Heatmap: Cluster_54 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
-4.51 -5.74 0.51 -2.29 -5.97 - -7.28 -9.14 -9.25 -8.09 -8.78 -7.66 1.79 1.13 0.68 -0.4 -6.95 2.57 -3.76 -5.99 -4.54 - -4.07 -4.23 -3.82 -1.06 -6.35 -5.62 -4.16 -4.08 -3.82 -2.87 -2.52 4.21 2.04 1.05 -2.04 -3.29 -1.24 -0.65 -1.58 -1.06 -0.35 -0.54 -0.09 -3.42 -4.75 -1.18 -0.45 -4.38 -2.58 1.06 0.97 -0.08 -0.1 -1.31 -6.63 1.92
0.5 -0.71 0.19 2.38 -1.52 - -1.7 -3.05 -1.79 -0.68 -0.85 -0.7 1.56 0.78 1.6 1.13 - 0.05 0.62 -0.88 - 1.26 - - - - -4.95 - - - - - - 0.33 2.29 1.06 0.18 0.8 0.95 0.42 -1.05 0.37 1.58 0.99 0.87 -2.55 - -1.85 1.45 - - -0.8 0.34 -0.73 - - - 1.47
-2.25 -1.53 0.63 2.41 1.05 -3.57 1.11 -1.2 -2.95 -2.58 -2.53 -2.5 1.31 0.19 0.42 -0.2 - 1.18 - -4.47 - 0.87 - - - - -1.6 - - - - - - -0.9 1.35 -0.59 1.4 0.27 2.1 0.53 0.29 1.1 1.99 0.92 0.22 -1.17 - -1.92 1.86 - 0.2 0.2 -0.58 0.96 - - - 0.94
-5.21 - -0.51 -1.61 - - - -6.49 -5.09 -3.84 -3.12 -3.62 1.16 0.22 0.71 0.77 -5.34 0.8 -3.92 -4.23 0.06 0.9 -1.27 -0.54 -0.17 -1.96 -0.27 -0.12 0.21 -0.93 -0.94 -0.41 -0.55 -2.6 0.01 0.39 2.08 1.79 1.18 2.16 1.3 1.45 1.95 1.72 1.52 - -3.03 - -1.18 -3.65 0.15 0.34 0.54 -1.92 - - - -0.79
-2.74 -2.09 0.35 0.5 2.13 - 0.29 -5.69 -5.56 -5.85 -6.34 -5.28 0.53 0.31 0.12 0.09 -1.2 -0.2 -2.09 - -0.67 1.62 0.02 0.1 0.07 -0.05 -0.88 -0.95 -0.02 -1.34 -1.03 -0.45 -0.36 - 1.48 0.92 1.34 0.14 1.6 0.68 0.43 0.71 1.79 1.63 -0.63 -1.28 -5.55 -2.79 0.97 -0.29 0.02 -0.95 -0.84 -0.23 -3.82 -2.15 -2.68 -0.38
-1.68 0.4 0.96 -3.77 - - - - - - - - -1.5 0.93 0.76 2.1 -1.98 -0.66 -0.02 -1.88 -0.52 -1.96 - -1.56 -3.01 - -2.52 -0.46 -3.18 -3.5 - -2.72 -3.25 0.9 -2.52 0.01 1.52 1.41 0.85 1.7 1.08 1.75 2.6 2.02 1.82 -0.34 -3.61 -3.45 -3.79 -3.39 0.13 1.35 1.59 -0.82 - - - -3.11
- - 0.6 2.33 0.75 - 1.13 -0.88 -1.16 -1.71 -1.34 -1.38 1.99 -0.94 -0.74 -1.12 - 0.64 - -2.75 - 0.25 - - - - -2.3 - - - - - - 0.82 0.87 0.54 1.77 0.19 2.02 0.75 - 0.65 1.74 1.64 1.51 -1.85 - -3.78 1.9 - 1.1 -0.83 -0.44 1.65 - - - -
- - - 0.65 - - - 2.97 1.46 -0.78 - 0.99 - 3.16 2.09 1.27 - - - - - 1.1 - - - - 1.75 - - - - - -5.12 - - - - - - 2.06 - - - - - - - - 3.41 - 0.56 - - 2.54 - - - -
0.84 0.39 1.15 0.33 -0.52 - -0.56 - -5.12 - -6.29 -8.56 0.13 1.42 1.13 1.21 -0.71 0.41 0.25 -1.18 1.09 -0.44 1.79 0.98 -0.25 - -2.81 0.98 0.31 0.73 0.44 -0.13 0.06 - 1.42 -1.73 0.49 -0.67 -0.91 0.7 -0.33 -0.31 0.72 -0.87 -1.87 -2.51 -4.57 -0.41 0.11 - 2.1 -0.97 -0.24 -0.12 -3.27 -2.17 -2.58 -1.61
-4.87 -2.81 -0.94 0.6 -3.42 - -4.11 -6.19 -7.74 - -9.22 -8.65 1.72 0.66 1.24 1.03 -1.24 1.96 -5.91 -7.21 -0.14 0.36 -1.19 -0.7 -0.44 -1.9 0.02 -0.44 -0.0 -0.27 -0.63 -0.45 -0.39 -1.42 -0.37 -1.79 0.41 0.34 -0.07 1.01 0.47 0.16 -0.13 0.17 -0.33 -0.94 -0.33 -0.55 2.99 -4.88 -0.26 -1.27 0.36 -0.15 0.29 -1.39 -2.54 2.18
- - -0.86 0.6 2.55 - -0.64 - - - - - 2.26 1.71 2.18 2.34 - 1.7 - - - - - - - - - - - - - - - - 1.64 - - -0.32 - 0.65 - 0.33 - 2.06 1.97 - - - 3.31 - - - -0.41 0.03 - - - 1.05
-1.88 - -1.4 2.29 1.57 - -1.31 0.93 -0.54 1.44 1.45 1.04 -1.6 0.7 0.65 -0.26 - 0.58 - - - 2.58 - - - - -0.1 - - - - - - - 0.68 1.15 0.99 1.31 1.48 1.8 - 1.21 1.21 1.52 -0.68 -2.35 - -3.32 1.27 - - -2.11 -0.72 - - - - -
- -4.63 -0.74 2.56 0.37 -3.83 -2.4 -1.19 -1.87 -2.74 -3.04 -2.68 2.22 0.84 0.65 0.74 -1.57 0.28 -4.56 - -0.56 1.3 0.08 -0.14 -0.73 -0.9 0.18 -0.68 -0.75 -0.39 0.18 0.03 -0.38 - -0.29 -0.89 0.07 0.75 1.05 -0.02 -0.45 0.01 0.55 -0.19 -1.24 -4.56 -2.2 -1.04 2.78 -3.34 0.66 0.45 -0.38 0.18 -2.33 -1.53 -1.29 -5.59
0.09 -0.62 0.63 -1.79 -3.76 -1.21 -4.3 -1.38 -1.78 -0.87 -0.91 -0.94 0.23 -0.3 -0.94 -0.88 0.44 0.16 0.03 -0.44 0.41 0.33 -0.54 -0.02 0.13 -1.03 -0.53 0.34 1.15 0.47 -0.34 0.28 0.53 -2.53 0.69 0.03 0.49 0.02 0.31 0.27 -0.31 0.06 0.93 0.72 -0.43 2.0 -1.68 0.32 -0.76 -0.08 -0.07 -1.2 0.59 -0.09 -0.18 0.26 0.33 0.49
- - 1.73 3.91 - - - - - - - - 3.6 -0.92 - -0.91 - 1.05 - - - 4.03 - - - - - - - - - - - - - 0.4 1.3 - - - - -0.94 - - - - - - -1.33 - - 0.45 -1.0 0.55 - - - -
-2.89 -2.29 -1.48 -7.02 -6.85 - - - - - - - -1.94 -1.64 -0.6 -0.49 -0.79 1.11 -4.39 -1.72 -0.42 3.1 -0.61 -0.67 -0.2 -0.64 -0.22 -0.81 -0.59 -0.77 -2.79 -1.5 -0.6 -0.49 0.15 -0.88 1.34 0.71 1.91 2.11 1.34 1.25 1.58 2.05 -0.05 1.29 -1.11 -1.23 -4.24 -2.57 -3.35 -0.69 1.78 -4.99 -5.28 -7.24 -9.52 -0.2
-4.72 -4.22 -1.39 0.38 -0.06 - -1.21 -6.79 -7.08 -6.5 -6.13 -5.74 0.39 0.03 -0.74 -0.74 0.64 0.36 - -4.01 1.01 -0.96 0.66 0.93 1.08 -2.53 -0.91 1.43 1.15 1.01 1.21 1.14 1.14 0.05 0.47 -0.56 -0.55 -0.23 0.12 -0.05 -0.01 -0.42 -1.48 -0.36 -0.03 -4.07 -1.08 -0.54 0.83 -1.61 0.9 -0.46 0.43 0.96 -0.1 0.37 0.16 1.47
3.94 - 3.99 - - - - - - - - - - 2.99 2.56 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.55 - - - 2.82 - - - - -
-1.14 -1.31 -1.37 2.55 2.7 - 0.24 - -5.0 - - - 0.27 0.81 0.28 -0.75 - 2.45 -1.16 1.84 - -2.25 -0.91 -0.75 -1.67 -2.66 -0.9 -1.21 -1.13 -1.19 - -1.65 -1.02 0.16 - - - - - -1.29 - -0.59 -0.65 1.39 - 2.09 0.33 -0.86 0.97 0.04 1.55 0.06 -0.08 0.72 0.15 0.24 -2.32 -0.2
- - 2.06 - 3.48 - 0.77 - - - - - - - - - -0.18 - - - - 4.55 - -23.69 -0.41 - - - - 1.45 - - 0.54 - - - - - - - - -1.08 - - - - - 2.1 - - - - -1.21 2.69 - - - -
2.92 1.6 2.16 1.01 - - - - - - - - -0.05 0.31 -1.25 -0.27 - 0.95 2.36 2.7 - 2.27 - - - - - - - - - - - - - - - - - 1.96 - -1.36 - - - 0.24 - 0.54 1.2 - - -1.43 0.17 -0.56 1.69 0.35 1.65 -
0.87 0.69 -0.11 -0.2 -2.29 - - - - - - - 1.12 -1.6 -2.77 -2.59 - -0.47 -0.29 -0.36 - -1.41 - - - - -2.38 - - - - - - 1.69 1.7 1.23 1.46 1.94 1.89 2.11 0.3 1.43 1.48 2.75 1.43 -3.5 -3.87 -2.08 0.58 - -0.24 -0.76 -0.7 0.93 - - - 0.56
- -1.59 - 3.2 - 0.95 -0.72 -0.1 -0.52 1.51 1.71 1.57 0.22 0.04 -0.72 -3.07 -1.99 -0.27 - - - 2.65 - -1.31 -1.89 - -1.11 -0.84 -1.9 -1.19 - -1.66 -1.24 - 1.5 0.22 - -0.27 1.07 0.63 - -0.4 - 1.11 - 0.75 -2.92 -0.08 -2.68 - 2.47 - -0.39 -0.92 - -1.5 -1.71 -
- - - - - - - - - - - - 1.7 2.39 - - 2.53 -1.69 2.18 - - - - - -0.28 - - 1.07 - - - - - - - - - - - - - -0.41 - - - 2.28 - 3.93 - - 3.44 -21.59 -1.22 - - - - 1.94
-0.79 -1.75 2.42 -0.11 - - - - - - - - 4.95 -0.45 0.02 -0.99 - -0.05 -0.6 -1.85 - 1.68 - - - - - - - - - - - - - - - - - - - -2.42 - - -0.04 -1.5 - -1.89 1.66 - -1.68 0.44 1.39 1.64 - - - -1.64
2.43 0.47 - 0.71 0.03 - -0.56 -0.82 0.21 - -1.48 -2.9 0.73 0.75 0.03 -0.65 - 1.74 - 2.17 - 3.28 - - - - - - - - - - - - 2.16 - - -0.01 - - - -1.21 - - - -0.12 - -1.7 1.72 - -0.04 2.29 1.59 0.75 - - - 1.13
-0.28 -0.35 0.48 2.21 -3.29 - -4.46 -6.55 -4.61 -4.89 -4.69 -6.53 2.14 0.78 0.58 0.35 -0.85 0.28 -1.14 -1.14 -1.08 0.21 -1.01 -1.01 -1.8 -2.16 -1.56 -1.07 -1.67 -1.42 -0.5 -0.92 -1.32 - 0.7 0.32 1.13 0.28 -2.82 1.33 -1.24 0.61 1.35 1.31 0.93 0.46 -3.17 -1.99 1.7 -2.03 2.28 -0.9 0.12 -1.28 -3.45 -2.31 -0.69 0.5
- - -1.37 1.51 1.45 - 1.12 -2.42 - - -4.62 -4.37 1.69 1.91 1.22 1.13 - 1.33 0.29 - - 2.04 - - - - -0.8 - - - - - - - 1.45 - 2.75 - 1.51 1.5 - 1.14 0.51 - - - - - 2.2 - - 1.11 0.7 - - - - 1.34
0.01 -0.74 -0.74 0.32 -3.89 - -3.32 - - -9.73 - - 0.95 -0.23 -0.25 -0.45 - -0.44 0.15 -0.66 - 1.4 - - - - -1.05 - - - - - - - 2.62 1.73 1.54 1.77 0.92 1.38 1.51 1.34 2.86 0.61 0.94 -1.3 - -2.59 0.87 - -0.03 -0.76 -0.38 1.64 - - - -2.36
-0.88 -0.87 -0.18 3.17 -0.8 -3.08 -1.84 -1.54 -1.87 -3.27 -3.21 -3.15 0.2 0.41 0.36 0.54 -2.15 -0.53 -0.29 -0.84 -0.37 0.43 -0.7 -0.61 -0.72 -2.68 -1.51 -0.76 -0.2 -0.84 -1.38 -0.85 -0.77 - -0.33 -1.47 0.81 0.62 -0.19 0.98 0.94 0.19 0.88 0.48 -0.66 1.22 -1.92 -1.51 1.28 -1.25 -1.08 0.45 -0.78 0.65 0.95 0.44 0.68 -0.64
-3.58 -3.45 -4.59 1.38 -1.27 - -1.43 0.46 -0.34 0.93 0.68 0.92 0.82 0.72 0.69 0.13 - 2.14 - -3.6 - 0.61 - - - - -2.09 - - - - - - -0.98 1.17 0.03 1.33 1.17 1.54 1.32 2.03 1.83 1.09 1.84 0.22 - - - 0.83 - -3.92 -1.06 0.02 -0.56 - - - 0.98
- - -0.35 1.03 - - -1.06 -1.46 -1.72 -1.14 -1.13 -0.9 2.7 -0.84 -0.32 -0.73 - 1.96 - - - - - - - - -0.52 - - - - - - - 2.95 1.0 1.52 1.09 0.57 2.64 0.57 1.21 -0.29 - 0.52 1.27 - -2.23 2.14 - - 0.33 0.95 -0.27 - - - -
-4.25 -5.09 -0.3 -6.36 - - - -9.67 -11.69 - - - -2.38 0.66 -0.44 -0.53 -1.73 -0.75 -5.15 -4.02 -0.37 0.83 -0.83 -0.62 -0.4 -1.03 -0.68 -0.47 -0.22 -0.42 -1.11 -0.95 -0.51 2.91 1.38 0.94 1.19 1.7 0.99 1.43 1.78 1.25 0.85 0.5 1.79 -0.52 -1.56 -1.48 -2.05 -0.85 -0.1 -0.84 -1.16 0.5 -1.17 -1.06 -1.08 0.66
0.96 - - 2.16 0.59 - - - - - - - -0.97 - - - - -1.89 1.07 - -1.0 3.17 - - -0.55 - - - - - -1.16 -1.18 1.46 - 2.64 - - 2.95 2.59 - - 1.54 1.73 - 2.43 - - - 0.83 - - - - - - - - -
-0.08 -2.16 -0.05 3.43 -2.02 - - -7.52 -4.97 - - - 1.97 1.61 0.61 0.85 -1.19 -0.4 -1.16 -2.73 -0.08 -2.46 -0.39 -0.67 -0.41 -1.51 -1.69 -0.75 0.0 0.03 -0.33 -0.01 -0.08 - 1.02 -1.78 -1.0 -0.34 -0.52 0.11 -0.53 -0.63 0.18 -1.49 -0.58 -0.12 -2.05 -0.39 2.04 -0.88 0.79 -0.09 0.07 0.03 -0.58 0.22 0.04 -1.44
-4.03 - -3.55 - - - - -10.07 -7.86 -8.81 - - - 0.67 -1.03 -0.47 0.54 -1.79 - -6.04 1.89 -5.23 2.14 2.15 2.1 0.59 -2.95 1.49 1.27 1.68 1.73 1.29 0.94 3.23 -2.6 -2.54 -4.58 -3.35 -1.62 -2.38 -3.07 -3.43 - -5.96 -2.75 - -5.4 -0.02 - -2.76 0.92 -2.35 -1.06 -4.8 -0.61 -1.49 -4.29 1.64
-1.99 -3.06 -0.09 -5.52 0.42 -6.05 -1.51 -5.59 -5.94 -5.72 -5.84 -5.87 -1.33 -1.48 -3.41 -3.11 -0.67 -1.5 -1.91 -2.44 0.52 -0.02 0.02 0.0 0.62 0.44 -0.21 0.14 1.12 0.41 -0.36 0.01 0.82 1.54 -0.3 0.04 2.01 1.64 1.48 1.69 1.49 1.33 0.85 0.83 0.65 -2.85 -0.81 -0.88 -1.5 -0.08 -1.28 -1.59 -1.1 0.89 -1.24 -1.8 -0.3 -0.68
-2.39 -1.86 0.34 2.38 -3.4 -2.3 -3.7 -1.74 -2.97 -3.28 -3.55 -3.58 1.72 1.56 1.22 1.07 -0.1 0.81 -2.81 -2.1 0.59 -0.37 -0.4 -0.27 0.02 0.02 -0.53 0.02 0.25 0.01 -0.29 -0.21 -0.01 -3.18 -0.97 -2.3 0.26 -0.16 -0.66 -3.04 -1.98 -1.1 -1.14 - -0.69 0.89 0.51 -0.55 0.83 -0.36 0.46 0.52 0.48 -0.12 -0.16 0.51 0.99 1.25
- - -0.72 2.3 -1.94 - -2.6 - -5.24 - - -5.13 1.9 0.22 0.5 0.49 -1.84 1.29 - - -0.24 2.23 -0.62 -3.15 -2.7 - -0.84 -0.81 -2.22 -0.37 -1.67 -1.45 -1.48 0.86 -0.74 -1.66 2.47 2.0 1.65 -1.31 1.06 1.28 1.41 1.1 -1.1 - - -1.68 1.12 -1.49 -0.29 0.53 -1.01 -0.93 -2.42 - - -
0.98 0.85 0.27 -0.09 -0.53 - -1.94 -6.19 - -7.22 -6.29 -6.54 -1.41 -2.29 -2.06 -2.81 -1.8 -1.6 0.42 0.26 -1.77 -0.48 -3.78 -1.93 -1.62 -3.15 -4.68 -2.22 -1.86 -2.66 -0.68 -1.31 -2.25 - 1.38 0.32 1.4 0.89 1.92 2.4 1.22 1.4 1.57 2.26 0.92 1.54 - -2.24 -0.3 0.28 0.61 0.5 0.39 -1.17 -2.44 -1.45 -1.33 -1.09
1.33 0.36 0.67 1.55 -0.08 - - - - - - - 1.56 -0.27 - -2.02 - 1.11 - -0.7 0.66 1.16 0.4 -0.17 0.37 -1.03 - 0.52 0.98 0.8 1.01 -0.29 0.33 - 1.19 - - - 1.99 - - -0.47 - - - 1.96 - 0.81 1.47 -1.5 2.21 - 1.56 0.0 - - -0.8 -
- - -1.18 3.38 1.34 - 0.22 -3.42 - - - - 2.93 0.98 1.01 1.06 -1.78 0.56 - -2.71 -2.62 0.64 -0.33 -0.05 -1.25 - -1.52 - - -0.61 -0.34 -0.3 -0.56 - -0.33 - 0.58 -0.99 - -1.32 - -0.98 -0.95 - - - -2.16 - 3.2 - 1.73 -0.03 -0.53 -2.93 -1.43 -0.82 -0.27 -
0.43 0.11 1.59 3.1 -0.89 - - -4.68 -1.69 -1.7 -1.4 -2.25 1.48 1.15 1.72 2.22 - 0.41 1.48 -0.09 - - - - - - - - - - - - - - - - 0.07 -0.87 1.11 -0.26 2.11 -0.32 - - - - - - 2.71 - -0.24 0.95 -0.49 -1.88 - - - 2.07
-1.45 0.95 0.88 1.17 1.48 - 1.83 - - - - - 1.08 -0.53 -0.71 -1.43 - - 0.83 -0.05 - 1.36 - - - - 1.68 - - - - - - - 1.83 - 1.68 1.64 - - - 0.42 2.26 - 1.14 -1.4 - - 0.85 - - 2.11 1.23 1.62 - - - 1.49
0.53 -1.69 1.97 2.51 0.73 - - - - - - - 1.11 1.06 1.88 2.03 - 2.01 1.12 -0.94 - 3.17 - - - - - - - - - - - - -0.05 -0.0 -0.34 -0.28 1.75 0.69 - -0.17 - - - -2.17 - -3.05 -0.37 - 1.54 0.28 0.26 0.45 - - - -
0.3 -0.78 0.53 2.18 - - - - -7.67 - - - 2.01 1.39 1.03 0.87 - 0.28 0.02 -1.79 - 1.37 - - - - -3.23 - - - - - - -2.53 2.29 1.27 0.51 -0.5 0.25 1.12 -0.75 0.29 2.63 1.95 -0.19 -3.6 - -5.13 2.2 - -4.18 0.4 1.04 -1.34 - - - -2.5
-5.22 - -0.9 1.28 0.42 -4.75 1.45 -3.59 -4.13 -5.1 -6.34 -5.49 1.28 -0.45 -0.24 -0.71 0.53 -1.02 - - -0.42 1.16 -0.63 -0.4 -0.34 -2.55 -0.37 -0.23 0.39 -0.39 -0.56 -0.26 -0.23 - 0.22 -0.57 1.9 1.24 1.23 1.15 1.33 1.12 2.07 1.37 1.6 -1.64 -3.66 -1.22 0.41 -4.61 0.26 -1.78 -1.44 -0.85 -2.3 -2.51 -2.5 -0.83
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.