - -3.46 -1.35 -1.26 -0.2 -3.44 -1.41 -5.08 -6.33 -5.22 -2.28 -3.58 -3.77 -5.04 -5.81 -7.46 -6.29 -5.11 -4.89 -3.79 -4.16 -2.16 -1.76 -2.49 -3.83 -3.04 -2.61 - -3.48 -2.56 -1.53 -4.57 -3.52 -0.07 -7.15 -0.55 3.52 -3.13 - -5.71 -6.48 0.35 3.81 2.68 -1.6 -4.76 4.13
1.2 - 0.4 0.83 - - - - -1.64 - - - 3.82 - - - - -0.67 - - - - - - - - -0.1 - - - - -0.69 - - - - - 1.86 - - - -1.56 2.8 - - 0.55 -0.48 - 3.64 - - - 1.26 1.82 - - 2.16 -
- - 1.27 1.09 - - - - - - - - - 1.97 1.34 1.04 - 1.05 - - 3.3 - - 0.31 0.0 - - 2.06 1.39 - 1.33 0.76 1.11 - - - - - - - - -1.42 - - - - - - 1.32 - - - 3.89 - - - - -
-7.54 - -5.26 -2.38 - - -6.56 -7.11 -7.48 - - - -6.04 0.35 -5.42 -2.49 -5.52 -0.04 - -3.58 - -4.51 -7.97 -5.63 -6.11 -6.82 -3.12 - -4.01 - - -6.79 -5.68 - -4.48 - -4.39 -7.24 -4.9 -2.68 - -4.55 -5.91 -3.86 -4.34 -2.39 -5.08 3.38 -1.02 - - -7.5 2.42 3.11 2.98 1.91 -1.89 4.12
-5.86 - - 1.84 - - - -8.45 -9.7 - -8.33 -7.46 -3.69 -0.33 -1.56 1.11 -3.93 1.76 - -4.13 -7.57 -3.79 -6.55 -4.15 -2.88 -4.93 -5.13 -6.8 -2.89 -7.15 - -7.42 -1.3 - -3.93 - - -4.75 -4.37 -4.34 - -5.2 - -4.33 -5.52 -5.76 -6.04 2.73 -0.76 - - - 5.13 0.96 -4.19 - - 0.99
-2.67 -6.77 -7.2 0.38 -6.11 - -5.9 - - - - - -3.56 -2.34 -1.7 -1.12 -5.96 -3.82 - - - -4.52 -12.91 -7.84 - - -7.37 - -5.24 - -7.34 - -6.97 - - - - - -4.1 - - - - - - -4.54 - 3.39 -0.61 - - - 0.17 3.75 3.03 -0.66 -5.8 4.37
-3.86 -3.89 -1.48 -1.64 -2.29 - - -7.22 -5.52 - - - -1.18 1.32 1.91 2.14 1.33 1.97 -0.86 -2.4 -3.28 0.88 -4.39 -3.38 -3.2 -3.47 -1.59 -2.98 -1.65 -0.92 -4.27 -4.71 -3.86 - - -2.94 0.04 -0.77 -1.22 0.81 -0.22 -0.63 1.18 -0.18 -2.38 1.39 -4.58 2.47 1.66 -0.17 0.17 -0.77 2.57 2.25 -0.27 -3.48 - -0.74
- - -9.75 -2.68 -6.45 -10.65 -6.92 -10.58 -10.16 - - - -9.1 -3.69 -4.77 -4.77 -1.77 -1.05 - -6.32 -8.57 -2.78 -7.9 -7.53 -7.12 -8.3 -8.39 -8.9 -6.87 -7.45 -8.87 -8.98 -8.39 - -9.85 -7.84 -8.55 -8.29 -9.04 -6.57 -8.04 -5.51 -8.05 -8.0 -3.57 -3.24 -9.3 2.83 2.0 -11.59 -11.19 -9.29 -0.44 2.03 3.77 3.92 3.16 1.49
- -6.06 -6.63 1.13 - - -4.53 -7.39 - - - - -6.18 - - -6.23 -4.25 -3.79 - -2.06 -5.64 -2.29 -6.88 -6.34 -6.15 - -7.0 - -6.7 -6.24 -2.54 -3.18 -3.87 - - - - - - - - -5.39 -4.32 -2.42 - -0.59 -4.79 2.0 0.03 - - - 0.55 2.44 3.2 4.09 1.32 3.71
-1.65 1.43 -5.24 3.23 -4.02 -4.42 0.12 -7.93 -7.27 - - - - -4.38 - -5.46 -0.31 0.38 -1.76 -0.43 - -4.54 - -6.84 - -3.85 -0.92 - -3.76 -4.76 - - -4.85 - - -3.72 - -3.15 - - - -6.39 - - - -3.2 - 4.27 -0.97 - - - -1.7 3.24 3.02 0.05 -4.55 0.38
-8.8 -8.83 -6.96 -3.14 -4.12 - -5.55 - - - - - -7.97 -3.82 -5.68 -4.77 -6.62 -6.27 - -8.93 -6.24 0.85 -9.23 -8.12 -6.89 -8.41 -4.03 -6.71 -5.49 -7.24 -7.15 -6.48 -6.61 - -3.81 - -3.77 -4.67 -3.35 -2.21 -2.84 -3.94 -3.12 -3.31 -7.32 -3.59 - 1.78 4.61 - - - 1.78 4.46 -7.06 -5.24 -1.27 -0.07
-0.66 -0.68 -0.61 - - -2.13 - -1.43 -2.84 -3.4 -3.13 -4.03 -2.96 1.51 1.29 0.73 -3.05 -4.04 -0.98 -3.02 -1.53 -3.14 - -1.98 -1.45 -0.07 -2.82 -1.69 -0.83 -0.57 0.82 0.39 1.79 - 2.48 0.66 1.96 2.34 1.71 1.17 0.84 1.7 0.8 1.17 1.11 - - 0.72 -0.31 -2.01 -2.68 - 0.26 -4.07 - - - -
- - - -2.06 -3.13 - -0.97 2.32 -0.05 - - - -3.13 -0.3 -2.95 -0.38 -2.32 -2.62 - -3.23 - 1.12 - -7.13 -6.31 - -4.01 - - - - - -3.61 -2.25 - -3.84 -3.09 -2.05 - -0.81 -2.05 -2.38 -3.05 -2.01 - - -5.33 2.76 3.79 - - - 3.74 3.09 -3.54 - -4.73 0.92
3.24 - - -0.27 0.63 - - -1.17 -2.95 - - - 0.74 -1.23 - 0.4 -0.5 -1.76 - 1.54 - - - - - - - - - - - - - - - - - - - - - -1.57 - - - - - 3.85 1.59 - - - 4.24 0.73 - - - -
- - - -2.94 -5.74 -5.64 -7.35 -10.69 -7.08 - - - -6.26 0.43 -0.2 1.23 -6.23 0.78 - -2.29 - 2.37 - -4.62 -4.77 -6.1 -4.15 - -3.78 - - -8.35 -3.37 - -3.7 -1.79 -0.72 -0.32 -0.89 1.03 -0.61 -0.17 -0.61 -0.49 -0.16 - -5.97 4.5 1.04 - - -4.81 3.44 0.35 -7.18 - - -0.46
-1.03 -2.57 0.81 -0.68 -2.07 - -3.11 -3.11 -3.76 -5.19 -5.72 -4.39 -0.02 0.39 -0.07 -0.15 -0.33 -1.94 -1.57 -0.68 -0.86 -0.91 -1.31 -0.86 -0.53 -2.78 -1.6 -0.53 -0.12 -0.86 0.66 -0.82 -0.3 -0.87 0.07 -1.36 -2.47 -1.78 -1.99 -1.33 -2.0 -2.71 -1.89 -2.96 -3.15 1.89 -2.44 3.81 1.12 -4.29 -3.07 -0.9 1.41 2.67 0.62 -1.13 -2.2 1.91
0.28 -0.93 -0.39 0.52 -3.72 - -4.91 -10.83 - - - - -2.06 -2.87 -4.56 -3.99 -3.0 -1.04 0.45 -1.76 -1.41 0.51 -1.78 -1.5 -1.96 -1.4 0.06 -1.08 -1.17 -1.21 -1.65 -1.23 -1.38 -2.23 0.03 -0.65 1.0 0.33 0.72 0.39 -0.08 0.29 1.13 0.88 -0.89 -1.12 -4.85 0.92 1.11 -0.63 0.43 -2.32 -0.14 2.12 3.55 0.43 -2.45 2.19
-1.2 -2.32 -2.01 -0.87 -5.57 -5.03 -5.19 -3.25 -4.23 -4.77 -4.75 -6.09 -1.71 -0.05 0.13 0.3 1.04 1.38 -2.48 0.43 -0.87 0.46 -1.52 -0.81 0.08 1.0 0.76 -0.71 0.26 -0.54 -1.68 -0.18 1.26 2.24 1.16 0.51 -0.42 0.26 0.38 -0.08 -0.14 0.51 -0.43 -0.4 1.08 -2.19 -0.75 1.16 1.33 -0.64 -0.76 -2.24 2.04 0.43 -3.23 -0.19 -2.9 -0.61
- - - - -3.98 - - - - - - - -3.35 -1.13 0.13 3.09 - -0.14 - - - - - - - - - - - - - - - - - - - - - - -1.98 -4.36 - - - -4.84 - 4.68 -0.16 - - - 3.21 -0.48 2.43 -4.24 -4.59 2.18
-3.53 -2.44 -4.61 3.28 - - -4.47 - - - - - -5.71 -2.64 -4.16 -4.14 -1.25 -1.49 - -1.11 - 2.42 - - -6.07 - 0.19 - - - - - - -2.0 - - -1.85 -3.92 -0.81 - - -1.89 - - -2.76 -4.73 -6.0 4.15 3.04 -5.42 -4.95 -3.73 1.39 2.56 -4.29 - -3.42 1.8
- - - - - - - - - - - - - 0.66 -0.73 2.12 - - - - - 2.5 - - -2.31 - -0.57 - -1.2 - - - -2.91 - - -0.24 - - - - - -3.96 - - - - - 4.87 - - - - 0.94 1.73 -0.73 - 2.26 1.84
- - - -6.3 - - - -9.24 - - - - -6.15 -0.58 -4.23 -2.73 -4.78 0.16 - -6.01 - 0.14 - -8.33 -5.51 - -6.79 -6.63 -6.48 - - -7.23 -5.75 - -2.08 - -3.34 -2.81 -3.25 -2.86 -2.25 -2.22 -2.11 -2.21 -2.75 -3.74 -3.47 1.31 3.19 - - -6.22 4.07 4.41 -4.74 - - 1.66
- - - - - - - - - - - - - - - - - - - 4.03 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.04 - - - 3.47 3.81 - - - -
-2.4 - - -1.19 - - - -5.58 - - - - -3.36 -2.74 0.82 4.13 - -1.79 - -2.55 - 1.25 - -3.96 -2.17 - -1.83 - -2.74 - - - -3.63 - - -1.78 - -0.82 0.21 - - -2.34 -0.65 - - - - 4.19 1.09 - - - 2.28 -0.36 - - - 2.42
- - - 2.37 - - - - - - - - - - - - - -4.13 - - - - - -2.24 - - - - -13.26 0.92 - - - - - - - - 4.35 - - - - - - - 1.58 4.3 - - - - 2.91 - - - - -
- - - 4.44 - - - - - - - - 0.91 - -0.74 - 1.59 - - - - - - - - - - - - - - - - - - - - 0.89 - - - -2.35 - - - - - 0.2 - - - 0.4 4.4 2.33 - - - -
- - - - - - -0.95 -3.18 - - - - - -2.01 - - -0.43 -2.11 - - - - - - -2.52 - - - - - - - -2.58 - - 0.99 1.67 0.49 - - 3.29 0.01 0.85 1.75 1.55 2.1 - 3.2 -0.46 - - - 1.22 3.73 -0.78 - - -
-6.63 -8.6 -3.88 -6.47 -4.29 - -7.66 -12.32 -12.39 - - - -6.85 0.01 -4.98 -2.16 -5.28 -2.34 -3.71 -3.15 -10.19 1.97 - -8.35 -8.13 -3.71 2.37 - -5.48 - - -9.6 -9.5 - -4.8 -4.91 -3.34 -3.92 -1.93 -0.37 -2.13 -2.26 -0.71 -0.44 -5.99 -2.98 -3.48 1.02 4.51 - -8.78 -7.41 1.83 3.04 -0.02 -0.34 -0.68 2.22
-5.01 -6.65 -3.55 -5.44 -5.28 - -8.99 -15.46 -15.38 - - -14.22 -6.7 -3.43 -9.61 -3.88 -4.14 -3.07 -1.82 -3.12 -6.79 2.53 -10.91 -7.0 -6.05 -1.95 2.79 -7.14 -3.97 -5.94 -7.16 -5.56 -5.14 -3.66 -3.8 -4.88 -0.77 -1.61 0.95 1.65 0.51 -0.09 1.23 1.01 -5.13 -2.73 -3.87 1.75 3.82 - -10.24 -8.54 -0.96 2.93 0.39 0.43 -0.17 0.69
- - - 2.05 -2.66 -2.47 -3.35 -4.71 -0.23 2.69 2.61 2.67 -1.41 -2.97 -4.19 -4.48 2.71 1.58 - -2.6 - -2.04 - -7.15 - - -5.54 - - - -3.66 -6.19 -6.47 - - - -3.73 - - -0.88 -2.64 -2.91 -2.64 - - -1.5 0.15 3.34 -0.39 -6.25 -2.33 -1.58 2.6 0.57 -4.11 -1.49 - 0.07
- - - 3.56 - - - - - - - - - 1.29 -3.11 -2.14 - -2.88 - - - 1.94 - - - - -1.19 - - - - - - - -2.03 -2.64 1.11 0.27 -0.64 -0.11 0.36 1.07 0.7 0.4 2.16 - - 2.12 1.93 - - -3.24 2.09 2.48 - - - 2.26
0.33 - -0.05 1.19 3.74 - 0.24 1.88 0.42 -0.77 -2.11 - 2.04 -2.43 -1.57 0.03 1.03 0.56 - 0.13 -0.69 - -1.66 -1.66 -0.77 - - -0.67 -1.79 0.33 - 0.19 0.14 - 3.06 - - - - - - -1.57 - - - -0.7 - 0.1 0.73 - 1.05 - 0.99 -1.09 - - - -
-6.08 - - 4.52 -2.77 - -2.3 - - - - - -4.65 2.01 -2.24 -2.1 -4.05 -2.29 - - - - -6.21 - -7.66 - -4.41 - - - - - - - - -3.59 1.11 0.83 0.63 1.4 0.72 0.79 2.07 1.57 -1.05 - -3.52 -1.72 0.21 - -5.87 -3.52 3.02 -1.03 - - - -1.81
0.83 0.58 -1.46 -3.01 - - - - -7.81 - - - 0.15 0.21 -0.41 0.42 0.8 -0.51 -1.74 -1.45 -0.57 -3.63 0.61 -0.34 0.6 -0.4 -4.57 -0.22 -0.28 -0.84 0.29 0.06 0.14 -1.74 -2.49 - -3.05 -4.15 -3.0 -2.26 - -3.11 - - -3.08 -0.56 0.44 3.73 0.51 -4.7 -2.81 -0.95 2.06 3.19 -0.68 -5.13 -0.91 1.39
- - - - - - - - - - - - - - - - - 0.19 - - - - - - - - - - - - - - 0.73 - - - 3.81 2.9 - - - 1.11 - - - - - - - - - - 2.26 - - - - 4.74
- - - - - - - - -1.29 - - - - - - - 0.84 1.54 - - - - - - 3.65 3.83 0.51 0.68 3.28 - - - 0.63 - - - - - - - - - - - - - - - 0.3 - - - 3.4 - - - - -
- - - - - - - - - - - -0.08 - - - - - - - - - 3.16 - - 2.51 2.85 1.87 - 2.08 - - - 2.55 - - - - - - - - - - - - - - 1.97 2.01 - - - 3.76 - - - - -
- - - - - - - - - - - - - - - - - -0.54 - - - 1.17 - - 3.26 4.02 1.74 - 3.42 - - -0.6 -0.37 - - - - - - - - - - - - - - - 2.35 - - - 3.12 - - - - -
- - - 4.43 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.45 - - - 4.95 - - - - -
-4.65 -4.73 -2.24 -2.72 -4.97 -7.99 - -8.52 -8.92 - - - 1.54 0.03 -0.64 1.57 0.54 -1.71 -7.02 -2.23 0.3 0.88 -0.34 -0.14 -0.83 -4.27 -0.94 1.45 -0.77 1.57 2.99 2.03 1.47 -0.17 -0.18 -6.29 -4.57 -2.93 -3.18 -2.13 -4.5 -3.19 -3.3 -2.14 -5.46 -1.34 -1.42 2.44 -2.3 -4.11 -3.26 0.01 0.37 0.37 -1.21 -6.38 -5.08 2.92
- - - -3.82 -2.84 - - -7.19 - - -6.3 -5.55 -2.7 - - - -2.44 -5.38 - - - - - - - - -5.71 - - - - - - - - - - - - - - - - - - -1.86 - -0.67 -5.56 - - -3.4 1.33 -1.92 5.38 2.32 -3.5 2.77
0.53 -2.47 -1.93 0.97 -1.46 - - -1.35 -1.1 - - - -2.85 1.15 -0.41 2.62 1.9 2.0 - -4.18 -4.51 -1.83 - -4.4 -4.08 - - - - - - -5.98 -5.63 - - - - -3.36 - -2.93 - -6.7 -2.42 - - 1.84 -2.35 2.24 3.87 -3.96 -4.56 -0.92 3.4 -1.11 -2.9 - - -
-1.21 -2.27 -1.77 1.2 - - - - -10.54 - -9.7 - -1.28 -0.85 -1.64 -1.91 1.14 -2.52 -3.31 -1.65 -2.83 -4.04 -3.99 -1.15 -0.94 -0.55 -2.51 -1.62 -0.14 -1.93 -2.77 -1.95 -0.32 -2.34 2.31 1.7 -6.4 -4.64 -3.31 -2.87 -2.5 -1.5 -2.44 -5.27 0.45 0.26 -1.05 2.74 0.64 -7.39 -6.48 -2.14 -0.0 1.8 3.74 2.03 -3.53 1.42
- - 2.43 2.62 - - - - - - - - 3.88 - - - - - - - - - - - - - - - - - - - - - - - - 3.26 - - - - - - - - - - 2.06 - - - 1.69 3.89 - - - -
- - - -2.36 -2.55 - -3.09 - -7.81 - - - -5.46 -5.09 - -6.58 -4.47 -4.91 - -3.91 -2.47 - -5.26 -3.71 -1.98 - - -2.19 -1.27 -0.96 -1.11 1.02 1.96 0.38 2.94 - - - - -5.32 - -7.31 - - - -2.67 -5.47 1.16 1.52 - -5.79 -4.7 0.05 2.34 0.35 3.0 3.97 1.99

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.