Heatmap: Cluster_116 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.73 -0.59 -0.65 -0.88 -0.86 -1.49 -0.96 -0.19 -0.79 -0.1 0.42 0.53 0.91 -0.57 -0.13 0.05 -0.84 0.38 -0.31 -1.1 -1.76 -2.4 1.78 0.92 0.47 0.12
0.34 -0.94 -0.85 -1.07 -1.74 -2.21 -1.3 -0.52 0.25 0.83 1.23 1.36 0.8 -1.19 -2.31 -1.27 -0.68 -1.08 -2.76 -0.72 0.06 -0.57 1.15 0.9 0.36 0.97
1.5 0.99 0.23 -0.29 -0.3 -1.6 -0.22 -0.27 -0.63 -0.28 -0.18 0.36 1.34 -1.4 -2.89 -1.39 -1.87 -0.69 -1.66 -1.68 -1.58 -0.11 1.04 1.0 0.68 -0.22
1.15 0.2 0.4 0.31 -0.38 -1.04 -0.34 0.04 -0.85 -0.21 0.28 0.88 1.28 -1.23 -1.41 -0.61 -1.68 -0.26 -0.85 -1.69 -2.99 -1.31 0.66 0.19 1.18 0.16
1.59 1.21 0.54 0.13 -1.08 -1.71 -0.54 -0.75 -1.16 -0.14 -0.75 0.95 1.67 -3.5 -0.77 -2.54 -2.28 -1.64 -4.57 -4.88 -1.61 -0.43 1.72 0.74 -0.61 -0.19
0.64 -0.52 -1.47 -0.12 0.11 -1.27 0.08 -0.21 0.24 0.33 0.67 0.42 1.2 -1.67 -1.06 -0.25 -1.08 0.04 -0.47 -0.62 -1.73 1.08 0.7 0.15 -0.11 -0.3
0.78 - -0.13 2.07 1.03 -0.38 -0.56 0.19 0.76 -0.23 1.36 0.54 0.04 - - - -2.49 -1.88 -2.07 -2.07 - -1.39 1.18 -1.23 1.4 -1.69
0.91 -0.35 -0.35 -0.12 -0.44 -1.54 -0.77 -0.61 -0.51 0.47 0.9 1.16 0.7 0.28 -0.57 -0.59 -0.74 -1.13 -0.6 -0.58 -1.06 -0.74 0.54 0.59 0.44 0.21
1.17 -0.99 -2.24 -2.94 -3.3 -3.12 -1.27 -0.27 0.27 0.85 1.41 1.58 1.25 0.1 -2.11 -0.99 -1.63 -0.45 -1.24 -0.96 -2.52 -1.0 1.07 0.55 0.12 0.35
0.93 0.3 -0.24 -0.13 -0.24 -0.77 -0.1 0.16 0.39 0.13 0.48 0.74 0.53 -1.62 -0.76 -1.63 -1.34 -0.03 -0.88 -1.1 -3.45 0.27 1.27 0.37 0.39 -0.36
1.79 0.36 0.12 -0.24 -1.11 -1.38 -0.71 -0.06 -2.44 -1.76 -0.89 -0.45 1.61 -0.42 -0.93 -1.28 -1.4 -1.08 -0.85 -0.7 -1.77 -0.98 1.03 -0.13 1.16 1.27
0.61 -0.72 -0.61 -0.52 -1.09 -1.62 -0.5 0.2 0.1 0.62 0.78 0.71 0.7 -0.23 -1.02 0.58 -0.35 -0.67 -0.71 -0.45 -0.81 -0.78 0.84 0.39 0.38 0.15
0.69 -0.64 -0.71 -0.39 -0.89 -1.41 -0.46 0.29 0.31 0.6 0.9 0.83 0.96 -0.58 -1.2 0.07 -0.78 -1.01 -0.87 -0.78 -0.93 -0.67 0.83 0.51 0.43 0.12
0.64 0.15 -0.14 0.04 0.09 -0.25 -0.03 0.22 0.12 0.25 0.41 0.58 0.66 -0.93 -0.54 -0.69 -0.57 -0.21 -0.03 -0.49 -1.19 0.36 0.42 0.2 -0.2 -0.92
0.96 -0.99 -1.34 0.5 -0.26 -1.08 -1.66 -0.25 0.05 0.74 0.74 0.85 0.29 -1.76 -2.03 -2.57 -1.25 -0.73 -1.23 -3.13 -0.88 -0.79 1.46 1.26 1.07 0.31
-0.2 -0.81 -1.65 0.9 0.96 -0.44 0.74 0.9 0.4 0.72 0.88 0.95 0.45 -2.78 -3.06 -2.16 -2.76 -0.89 -1.01 -3.24 -1.64 0.15 0.64 0.8 -0.53 -0.22
0.7 -1.18 - - -1.13 - - -0.43 0.25 0.18 1.48 -0.23 0.67 - -1.41 - - -0.91 0.96 - -0.32 0.89 2.23 0.44 1.34 0.12
0.93 -0.1 -0.65 -0.48 -0.63 -0.95 -0.14 0.11 0.37 0.35 0.55 0.44 0.69 -1.02 -0.59 -1.14 -0.47 0.08 -0.33 -0.64 -1.37 0.23 0.92 0.39 0.31 -0.28
1.24 -0.14 -0.11 0.03 -0.32 -0.45 0.03 0.27 -0.2 0.11 0.41 0.74 1.3 -2.0 -1.13 -2.12 -1.01 -0.5 -0.46 -0.01 -0.96 -1.62 0.15 0.6 0.12 0.29
1.39 0.24 -0.38 -1.21 -1.7 -1.69 -0.77 -0.24 0.14 0.38 0.77 1.0 1.01 -0.63 -0.36 -0.63 -0.6 -0.74 -0.83 -1.06 -1.07 -0.29 0.74 0.47 0.24 -0.11
1.68 0.7 0.39 0.36 -1.83 -3.0 -1.52 -0.06 -1.66 -1.29 -0.62 -0.73 1.37 -2.14 -2.44 -1.73 -2.36 -0.85 -1.81 -1.75 -1.06 -1.26 1.44 1.13 1.2 1.12
0.77 -0.74 -0.49 -0.49 -0.3 -0.37 0.15 0.2 0.0 -0.11 0.36 0.85 0.96 -0.5 -0.92 -0.4 -0.56 -0.13 -0.43 -0.35 -1.57 0.22 0.36 -0.06 0.47 0.29
0.92 0.61 0.45 0.19 -1.06 -0.94 -0.37 0.5 -0.04 -0.09 -0.04 0.39 0.58 -1.92 -1.48 -1.26 -0.87 -0.27 -0.44 -0.29 -2.51 -0.69 0.53 0.81 0.37 0.93
0.62 0.34 0.24 0.22 -0.28 -0.54 -0.26 -0.26 -0.73 -0.23 -0.01 0.62 0.65 -0.12 -0.94 -0.35 -1.19 -0.56 -0.15 -0.76 -0.64 -2.92 1.39 0.3 0.35 0.47
1.38 -0.6 -1.36 1.64 0.56 - -1.25 -0.38 0.21 -2.45 1.21 0.32 1.03 - - - - -0.95 -1.37 -2.74 -2.03 0.9 1.91 -0.76 -0.42 0.44
0.79 -0.04 -0.73 -0.36 -0.62 -1.07 -0.73 -0.68 0.41 0.21 0.48 0.43 1.42 -1.21 -0.68 -0.78 -0.56 -0.09 -0.15 -0.47 -1.49 0.13 0.66 0.51 0.49 -0.14
0.64 0.12 -0.83 -0.41 0.12 0.25 0.55 0.46 -0.03 0.43 0.54 0.44 0.73 -0.87 -1.71 -1.66 -1.18 -0.96 -0.86 -1.04 -2.07 -0.17 1.21 -0.08 0.55 0.17
1.22 0.38 0.41 -0.04 -1.63 -1.74 -0.49 0.36 -0.31 0.14 0.36 0.57 1.34 -1.53 -0.94 -1.54 -1.07 -0.8 -0.84 -0.72 -2.05 -0.84 0.85 0.39 0.42 0.66
0.86 0.23 -0.09 -0.08 -0.35 -0.88 -0.38 -0.2 -0.28 0.1 0.31 0.39 0.67 -0.94 -0.97 -1.11 0.21 -0.13 -0.54 -0.48 -2.32 0.49 0.79 0.44 0.43 0.16
0.95 -0.38 -0.32 -0.17 -0.25 -0.42 -0.08 0.17 -0.28 -0.08 0.3 0.64 1.26 -0.53 -0.72 -0.59 -0.83 -0.42 -0.49 -0.77 -1.44 -1.25 0.92 0.07 0.61 0.22
0.94 0.37 -0.1 -0.09 -0.7 -1.1 -0.36 -0.18 -0.53 -0.43 0.01 0.03 1.01 -1.26 1.12 -0.94 -1.22 -0.99 -1.26 -1.29 -0.77 -0.02 1.37 -0.3 0.96 -0.12
1.56 0.44 -0.77 0.27 0.25 -0.74 -0.25 0.28 -0.37 -0.26 0.38 -0.06 1.24 -1.61 -1.67 -1.89 -1.81 -0.52 -0.71 -1.78 -3.23 -1.67 1.45 0.26 0.58 0.23
1.02 0.29 -0.16 0.55 -0.19 -0.64 -0.35 -0.12 0.03 -0.2 0.57 0.16 0.42 -1.88 -1.23 -1.06 -0.87 -0.14 -0.47 -0.69 -0.66 0.54 1.0 0.58 0.07 -0.45
1.13 -0.11 -0.21 0.23 -0.81 -1.5 -0.88 -0.15 0.0 -0.17 0.42 0.01 0.08 -2.35 -1.11 -2.4 -1.46 -0.95 -0.85 -1.16 0.21 1.09 1.47 1.42 -0.17 -0.25
1.41 -0.2 -0.41 -0.35 -1.37 -2.01 -1.12 -0.69 -0.52 0.16 0.86 1.05 1.24 -1.21 -1.04 -1.26 -0.93 -0.13 -0.29 -0.77 -2.37 -2.83 1.14 0.79 0.83 -0.1
1.11 0.21 -0.28 -0.54 -1.03 -1.36 -0.38 0.04 -0.21 0.05 0.49 0.51 1.04 -1.27 -1.4 -0.98 -0.98 -0.18 -0.62 -0.75 -0.71 0.31 1.02 0.36 0.61 0.13
1.25 -0.37 - -0.74 -0.2 -0.11 0.25 0.58 -0.19 -0.72 -0.23 0.21 1.16 -1.96 -2.96 -0.79 - -0.06 -0.21 -1.83 -1.06 -0.67 1.81 -1.5 1.58 0.01
1.35 0.41 0.13 0.27 -0.63 -1.1 -0.32 0.34 -0.31 -0.46 0.26 0.47 1.24 -0.74 -1.23 -0.88 -1.81 -1.04 -1.54 -2.08 -1.73 -0.15 1.19 0.12 0.6 0.21
1.17 -0.07 -1.22 0.39 -1.2 -1.33 -2.95 -0.44 -0.29 -0.54 0.82 0.01 1.07 -3.72 -3.42 -3.51 -3.4 -2.23 -1.79 -3.23 0.0 1.45 1.36 1.19 1.05 0.46
1.01 -0.62 -0.02 0.94 0.29 -0.36 -0.05 0.69 0.52 1.49 0.92 0.74 0.94 -3.01 -4.1 -1.57 -3.8 -1.12 -0.77 -2.8 - -0.84 0.95 -3.4 0.27 -0.89
1.26 -0.41 -1.34 -0.04 -0.42 -0.71 0.18 0.7 -0.07 0.2 0.38 0.02 1.14 -1.78 -1.72 -2.33 -1.9 -0.55 -0.44 -1.25 -2.71 0.37 1.45 0.67 -0.09 0.15
1.18 0.55 -0.16 -0.91 -2.14 -2.53 -0.88 -0.08 -0.76 -0.14 0.62 1.03 1.59 -1.9 -1.76 -1.78 -1.92 -0.02 -0.49 -0.76 -3.26 -1.94 0.7 0.78 1.26 0.42
1.17 -0.2 -0.77 -0.16 0.19 0.07 0.01 -0.06 -0.26 -0.14 -0.01 -0.1 1.17 -0.57 0.38 -0.76 -1.19 -0.98 -0.73 -1.81 -0.88 -0.3 1.04 -0.32 0.72 0.08
0.67 0.32 0.25 0.35 0.14 -0.18 -0.11 0.07 -0.15 -0.2 0.13 0.29 0.76 -0.26 -0.48 -0.32 -0.72 -0.46 -0.42 -0.7 -0.75 -0.94 0.79 -0.56 0.4 0.1
0.7 0.03 -0.52 -0.3 -0.59 -0.52 -0.35 -0.05 0.26 0.13 0.35 0.54 0.66 0.17 0.09 0.01 -0.93 -0.37 -0.07 -0.8 -1.2 -1.3 0.59 0.18 0.53 0.24
0.81 0.09 0.21 -0.64 -2.0 -2.05 -0.26 0.44 -1.16 -0.11 0.32 0.71 1.45 -0.8 -1.25 -1.02 -0.57 -0.84 -0.82 -0.45 -0.25 -2.08 0.2 0.21 0.89 1.29
0.71 -0.18 -0.27 -0.2 -1.19 -2.39 -1.12 -0.32 -0.24 0.79 1.25 1.27 1.35 0.03 -0.76 -0.6 -1.1 -1.19 -1.46 -1.31 -1.18 -1.58 0.79 0.48 -0.19 0.34
0.62 -0.0 0.09 0.69 0.59 0.2 0.28 0.39 0.43 0.47 0.53 0.24 0.55 -1.45 -1.38 -1.27 -1.05 -1.06 -0.3 -1.42 -2.91 -1.39 0.61 0.18 0.41 -0.03
0.64 1.54 -0.28 0.42 -0.75 -2.15 -2.08 -3.4 -1.3 -1.35 -1.3 -0.61 1.14 -1.28 -0.43 0.44 0.14 -0.4 -1.95 -1.1 -1.8 -0.98 1.93 0.97 0.41 0.23
1.66 0.61 0.45 0.38 0.09 -0.91 0.39 -0.74 -1.08 -1.37 0.15 0.46 0.92 -2.45 -0.82 - -3.05 -0.47 -1.86 -1.07 -1.64 -3.68 1.82 0.79 0.34 -0.65
1.58 -0.64 -1.15 -0.71 -0.5 -0.68 0.18 0.31 0.2 -0.02 0.17 -0.04 0.89 -3.02 -1.94 -2.33 -1.79 -0.66 -0.75 -1.54 -0.73 -0.58 1.93 0.13 0.97 -0.09
1.65 1.09 -0.59 -1.11 -2.14 -1.69 -0.63 -0.78 -1.32 -2.2 -1.38 -0.75 1.52 -1.38 -1.01 -2.21 -1.44 0.68 0.23 -3.16 -0.94 1.01 0.08 1.57 0.42 0.16
1.36 1.17 0.51 0.84 -0.15 -1.66 -1.25 -0.74 -0.52 -0.18 0.57 0.79 0.97 -1.52 -3.12 -1.88 -1.71 -3.28 -1.58 -1.7 -1.75 -0.08 1.61 0.19 -0.41 0.02
1.34 0.53 -0.44 -0.41 -0.4 -0.69 0.34 0.06 -0.08 -0.2 0.22 -0.26 0.98 -0.51 -0.51 -0.61 -1.06 -0.81 -0.77 -1.24 -2.21 -1.37 0.38 0.59 1.14 0.4
1.12 -0.28 -0.74 -0.77 -1.03 -1.0 -0.05 0.08 -0.38 0.54 0.71 1.02 1.19 0.18 -1.49 -0.39 -1.62 -1.3 -1.11 -1.24 -0.79 -1.22 0.97 0.33 0.53 0.14
0.95 0.44 0.25 -0.1 -0.85 -1.15 -0.9 -0.33 -0.18 0.16 0.6 0.51 0.83 -1.32 -1.16 -1.08 -0.62 0.29 -0.45 -0.18 -1.84 -0.02 0.8 0.11 0.73 -0.04
1.13 0.28 -0.22 0.66 -0.25 -1.15 -0.78 -0.06 -0.3 -0.75 0.07 -0.08 0.89 -1.6 -0.84 -1.3 -1.19 0.24 0.24 -1.8 -0.14 0.85 0.95 -0.31 0.28 0.07
1.89 - -2.25 1.43 -0.29 -2.47 - 0.66 -0.49 -0.98 0.68 - -2.04 - - - - -2.07 -1.83 - 0.32 -1.24 2.86 0.45 0.5 0.59

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.