Heatmap: Cluster_198 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
- - - - - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.91 2.34 0.14 3.18 -5.9 - - -7.99 -8.94 -8.52 - - -0.35 -0.34 -1.76 -1.89 2.54 -0.95 0.7 0.93 0.5 -2.58 1.2 0.44 -0.11 -2.47 -3.06 1.07 -0.44 0.42 1.55 0.71 0.28 -1.91 -0.78 -3.07 -3.15 -3.43 -5.41 -2.66 -2.6 -2.7 -3.18 -2.56 -2.38 -2.36 -5.48 -2.03 -1.44 1.16 1.29 -2.16 -1.95 -2.73 -0.12 -1.68 -0.47 -1.64
- -2.08 0.92 0.55 - - -2.08 - - - - - 3.86 2.03 - -3.18 -2.41 -0.99 - - -1.74 - -2.69 -4.5 -0.9 - - - -2.24 1.22 2.13 1.49 1.29 4.19 1.44 - - - - - - -4.52 - - - - - - -3.17 -1.45 - - -4.5 - - - - -
- - - - - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.09 - 3.67 1.75 - - - - - - - - 5.24 - - - 0.21 -0.75 - - - - - - - - - - - - -1.94 -4.97 - -0.7 - - - - - - - - - - - - - - -1.89 - - - -8.3 - - - - -
-8.12 -5.22 -8.79 3.71 -3.83 - -8.14 -8.78 - -9.05 -10.37 - -7.04 -3.69 -5.77 -6.52 4.98 -1.98 -6.7 - -3.26 - -4.99 -3.68 -2.74 -8.5 - -2.29 -1.97 -0.83 -0.94 0.28 0.59 2.04 1.88 -7.25 -6.52 - - - -5.48 -8.38 - - - -8.73 -8.63 -9.28 -8.22 - - -5.56 -4.76 -4.83 -4.42 -3.53 - -5.95
-5.18 -3.75 -2.08 -3.98 - - -5.33 - - - - - -1.92 -0.56 -2.88 -3.53 4.05 0.58 -4.37 -0.64 1.31 -3.09 -0.35 0.5 -0.4 0.79 -1.32 1.73 2.97 2.09 0.83 0.68 0.3 0.07 0.98 0.4 -4.61 -5.51 -3.54 -4.42 -2.96 -1.49 -3.86 -3.5 -0.17 0.83 -3.54 0.21 -6.29 -6.65 -5.38 -4.2 -1.74 -1.65 -5.87 -5.31 - -5.1
1.22 -3.38 3.51 2.84 -1.2 - -4.59 -5.1 -4.26 -5.05 -6.28 -4.23 5.01 -5.82 - - -0.6 -2.56 - - - - -5.07 -6.8 -5.35 -4.19 -5.48 -2.37 - -4.21 -0.67 -3.47 -3.47 -1.13 -2.83 - -2.98 -2.49 - -3.31 -1.94 -2.53 - - - -3.86 - - -0.86 - -5.08 - -4.28 - - - -4.55 -
- - - - - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - -
- - - - - - - - - - - - - - - - 4.82 - - - - - - 0.77 - - - - - - - - - - - - - - - - - - - - - - - 3.93 2.09 - - - -0.12 2.93 - - - -
- 2.64 - 1.77 -0.49 - 2.23 -2.69 0.57 -2.27 -2.35 -1.07 -0.74 - - - 4.67 -1.37 - - - - -0.68 -3.21 -1.67 - - - -1.3 -0.0 2.04 1.17 0.38 - - - - - - - - - - - - - - - 0.75 - -0.2 - -1.63 - -0.1 - - -
- 2.97 - - - - - - - - - - 5.65 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - 5.72 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.36 - - - - -
- - - 4.14 - - - - - - - - -3.33 -1.77 - -5.94 5.18 1.34 - - -3.97 - - - - -3.51 -3.39 - -3.2 - - -5.51 - - - - - - - - - -5.81 - - - - -5.51 - -1.29 -3.3 -2.91 - -5.85 - - - - -
-5.03 -4.96 -6.78 2.88 -5.42 -9.16 -6.39 -8.62 -9.26 -11.89 -10.78 -12.17 -4.23 -4.3 -5.21 -6.13 5.52 -1.28 -9.13 -6.5 -7.75 -0.47 - -8.06 -6.46 -4.67 -2.0 -7.71 -4.88 -7.47 -8.87 -8.04 -4.36 -4.22 -0.9 -2.13 -1.8 -2.69 -1.75 -1.54 -2.86 -2.45 -2.55 -1.93 -3.67 -10.2 - -6.14 -3.85 -9.28 -10.75 -6.37 -9.03 -3.46 - - - -
-4.1 -5.36 -3.8 -0.37 -0.97 - -0.79 -6.81 -9.38 - - -9.08 -2.04 -2.52 -4.62 -4.46 2.71 -5.79 - -6.84 -4.34 - -7.39 -5.6 -4.61 -0.07 -3.76 -4.21 -4.17 -5.2 -4.87 -4.55 -3.59 -3.66 -2.81 0.61 2.52 2.34 1.86 2.48 2.24 2.35 2.26 1.92 2.57 -7.97 -3.58 -1.66 -2.52 - -6.4 -5.81 -3.52 -4.62 -2.12 -3.79 -1.52 -5.6
3.1 3.59 3.08 -5.24 - - - - - - - - 3.76 -5.98 -8.66 -9.28 -0.84 0.24 -4.34 -3.02 -3.57 -5.3 -1.65 -1.25 -2.89 - -9.95 1.45 -6.22 -1.9 2.2 0.07 -4.83 1.84 -3.8 - - - - - - -9.65 -6.69 - - - - -8.9 -5.63 - - - -10.47 -7.1 - - - -
1.94 - 3.05 - - - - - - - - - 5.24 - - - - -0.33 - - - - - - - - -0.9 - - - 2.18 - - - - - - - - - - - - - - - - - 1.24 - - - - - - - - -
-5.41 -6.9 -0.17 2.55 -5.49 - - - -7.72 - -8.65 - -1.9 -0.68 -2.59 -2.84 4.44 -1.63 -0.88 -2.01 0.69 -4.48 0.36 1.04 0.51 -1.75 -4.94 0.55 1.44 0.92 0.7 -0.03 -0.96 -3.65 -4.4 -6.22 - - - - -4.45 -7.47 - - - 1.83 -1.33 2.04 -3.62 -5.79 -6.6 -0.46 0.22 -1.22 -3.07 -7.03 -5.08 -1.41
- - - - - - - - - - - - 4.95 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.76 - - - - - - - - -
-3.3 - 2.34 - - - - - - - - - 3.87 -1.53 -2.99 -1.89 0.63 1.97 0.42 - 0.81 - 1.77 0.36 -0.26 - - 0.63 -1.2 0.25 -1.9 -1.39 -0.21 3.84 0.66 -2.43 - - - - - -5.9 - - - -2.7 - 1.06 -4.44 -2.14 -4.28 - -5.81 - - - -4.3 -
- - - 2.11 2.45 - 2.88 - - - - - 4.8 0.42 - - - - - - - - - - - - - - - - - -0.2 - - - - - - - - - -0.22 - - 2.58 - - - 1.89 - - - -1.53 - - - - -
- -6.21 - 4.35 -7.44 - -8.01 - - - - - -6.15 -4.22 - - 5.23 -7.12 - - - - - - - - -7.31 - - - - - - - - - - - - - - -8.63 -3.65 - - - - - -5.11 - - - -10.25 -8.34 - - - -
0.75 -0.07 1.55 2.12 3.06 - -2.08 -8.66 - -4.69 -5.39 - 3.13 -2.83 -2.44 -2.52 -0.74 -1.85 0.33 0.53 0.09 -4.6 -0.28 -0.27 -0.17 -1.19 -4.02 0.26 0.09 0.35 -0.07 0.97 1.59 -0.05 -0.24 - -2.73 -1.89 -2.66 -2.63 - -2.04 -1.04 -0.63 -2.1 -2.39 -6.86 1.71 0.68 -0.11 -0.2 -2.69 -1.9 -0.03 -1.54 -3.07 -5.28 -3.64
- - -0.71 3.64 3.82 - -0.2 -4.37 - -2.53 -2.5 -1.99 1.43 - -2.8 - -0.09 -1.75 - - -1.26 - -2.6 -0.54 -0.69 - - -0.37 -0.3 -1.88 -1.26 0.05 2.74 - 0.73 - - - - 0.37 - -2.24 0.01 - -0.29 - - 0.28 1.95 - 0.47 -2.1 -1.58 -0.85 - -0.54 - -
-1.73 -1.73 2.99 3.29 3.03 - - -1.72 -2.43 - -1.5 - 4.0 0.09 - -2.22 0.84 -0.42 - - -0.52 - -2.31 -1.76 -3.32 - - -0.25 0.28 -0.01 - -1.12 -0.81 - -0.57 - - - - - - -4.54 - - - - - -1.33 0.09 1.14 - - -1.79 -0.96 - - -1.8 -
-3.81 -4.54 0.51 -0.72 -4.56 - - - - - - - 0.59 -0.38 -5.37 -3.94 4.06 1.14 0.99 0.24 -1.58 -3.43 0.4 -0.64 -0.95 0.75 -3.22 -1.1 -1.72 -3.0 -3.56 -2.81 -2.11 -3.72 -0.01 1.47 -3.02 -1.6 -1.52 -3.4 -1.71 -0.41 -0.85 -1.02 0.71 1.05 -2.73 0.04 -5.69 -1.61 -1.9 0.94 1.02 -1.7 1.91 1.68 -2.34 0.69
-5.37 - 0.24 2.27 -2.74 -2.01 -5.67 -3.84 -3.55 -2.73 -2.89 -2.48 1.3 3.0 1.88 1.04 4.3 1.77 0.38 -1.57 -4.73 - -2.97 -5.39 -5.91 - - -5.45 - -5.38 - -7.46 - - - - - - - - - - - - - 0.79 -2.19 -5.15 -4.39 -1.34 -0.48 0.39 2.38 - - - - -
- - - - - - - - - - - - 5.46 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.79 - - - - - - - - -
- -4.43 -6.3 3.4 -1.51 -2.21 0.32 -2.32 -2.48 -6.52 -5.59 -5.82 -4.73 -0.45 0.44 0.95 2.61 -0.19 - - - 1.9 -6.86 -6.94 -5.6 1.62 -0.62 - -6.14 -6.1 - -5.21 -4.91 - -2.29 1.16 -1.76 -0.05 -1.83 -1.0 -0.25 0.07 -2.35 -1.38 1.75 -1.97 -1.99 -0.03 -0.87 -5.8 -6.01 -5.99 -5.79 0.39 -3.98 1.39 3.02 0.97
-3.09 -2.96 1.64 1.41 - - -5.57 - -11.41 - - - 2.96 -3.59 - -7.85 3.11 -0.56 -5.25 -3.13 1.12 -3.42 -1.82 -0.14 0.37 0.29 -2.32 1.3 2.72 1.57 -0.25 0.34 0.13 -0.12 -0.64 0.19 -6.09 -4.77 -3.25 -5.0 -2.73 -0.85 -3.99 -4.02 0.62 -8.92 - 2.22 -7.49 - - -8.65 -10.75 -0.23 -5.66 - - 1.3
- - - 3.52 - - - - 1.18 - - - 4.61 - - - - - - - - - - - - - - - - - - - 0.84 - - - - - - - - 0.05 - - - - - - 4.07 - - - -2.29 - - - - -
- - - - - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.44 - 3.37 -0.66 - - - -3.29 - - - - 4.94 - - -2.17 0.45 -1.21 - 2.61 - - - - - - 0.63 - - - - -3.29 - - -0.02 - 0.33 - - - - -3.23 - - - - - - 1.13 - - - 0.63 - - - - -
-0.25 -1.94 -1.32 3.94 -2.27 - - -8.31 - - - - 4.42 -3.79 -3.69 -3.64 -2.23 -3.28 -1.53 -1.31 -2.1 -1.36 -1.52 -2.07 -2.32 -1.96 -2.53 -3.74 -2.73 -2.17 -1.05 -1.91 -3.18 - -2.9 -3.24 -2.01 -3.01 -0.51 -0.69 -2.52 -1.61 -0.91 - -0.98 -1.9 -6.77 -0.94 3.25 -2.67 -1.87 -3.75 -1.48 -2.3 -3.42 -3.0 - -
- - -5.77 3.91 -4.9 - - - - - - - -3.37 -0.76 -1.41 -1.44 4.21 -0.48 - -5.66 -3.38 -2.5 -3.04 -3.09 -2.19 -2.65 -0.97 -2.08 -3.47 -1.64 -1.31 -1.62 -2.16 - -2.04 -3.09 - -4.88 - -4.54 -2.89 -3.19 -3.9 - -4.05 -2.94 - -0.59 -0.89 - -3.48 -5.86 -3.0 -1.11 2.65 2.82 -5.51 1.62
-6.16 -5.38 - 4.81 -6.61 - - - - - - - -4.8 -5.89 - -7.22 4.9 -6.01 - - - - - - -8.6 - - - - - - - - - - - - - - - - - - - - - - - -6.69 - - - -10.73 -7.24 -4.19 -5.78 - -
- - - - - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- -2.35 3.88 0.82 - - - - -5.49 -5.06 -4.9 -3.95 5.17 -4.38 - - 0.01 1.51 - - - - - - - - - - - - -2.89 - - 0.05 - - - - - - - - - - - - - - -3.51 - - - - - - - - -
-5.54 - -6.8 -0.44 -6.0 - - - - - - -8.57 -4.6 0.63 -4.68 -3.51 5.79 -7.49 -5.14 - -7.38 - -7.33 -8.65 - -4.55 -5.06 -5.56 - - -6.29 -7.27 - - - - - - - - - -7.05 - - -5.07 -5.96 -8.27 - -4.48 -5.56 - - -5.57 - - - - -6.47
- - - 3.24 - - - -0.77 - - - - 4.86 - - - - - - - - - - - - - 1.32 - - - - 0.76 - - - - - - - - - -0.36 - - - - - - 3.79 - - - -2.74 - - - - -
1.1 2.08 3.31 - 2.13 - - - -2.14 - - -2.06 4.42 - - - -0.62 - - - - - - -2.0 - - - 0.69 - 0.2 2.86 0.58 - - - - - - - - - - - - - - - - 0.42 - 0.75 - -3.44 - - - - -
- - - - - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.44 -1.48 2.24 4.06 2.19 -0.91 - -5.72 -4.21 - - - 4.52 - - -4.25 -0.19 0.27 - - - - - - - - -3.83 - - - -3.18 -3.54 - - - - - - - - - - - - - - - - -1.68 - - - - - - - - -
- - - - - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.34 0.34 3.24 -1.34 -2.23 - - -7.59 - - - - 4.21 -0.51 -4.41 -2.58 2.29 0.65 2.39 -1.77 -3.2 -3.22 -3.62 -3.46 -4.87 -2.33 -2.05 -2.46 -5.63 -2.84 -1.59 -2.81 -4.97 -2.11 -2.3 0.22 -2.56 -3.98 -2.5 -5.15 - -1.09 -4.36 -1.88 0.69 -2.47 -5.37 -2.93 1.64 -1.76 -0.88 -0.39 0.02 -1.58 - -5.08 -3.93 -3.9
- - - - - - - - - - - - 5.79 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.42 - - - - -
-4.61 -6.7 -1.39 -2.1 -6.18 - - - -9.79 - - - -1.52 -0.14 0.15 -1.08 5.17 2.85 -4.54 -4.15 -0.75 - -1.65 -1.57 -1.72 -3.59 -6.0 -0.62 -0.02 -0.2 -2.35 -2.08 -2.26 -4.3 -3.82 -4.62 - -7.44 - - -5.1 -7.44 -6.11 - - -2.1 -1.71 1.91 -4.37 -7.71 -6.7 -1.7 -0.98 -0.66 -5.22 -7.36 -5.22 -2.44
- 1.09 -4.87 2.19 - -4.19 -4.36 - -7.16 - - - -2.65 -0.21 - -5.71 3.68 -1.02 - - -1.8 - -3.77 -2.76 -2.46 -3.95 -2.97 -2.64 -1.08 -0.23 -2.36 -2.75 -3.16 - -0.75 -3.47 1.8 -1.34 1.76 2.67 -0.7 1.73 2.28 2.42 -0.38 - -1.69 - -1.46 - -3.85 -0.64 1.71 -3.48 - - - -
- - -5.67 -3.87 - - - - - - - - -7.31 -3.85 -8.57 -6.79 5.45 3.39 - - -6.26 - -7.05 -8.14 -5.64 -6.44 - -4.54 -4.82 -3.65 -4.54 -2.6 -1.46 0.55 0.31 -5.44 - -7.45 - - - -8.53 - - - - - - -8.86 - - - - - - - - -
-2.27 -0.57 2.48 2.11 -5.74 - - -7.95 -10.25 - - -8.74 4.03 0.1 -0.81 -1.15 -1.92 -1.83 1.92 1.19 -0.41 -3.35 -0.5 -0.51 -0.2 -0.61 0.07 -0.0 -1.0 -0.58 1.3 0.26 -0.59 -1.03 -2.81 -4.55 -4.21 -5.16 -3.74 -3.4 -3.74 -3.51 -4.11 -3.7 -3.21 -2.48 -1.31 -0.33 0.58 -3.01 -3.47 -2.67 -0.5 0.42 -1.13 -4.27 1.68 -1.19
3.51 1.74 2.19 2.31 2.08 -1.92 0.6 -1.17 -1.14 -1.21 -1.23 -1.38 2.5 2.29 2.12 1.99 2.18 0.0 -4.43 -5.27 -7.15 - -7.6 -7.21 -6.71 -8.28 -10.19 -6.47 -6.06 -5.65 -5.89 -4.32 -2.33 -4.84 -0.97 -6.23 -6.3 -6.79 - -6.16 -7.5 -7.28 -6.85 -5.41 - -6.64 -8.64 -5.74 -4.99 -6.09 -5.74 -8.55 -6.8 -3.94 -7.27 -7.95 - -7.81
-5.64 -3.16 0.13 -2.31 -4.59 - - - - - - - 0.86 -2.61 -5.13 -3.48 2.04 -0.74 -0.68 -0.31 -1.71 -0.99 -1.37 -1.7 -2.57 -2.6 -4.73 -0.86 -3.47 -0.81 -0.03 -0.83 -2.12 -5.33 -4.19 -3.42 2.07 1.66 2.22 2.54 0.72 1.92 2.45 2.4 -1.21 -0.56 0.09 -6.17 -6.93 -0.74 -2.03 1.56 0.32 -9.12 -0.36 0.32 -5.33 -
2.33 -1.81 3.98 - - - - - - - - - 4.97 -4.58 - - 0.49 1.77 - - -3.31 - -2.63 -3.3 -4.5 - - - - - -3.79 - - - - - - - - - - - - - - - - - -4.02 - - - -5.13 - -2.51 - - -
- - 2.99 - - - -1.08 - - - - - 5.45 - - - -1.35 -2.08 - - - - - -3.33 - - - - - - 0.61 -0.4 -2.89 1.38 - - - - - - - - - - - - - - - - - - - - - - - -
-3.98 -4.68 -0.48 -0.45 - - - -10.28 -8.99 - - - 1.41 3.27 1.88 1.01 4.81 1.44 -5.0 -2.23 -1.85 - -5.03 -4.5 -3.41 -6.45 -5.61 -3.05 -0.63 -2.35 -4.5 -3.6 -2.61 -3.1 -3.2 -3.93 -4.55 -3.6 -2.9 -6.0 - -4.33 - -3.44 -3.99 -3.04 -5.94 1.3 -5.82 -4.49 -3.74 -5.02 -3.79 -1.7 -4.14 -5.89 -4.59 0.67
-6.35 -8.15 -9.02 3.45 -7.71 - -7.34 -7.28 -7.41 - - - -7.35 -3.89 - -9.25 5.55 -4.83 - -6.89 - - - -7.83 - - - - - - - -8.02 -7.3 - -6.09 - - - - - - - - - - - - - -8.46 - - - - -7.69 - - - -
- - 2.87 -0.21 -0.85 - - -4.16 - - - - 5.41 - - - - -1.53 - - -2.37 - - - -2.64 - - - -2.02 -1.53 - 0.27 -0.83 - 0.83 - - - - - - - - - - - - - -2.54 - - - -5.7 - - - - 0.74
- - - - - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.