Heatmap: Cluster_6 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
AT1G02970 (WEE1)
3.16 0.53 -1.79 -0.36 -0.95 -1.16 -0.55 -1.4 -0.49 -1.94 -0.36 -6.05 0.42 -0.29 -0.71 -1.9 -2.1 -0.82 -1.45 0.72 -2.45 -0.25 0.87 -0.19 -6.42 -1.59 -7.08 2.41 0.22 - 0.97 -0.58 -1.0 -1.47 1.75 -0.31 -5.36 -0.08 -3.99 -2.52 - -2.23 0.08 0.94 0.49 0.42 -4.48 0.57
2.63 -0.55 -0.47 2.12 0.85 -0.41 2.52 - - -6.21 - - - -1.12 -0.8 -1.19 -1.12 -0.79 0.31 -1.75 -2.81 -1.13 -1.53 1.33 -2.93 0.14 1.16 -1.17 1.72 -5.14 0.38 -1.92 -1.21 -0.3 -0.46 0.46 1.29 -0.14 -1.85 - - 1.3 -2.21 -2.2 0.51 - - -2.59
AT1G20000 (TAF11b)
3.47 -1.71 3.36 - - - 1.0 - 0.86 - - 0.88 - - - - - - 0.62 -2.29 - - - -2.22 - - - - 4.03 - -2.41 - - -2.03 - - -0.21 -4.37 - 0.0 - - - - - - -5.47 -
5.01 -0.36 0.14 - - 0.91 - - - - - -0.59 - -1.84 1.26 - 0.11 - 0.02 -1.06 - - - -5.32 - - - - 2.41 - -0.6 - - - - - - -4.94 - - - - - - - - - -
AT1G34290 (RLP5)
4.24 - 4.44 - 2.16 1.55 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.47 0.77 1.82 2.0 1.28 -0.83 2.0 - - -5.2 -3.45 - -3.57 -0.32 0.51 -0.67 -1.19 -0.4 -0.35 0.68 -0.26 0.44 0.85 -1.0 -1.51 -1.16 -1.55 0.59 0.07 -1.95 0.5 0.16 -0.99 -1.71 0.75 -0.78 -0.5 -0.62 -1.89 -6.68 -1.86 -2.06 -1.8 0.69 -0.72 - - -0.18
1.79 -3.62 -4.85 -4.85 -4.86 -3.98 -5.7 -3.56 -6.94 -6.22 -5.59 -8.26 -2.61 -3.61 -2.94 -3.84 -5.15 -4.63 -4.67 -2.01 -0.82 -0.11 -0.87 -1.16 -1.22 -1.85 -1.16 -2.36 3.73 -1.49 -4.45 -0.43 -2.69 -0.96 -4.82 2.94 1.56 -1.04 1.05 2.62 1.36 0.18 -0.85 -4.42 -0.87 -10.5 - -2.78
4.07 -3.06 2.5 1.95 1.37 -0.67 2.45 -1.93 - -1.97 -3.19 -2.09 -0.09 - -1.02 - - - 0.88 -5.69 - - - -1.83 - -2.04 - - 3.03 - -5.54 - - - - - - - - - - - - - - - - -
3.41 -1.94 2.36 -1.76 3.35 3.51 -1.83 0.08 -5.07 -0.89 -5.75 - -4.81 -2.92 -1.82 -3.02 -4.9 -2.59 -1.83 -2.26 - -1.95 -0.98 -3.31 - -5.2 -4.83 -2.26 -2.94 -7.47 -1.49 -1.32 -2.19 -3.33 -2.01 -3.7 -2.25 -2.5 -4.27 - - -4.7 -0.46 0.1 -0.61 - - 0.41
AT1G80390 (IAA15)
3.87 -1.07 0.89 3.22 1.62 0.26 3.51 - - - - - - - -0.48 -0.77 - - - -2.52 - -0.72 0.93 -3.32 - -0.94 - -2.43 -2.95 - -4.99 -3.16 -2.44 -2.68 -5.16 - - -1.24 -3.62 - - - - - -2.46 - - -
2.41 0.8 1.07 1.05 0.45 -0.1 0.99 -3.59 -3.25 -6.19 -5.08 - -7.22 0.14 0.91 -0.28 -0.31 -0.41 -1.09 0.84 0.09 0.23 0.62 -0.42 -0.81 -0.6 -0.7 0.54 0.79 -1.72 0.7 0.42 -0.5 -0.48 0.69 -0.72 -0.2 -0.42 -0.95 -2.5 -1.21 -0.46 -0.28 0.75 0.24 -7.75 -6.6 0.01
5.42 -9.61 -2.69 -4.27 -3.95 -5.22 -6.2 -6.35 - -5.6 - - - -4.06 - - - - -3.29 -4.59 - - - -9.77 -4.61 - 0.24 - -5.33 -7.59 - - -3.95 -1.79 - -2.03 -1.62 -5.93 -4.74 0.09 - - - - 0.42 - - -
3.48 1.7 0.27 - - 0.08 - - - - - 1.39 - 0.33 - - - - - -0.97 - 1.29 2.03 0.57 - 1.0 - - 0.03 - 0.86 1.32 - 0.98 1.11 0.46 - 0.09 -2.83 - - 1.46 - - 0.56 - - -0.63
4.02 -3.8 1.52 0.82 0.69 - 0.67 - -1.36 - - -2.22 - - - - -2.23 -0.49 -0.8 - - - - - - - -2.16 - 2.12 -2.81 -4.48 - - - - -2.02 -1.92 -0.64 - 3.9 - -0.03 - - - - - -
2.91 0.63 0.27 0.44 0.6 0.82 0.89 -3.72 -4.02 -5.55 -3.64 -8.09 - -0.13 0.35 -1.05 -0.49 0.08 -1.88 0.74 0.52 0.46 1.11 -0.44 - -0.47 -5.26 -0.01 1.99 -5.65 0.63 0.16 -0.96 -0.94 0.59 0.57 -3.06 -0.64 -1.65 - - -1.94 -0.36 0.82 0.68 - - 0.02
3.78 -3.75 2.4 1.46 2.76 3.0 1.7 0.67 -0.95 0.3 -1.2 -1.98 -0.92 -6.01 -2.71 - - - -0.81 -5.73 - - - -2.94 - -3.35 - -2.86 -0.62 - -5.86 -3.47 -4.15 -3.25 -5.45 - - -5.1 - - - -0.33 -2.7 - -1.17 - - -5.28
3.37 -0.02 2.76 2.61 2.88 -2.52 3.01 - - -2.93 - -1.19 -2.74 -3.22 - - - -1.77 -1.59 -2.21 - - -2.01 -3.0 - -3.52 -3.16 - 0.57 -4.84 -5.4 -3.23 -3.06 - -2.86 - -1.43 -1.92 1.54 -1.41 - - -2.95 - - - - -
2.91 -0.4 1.13 1.54 0.6 -2.55 1.09 -9.38 -7.44 -7.38 -5.72 -9.27 - -0.38 0.09 -0.26 -0.32 -0.21 -1.91 0.25 -1.13 -0.0 0.57 -1.09 -1.12 -1.04 -0.86 -0.38 2.58 -1.28 -0.57 -0.21 -1.04 -0.8 0.15 -0.47 1.41 -0.06 -0.95 -4.77 -5.1 -1.42 -0.92 0.44 -0.08 - -2.34 -0.14
AT3G10600 (CAT7)
3.97 -1.01 1.25 -0.9 0.19 -1.53 -1.71 -2.11 -5.38 -2.19 -5.05 3.19 1.64 -3.46 -2.94 -2.74 -5.08 -1.77 0.46 -1.11 0.44 -2.29 -3.19 -2.99 - -4.89 -6.13 -2.72 0.54 -6.78 -2.42 -3.49 -3.05 -3.15 -0.97 -5.01 -2.52 -2.71 -2.16 - - -0.76 -5.94 0.28 0.39 - 1.57 -0.61
4.96 -1.0 -0.27 - - - -1.16 - - -2.31 - 1.54 3.34 -2.26 - - - - - -4.08 - - - -5.31 - -1.88 - - -1.1 - -1.01 - - - -2.02 - - -2.92 - - - - - - - - - -
4.93 -2.44 1.32 2.33 0.58 - 2.4 - - - -0.77 -1.52 - - - - - - 0.55 -3.13 - - - -6.19 - - - - -1.11 - - - - - - - - - - - - - - - - - - -
AT3G24340 (chr40)
3.71 1.56 -0.37 -0.48 -0.73 -1.84 -0.5 -1.93 -3.0 -3.34 -3.0 0.66 -2.13 -0.69 0.2 -4.54 -5.75 -4.2 -1.57 0.97 -4.08 -2.8 -1.87 0.09 -4.53 -1.24 -2.48 2.97 2.18 -3.41 1.75 -2.23 -3.11 -3.82 1.36 -2.96 -3.45 -1.75 -5.98 -5.24 -5.96 -4.28 -4.94 -1.63 -3.08 - -4.3 -2.98
2.97 -4.09 -2.28 3.56 -0.51 -1.53 2.61 - - - -1.93 -3.24 4.2 -4.56 - - - - -1.01 -4.07 - - - -4.09 - -5.93 - - -3.17 - - - - -5.8 -4.93 -2.79 0.23 -5.75 -4.6 - - - - - - - - -
1.53 0.27 1.51 1.7 1.25 0.41 1.51 -3.52 -3.41 -5.06 -4.22 -1.42 -3.76 -0.66 -0.31 -0.74 -0.81 -0.21 -1.57 -0.09 -1.6 -0.2 0.12 -0.47 0.09 -0.58 -0.77 0.25 2.24 -0.02 0.21 0.23 -0.19 -0.37 -0.0 -0.75 -0.28 -0.45 -0.24 -3.28 -1.55 -1.06 -0.67 0.6 0.27 -1.23 -11.4 -0.15
4.11 1.14 0.95 -0.35 -2.26 - 1.81 -0.68 -0.87 -2.69 -1.56 -1.76 -3.02 -1.17 1.15 0.24 1.04 0.83 -1.79 -0.51 - 0.43 -1.19 -2.92 - -2.21 - - -1.53 - -0.92 - -0.53 -2.6 0.04 1.92 -2.06 0.46 -2.63 - - -1.17 - - -1.08 - - -
3.19 -0.23 -1.2 -2.46 -1.79 -4.43 -2.98 -10.6 - -9.21 - -9.15 -9.78 -0.9 -1.61 -0.58 -0.96 -1.63 -2.98 0.46 -1.72 -0.52 0.28 0.08 -4.41 -0.04 -2.6 0.97 3.59 -5.33 -0.55 -0.91 -1.63 -1.35 0.41 0.57 0.38 -0.35 0.53 0.06 -2.78 -3.23 -0.96 0.1 -0.88 0.77 -1.65 -0.29
3.74 -0.37 3.13 1.65 2.15 -0.03 1.66 -0.65 - - - - - - -0.07 - - - 3.1 -4.82 - - - - - - - - - - 1.57 - - - - - - -5.55 - - - - - - - - - -2.27
1.48 -0.92 1.94 1.97 1.24 1.68 2.19 2.05 0.96 -0.62 -0.91 -3.04 -0.75 -1.23 0.83 -0.11 -4.6 -2.16 -0.38 -0.7 -2.2 -0.2 -0.29 -1.31 -6.48 -1.1 -1.71 -0.5 2.7 -4.37 -2.31 -0.19 -0.51 -1.09 -1.87 -1.98 -3.56 -1.4 -2.36 -3.32 - -4.07 -5.0 -5.4 - - - -5.55
4.45 0.21 0.93 - 2.06 0.28 0.66 - -2.72 - - - - -2.58 - -3.37 - - -4.3 0.69 -0.54 0.06 0.47 -2.61 - -2.89 -0.29 1.76 -1.62 - -1.18 -2.59 -2.21 -3.5 1.4 -0.04 0.03 -1.72 -4.15 -2.32 - - - - - - - -
2.04 0.49 0.41 0.34 0.5 -0.32 0.08 -3.2 -4.51 -4.9 -5.39 -7.31 -4.69 -0.54 0.34 0.01 0.17 -0.91 -1.45 0.59 -0.19 0.13 0.38 -0.04 -0.38 -0.17 0.23 -0.27 2.59 -0.96 0.16 0.69 -0.65 -0.8 -0.28 0.26 0.26 -0.14 -0.47 -0.74 -0.9 -0.58 0.06 0.61 -0.2 -1.53 -2.37 -0.28
4.67 -2.04 2.47 0.42 2.36 -0.99 0.14 - - -3.04 - -1.07 - -5.82 - - - - -1.85 -1.82 - - - -6.22 -2.04 -6.1 -2.64 - - - -3.52 0.84 -3.06 -0.25 -2.39 - - -4.67 -0.68 -4.07 -1.36 - -4.04 1.21 -3.02 - -2.97 -1.36
4.96 -1.06 - - 0.32 - - - - - - - 1.15 -1.11 - -2.19 - - -2.74 -3.41 - - - -0.72 - -0.94 -0.17 - -1.0 - - 0.08 -1.35 -2.07 - - - -2.29 -2.38 - - - -1.08 2.5 -0.08 - - -1.22
4.38 -0.21 - - - 4.23 - - - - - - - 0.61 - - - - - - - - - -0.87 - 2.13 - - - - - - - - - - - -0.81 -1.0 - - - - - - - - -
2.53 2.12 2.62 1.96 1.48 -0.78 1.93 -3.93 -2.97 -7.2 -3.35 -1.59 -6.47 -0.86 -0.79 -2.87 -5.11 -6.08 -1.56 1.79 -1.05 -2.71 -1.39 -1.91 0.1 -3.04 -2.9 0.74 -1.02 -0.35 1.6 -1.41 -3.35 -4.65 1.47 -5.03 -3.22 -2.3 -5.71 -0.29 - -5.62 -2.83 0.14 -2.53 - -10.73 -1.3
2.95 -0.97 1.27 1.4 1.28 0.96 1.67 -2.62 -3.45 -4.72 -1.38 - - -2.16 -2.01 -1.16 -2.16 -1.22 -2.2 -0.65 -0.53 -1.25 -2.05 -1.0 2.2 -1.26 -0.45 -2.96 -1.14 2.55 -1.11 -0.27 -1.95 -1.1 -1.76 -0.27 1.87 -0.08 0.39 - - - -2.99 -2.41 -1.4 - - -1.84
5.21 -1.52 - - -1.57 - -3.02 - - - - - - -0.59 -0.4 -2.24 -0.01 -3.38 -4.68 -5.74 - -1.91 -3.08 -3.02 - -1.31 - - 1.09 - - - -2.83 -2.34 -5.81 0.94 -2.95 -0.73 -2.73 - - -1.06 - -2.39 -0.97 - - -3.16
2.5 -5.74 0.85 3.57 1.56 -0.7 2.76 1.14 0.35 -0.03 -0.23 1.47 -1.7 - -3.49 - - -4.02 3.18 -6.16 - - - -2.75 - -4.64 - -4.44 -2.85 - -7.01 - - - - - - -8.05 -8.45 - - - - -2.3 - - - -3.68
1.94 0.11 1.02 1.2 1.59 -0.08 0.88 -6.0 -2.98 -2.93 -3.11 -2.91 -2.53 0.12 0.19 -0.39 0.11 0.05 -1.38 -0.61 -2.01 0.06 -0.58 -0.54 -0.42 -0.68 3.13 0.56 0.49 -2.16 -0.33 -2.68 -0.82 -1.04 -1.49 1.07 -0.77 -0.34 0.18 -0.67 - 0.44 -1.0 -2.2 -1.2 - - -2.96
5.09 -4.84 - - - - -1.94 - - - - - - - -0.5 - - - - - - - - - -1.98 - 3.66 - - - - - - - -3.45 - - -6.11 - - - - - - - - - -
3.82 -1.78 2.5 2.95 2.06 0.01 2.07 -4.38 -4.47 -4.59 - -6.22 - -4.22 - -4.05 -4.33 -2.59 1.17 -1.73 - - -3.06 -3.16 -1.64 -4.23 - 0.68 0.59 -3.91 -4.26 -3.02 - -4.15 -2.48 -3.13 - -4.73 -7.52 - - - -2.07 0.35 0.48 - - -0.88
AT5G39810 (AGL98)
2.81 -1.91 3.06 2.98 2.87 -0.32 0.38 - - 0.24 - -0.67 - - - - - - 0.39 -1.0 - - - -0.95 - -2.94 - -11.91 -1.1 -1.64 -1.22 - - - - - 2.64 -3.61 -0.73 - - - - - - - - 1.41
AT5G41200 (AGL75)
4.57 -2.36 2.11 1.84 1.59 -2.92 1.26 - - -5.77 -3.16 -4.31 1.44 - - - - -3.64 1.79 -2.85 - - - -5.7 -1.19 -6.32 1.59 -17.46 -1.36 -4.43 -6.56 - - -4.28 -6.39 - - - -6.06 - - -3.18 - - - - - -
3.35 1.31 -1.86 -3.05 -2.45 -7.12 -3.28 - - -9.6 - - - -0.19 0.62 -0.58 -0.86 -1.67 -2.42 1.24 -1.62 0.76 1.75 -0.62 -4.69 -1.15 -6.39 1.99 1.51 -4.82 0.84 -1.27 -0.19 -0.87 1.78 0.04 -4.91 0.08 -2.59 -2.13 -0.87 -2.28 -1.94 0.79 0.1 -1.32 - -0.06
4.47 -2.29 1.48 1.07 2.12 -0.14 2.35 -1.79 - -1.83 - - - -2.13 - -2.27 - - -1.38 -4.93 - -1.68 - -3.17 -1.51 -3.24 -1.37 -1.13 0.74 - - -3.44 -1.27 - 0.47 -1.23 -1.42 -3.42 -3.42 - - 1.34 - - - - -2.27 -
1.77 -0.26 1.62 1.72 1.5 1.66 1.74 -0.37 -2.09 -3.6 -4.2 -7.1 -0.62 -1.0 0.28 -0.63 -0.28 0.01 -0.86 -0.2 -0.25 -0.37 -0.03 -0.46 -2.56 -0.65 -1.63 0.26 2.34 -2.74 0.17 0.29 -1.09 -1.0 0.54 -0.83 -1.1 -1.11 -1.55 -4.06 - -2.77 -1.22 -0.36 -0.2 -2.03 -11.27 -0.7
2.62 -0.26 2.16 2.02 2.34 1.2 2.17 -3.46 -3.55 -5.03 -4.03 -1.85 -6.66 -1.03 -1.62 -1.12 -2.21 -1.36 -1.51 0.05 -2.8 -1.09 -0.52 -0.79 -4.53 -0.95 -2.62 -1.28 2.53 -6.27 -0.1 -0.57 -1.44 -1.54 -0.59 -1.21 -2.32 -0.79 -1.56 - - -1.0 -1.05 0.17 -0.3 - -8.84 -0.97
3.05 -0.09 -0.27 0.57 0.11 0.27 0.41 -1.45 -2.07 -5.16 -3.96 -1.93 -3.54 -0.04 1.42 -0.99 -0.06 -0.34 0.24 -0.2 0.29 -0.99 -0.36 -1.17 -2.05 -1.16 0.47 -0.32 2.51 -2.71 -0.69 -0.58 -1.26 -1.18 -0.63 -1.06 -0.91 -0.94 -1.3 -2.4 -1.6 -0.76 -0.1 -0.16 -0.23 1.06 -0.21 -0.55

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.