Heatmap: Cluster_155 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
-2.98 -4.01 -3.02 -1.85 -3.51 -2.91 - -2.58 -4.16 -2.36 -0.67 -1.17 -3.83 -1.67 -1.48 -1.93 -0.74 0.15 - - -1.51 0.13 -3.63 -1.65 -0.83 2.33 1.44 -2.8 -0.26 -1.86 -4.56 -1.29 -0.55 0.38 1.47 2.08 0.82 0.94 1.39 0.1 1.39 1.43 1.55 0.94 1.64 -2.5 -4.4 1.15 1.04 - - - -0.01 2.5 -1.39 - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - -
- - - - - - - - - - - - 4.68 4.52 - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.25 - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - 5.64 - - - - - - - - - - - - - - - - - - - 3.05 - - - - - - - - - - - - - - - -
3.33 - - 2.89 - - 3.28 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.85 - - - - 0.96 - - - - - - - - - - - - - - - -
- - - - - - - - - - - - 3.0 2.41 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.39 - - - 1.48 - - - - -
-2.59 -2.89 -0.78 -2.21 -7.57 - - -10.59 - - - - -0.84 -0.55 -0.04 0.09 -0.32 -1.44 -2.46 -1.68 1.15 -0.36 0.75 0.92 1.17 -0.28 -0.03 0.9 1.41 1.09 1.0 1.25 1.45 1.39 1.05 0.4 0.16 0.17 -0.22 0.23 -0.37 0.04 0.81 0.77 0.16 -0.25 -0.51 -0.74 -0.3 -1.15 0.6 -1.28 -1.83 -0.64 0.01 -0.08 -0.42 0.95
-1.49 1.79 -4.3 -1.94 -1.42 - -5.12 -8.65 -4.88 -9.99 -7.88 -5.07 -7.05 -7.22 -6.36 -7.02 -0.14 -5.14 -2.6 1.33 -2.52 -4.49 -6.39 -3.77 -1.72 2.07 0.49 -3.51 -0.37 -1.9 -2.56 -0.62 1.62 1.31 2.99 0.6 1.48 1.14 0.9 1.09 0.64 0.99 0.96 1.42 0.54 0.44 -4.12 -0.15 2.14 -3.17 -5.71 -4.47 -5.31 -2.12 -1.74 -2.37 -3.57 -2.13
-1.29 -0.79 -0.3 0.92 -0.84 -2.25 -0.14 -2.39 -1.78 -2.01 -2.05 -1.76 -0.81 -1.38 -0.74 -0.67 0.56 0.76 -1.42 -0.7 -0.4 0.48 -1.15 -0.64 -0.4 0.27 1.78 -0.3 0.51 -0.28 -1.05 -0.49 -0.1 -0.06 0.85 0.15 -0.09 0.29 0.19 0.01 0.5 0.31 -0.11 0.12 0.64 0.4 -1.22 2.07 0.4 -0.59 -1.37 -2.18 -0.8 1.92 0.92 -1.7 -2.6 0.64
- 1.05 - 0.52 - 0.01 - 3.14 3.73 1.71 2.49 2.49 -0.23 0.01 - 0.29 - -2.17 - - - - - - - - - - - - - - - - - - - 0.55 - - 3.49 -1.67 - - - - - - -1.26 - - - -2.65 - - - - -
0.7 1.74 0.15 -4.28 -5.78 - -8.55 -11.97 - - - - -0.83 -1.41 -1.02 -1.21 -0.81 0.06 1.03 1.39 0.5 -0.48 0.37 0.75 0.53 -0.79 0.42 0.26 0.05 0.19 -0.05 0.34 0.42 -0.24 -0.89 -1.14 -1.59 -1.04 -1.02 -2.05 -1.55 -1.65 -2.41 -2.31 -1.44 -0.13 -1.18 1.18 0.02 -0.8 -1.56 -1.09 -1.18 0.56 3.26 1.88 -0.93 0.82
- - - -0.03 3.26 - - -3.81 - - - - -0.58 -0.99 -1.22 -1.81 - - - - - 3.45 - - - - 2.79 - - - -1.39 - - - - - 0.89 -0.12 - 1.47 - 2.04 4.04 - - - - - 0.23 - - - -5.81 - - - - -
- - - 4.57 - - - - - - - - -0.03 - - - - - - - - - - - - - -0.04 - - - - - - - - - 3.78 - - 2.36 - 2.82 - - - - - 0.07 1.7 - - - - 1.08 - - - -
- - -3.36 4.51 -0.48 - - - - - - - -0.77 - - -3.93 - - - - -2.98 0.96 - - - - - - -2.09 - - - -0.25 - 1.11 - 0.51 - 1.6 0.64 - 1.04 3.83 1.64 - - - -1.54 1.09 - - -2.0 -3.71 - -1.89 - - -
- - -6.23 -0.46 -5.22 - - - - - - - -3.48 -7.46 - - -5.78 - - - - 1.9 - - - -6.16 -0.1 - - - -6.66 -7.12 -5.9 - -2.94 - 2.76 -0.44 2.54 2.78 -0.55 2.03 4.23 3.03 - - - - -1.98 - -5.28 - -4.63 -5.86 -3.95 - -5.82 -
-0.98 1.25 -1.91 - - - - -5.9 - -8.03 - - - - - - - -2.99 0.55 2.51 - 2.63 - - - - 1.94 - - - - - - 4.09 0.57 0.34 0.62 -2.24 0.48 2.47 -1.11 0.85 1.65 0.52 - - - - -0.33 - -0.57 - - -0.42 - - - -
-0.57 -2.32 -2.62 2.63 -0.12 - - -4.07 -2.82 -0.32 -0.47 -0.76 -2.22 - - - 1.2 -0.59 - -2.48 -1.99 -2.27 - -1.71 -4.01 0.08 -0.47 -2.39 -1.22 -0.58 -1.88 0.65 0.69 4.05 2.55 -0.54 0.25 0.95 0.34 0.73 - 0.64 -0.52 0.38 -0.62 -0.98 - 0.31 0.18 - - - -6.37 -0.82 - - - -
-2.61 1.73 0.57 -0.68 - - - - - - - - -1.98 - -4.08 -4.43 -1.26 1.14 - -1.79 0.98 4.85 -2.36 1.09 1.02 -1.97 2.59 -1.49 - - -0.84 0.06 -1.33 1.39 -0.94 - - - - - - - - - - - - - -0.05 - -2.14 - -0.22 -2.83 - - - -
0.54 1.24 0.36 1.09 -5.35 -5.08 -4.95 -5.11 -4.63 -5.29 -4.5 -6.16 1.48 1.01 0.6 -0.07 1.44 -0.41 0.02 -0.06 0.37 1.17 0.51 0.46 0.32 0.44 0.66 0.27 0.41 -0.0 0.37 0.49 0.25 -2.76 -0.05 -0.7 0.33 -0.25 -0.89 0.35 0.02 -0.3 0.32 -0.39 -0.58 -0.36 -3.54 0.41 1.37 0.14 0.01 -1.2 -0.05 -0.56 -2.89 -2.58 -1.71 -2.84
- - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - 5.54 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.54 - - - - - - - - - - - - - - - -
- - - 1.74 - - - - - - - - - 0.44 - 0.14 - - - - - - - - - - 3.54 - - - - - - - - - 3.69 - - - 4.73 0.12 - - - - - - - - - - - - - - - -
- - - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.54 -0.66 0.09 -4.19 -5.18 - -8.54 -11.77 - - - - -0.59 -0.64 -2.63 -2.28 -1.35 -1.19 -0.97 -0.41 -1.14 4.02 -1.2 -1.21 -1.55 -0.43 1.76 -1.0 -1.52 -1.29 -1.71 -1.09 -1.1 -2.44 -2.54 -2.78 0.29 0.55 0.76 1.07 1.27 0.31 -0.01 0.19 -0.7 -1.05 0.84 -0.18 2.08 -1.08 -1.09 -0.37 -0.55 0.26 -0.21 -2.37 -4.04 0.86
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.54 - - - - - - 5.12 - - - - - - - - -
-0.48 - - 4.69 - - - - -3.37 - - - 1.83 - - -1.67 - - - -0.5 - 3.68 - - - - - - - - - - - - - - - 0.34 - - - -2.59 2.96 - - - - - 2.23 - - - -4.59 - - - - -
-3.02 - -2.54 - - - - - - - - - - - - - - -2.33 - - -3.63 -3.3 -3.3 -3.9 -2.28 -0.87 -3.27 - -1.49 - -3.87 -0.57 1.21 3.13 3.62 1.81 2.17 0.85 0.63 2.18 0.62 1.65 1.28 2.05 2.02 - - -2.93 -4.0 - - -3.35 -3.6 -1.55 - - - -
- - 0.07 - - - - - - - - - - - - - - -1.39 - - - - - - - - - - - - - -1.54 -3.08 - 2.88 - 1.85 2.72 - 3.79 2.95 2.62 - - 2.89 - - - -0.81 - - - -1.1 0.23 0.24 - - -
-2.29 -4.36 -2.6 -1.53 -4.13 -1.83 -3.21 -2.01 -2.67 -2.25 -2.68 -2.09 -4.8 -4.15 -3.34 -3.96 -0.96 -3.18 -3.44 -2.13 -4.47 1.64 -5.39 -4.27 -3.45 0.47 2.32 -5.21 -1.68 -5.84 -6.49 -5.2 -2.44 - -1.89 -2.73 0.41 1.43 1.21 2.54 2.4 1.36 1.29 1.79 -0.72 1.42 -1.79 0.93 2.94 -3.81 -3.78 -3.39 -1.97 1.65 -3.47 -2.59 - -0.13
-1.55 -1.82 1.13 -3.63 -5.59 - -7.81 -6.62 -9.02 -7.33 -10.17 -10.26 1.4 2.7 2.14 2.11 -1.46 -1.52 -2.22 1.8 -4.25 1.51 -4.62 -3.13 -3.38 0.05 1.69 -3.1 -3.18 -3.27 -4.29 -3.77 -3.51 -0.26 -1.53 -5.02 -4.21 -4.36 -5.15 -3.6 -4.15 -3.98 -2.74 -3.11 -5.2 -2.78 -2.3 0.55 0.78 -3.35 -0.76 -3.19 0.32 0.65 1.48 0.43 2.73 2.35
-3.6 -0.93 -0.48 -1.59 -3.25 -9.08 -4.86 -7.45 -6.37 -11.0 -10.8 -12.89 -1.32 -1.23 -3.3 -2.62 0.23 -1.1 -2.23 1.59 -2.69 2.82 -1.4 -1.59 -2.01 -2.66 1.04 -2.14 -3.24 -2.78 -0.79 -1.34 -1.6 -4.37 0.15 -2.58 0.03 0.55 0.47 0.82 0.71 -0.02 0.83 0.13 -1.78 1.9 -0.24 1.76 -1.04 0.64 0.73 -0.98 1.41 -0.04 0.47 2.56 -1.37 0.86
-0.25 -0.49 -0.18 -2.15 -5.91 -8.83 -4.31 -8.8 -8.03 -9.77 -9.13 -10.53 2.0 0.7 0.97 -0.01 -1.41 1.63 -1.68 -2.01 0.43 0.81 0.04 0.65 0.42 0.28 1.21 -0.19 0.0 0.25 -1.06 0.22 0.28 -1.41 -2.58 -2.96 -1.01 -0.91 -0.79 -2.86 -1.41 -1.85 -2.37 -2.47 -2.77 -0.65 1.64 2.59 -1.64 -6.4 -4.49 0.22 0.12 1.76 0.91 -0.64 -1.26 1.93
-3.58 -0.16 2.73 0.78 -2.98 - -4.58 -8.94 - - - - 0.69 -3.25 -1.94 -0.1 -1.72 -1.57 0.83 0.71 1.3 0.3 -0.03 0.01 -2.24 -2.1 2.49 0.59 -0.65 -1.26 -1.13 -1.37 -1.28 -2.14 -3.09 -3.16 -0.55 0.36 -0.62 -4.59 -1.36 -1.33 -1.34 -0.58 -1.73 -6.53 -3.29 2.23 1.96 - -3.2 - -2.13 1.9 0.96 0.17 0.43 1.82
- - 2.71 -0.67 - - - - -2.06 - - -0.59 -1.59 - - - - - - - - - - - -2.24 - - - -1.38 - - - 0.14 - 1.51 1.53 1.22 1.9 - 2.35 2.31 1.31 1.31 3.35 - - - 1.78 1.61 - - - -0.03 - -0.17 1.32 - -
- - - 3.54 - - - - - - - - 1.96 - - - - - - - - 5.4 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.68 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - -
- - - 2.92 - - 2.11 - -1.46 - - - - - - - - - 2.68 - - 3.78 0.83 -1.18 -0.09 - 0.36 - 1.18 2.4 - 0.52 -3.27 - 2.68 - - - - - - -3.25 - - - - - - 1.83 - - - 1.01 - - - - -
-10.66 - - -11.0 - - - - - - - - -11.93 - - - -10.96 -5.58 - - -6.65 0.71 - -8.25 -5.57 -8.2 1.29 -7.96 -5.9 -9.04 - -9.83 -7.02 -6.22 -9.41 - 2.37 2.91 1.77 2.61 1.19 2.38 3.73 3.44 -5.08 - - -11.82 -11.78 - - - -9.5 - - - - -
-2.17 -1.02 -0.95 -2.09 -1.99 - -2.67 -8.53 -9.3 - - - -2.21 -0.73 0.62 1.65 -0.86 0.11 -2.21 -1.23 -1.02 -0.04 -0.45 -0.57 -0.72 -0.33 1.91 -1.05 -0.33 -1.11 -0.38 -0.88 -0.71 -3.63 0.27 0.25 -2.24 -0.74 -3.11 -1.38 -0.63 -0.07 -1.79 -1.31 0.55 0.09 -2.71 2.31 2.68 -3.7 -5.68 -0.8 0.38 1.25 2.37 1.8 0.07 1.31
-3.48 -2.39 - - - - - - - - - - - - - - -3.8 - - - -3.05 -0.67 -2.94 -2.18 -1.78 -1.05 0.11 -2.97 -0.82 -1.93 -0.34 0.98 2.2 -1.07 3.6 2.71 1.23 1.31 2.13 1.32 1.45 1.43 0.79 1.49 2.23 - - - -1.61 - - - -0.82 - - - - -
- - -3.2 0.74 5.03 - 3.86 -4.83 - -5.72 - - -2.87 - -4.37 -5.03 -1.65 -4.21 - - - 1.7 -4.05 -3.85 -5.15 -2.91 -3.79 -3.62 -3.84 - -4.26 -3.77 -2.98 - -1.69 - - -3.0 -0.89 - - -3.48 - -0.85 - -4.14 - -3.03 -0.95 -1.28 -1.71 - -5.9 - -3.62 -1.17 -2.49 -0.86
-3.62 -1.05 -4.75 0.49 5.03 - 3.31 -6.79 - -6.04 -6.82 -6.85 -3.08 -5.14 -3.66 -5.35 -0.27 -4.06 - -3.45 -5.03 2.22 -3.63 -4.07 -4.18 -2.24 -1.57 -6.27 -6.36 - -2.96 -1.94 -1.93 - -4.06 -3.45 -1.75 -2.44 -0.67 -2.46 - -2.16 -3.53 -1.05 -3.83 -2.56 - -3.23 -1.11 -1.33 -1.25 -3.01 -5.03 -3.93 -1.5 -2.16 -1.39 -0.16
0.08 0.04 -1.03 0.75 4.44 -4.67 2.2 -6.29 -7.01 -5.99 - - -1.61 -5.22 - -4.0 0.35 -2.83 -1.22 -1.43 -4.02 3.06 - -2.99 -3.03 -0.13 0.61 -3.48 -2.58 -3.76 -1.63 -1.45 -0.7 - -1.37 -2.38 0.02 -1.55 -1.49 -0.63 - -1.01 -0.12 -0.46 -2.45 -0.25 - -1.44 -0.86 -0.11 -0.17 -3.44 -3.28 -1.9 -0.81 -0.79 -2.18 0.32
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.2 - - - - - - - - - - - - - 4.41 - - - - - - - - -
- - -1.96 - -0.3 - -2.88 -6.21 -4.92 - -2.8 -4.64 -1.86 -0.86 -2.49 -0.02 - 1.22 - - -20.65 1.1 - -2.95 -4.29 0.9 -0.79 - -2.6 -2.48 -27.64 -5.0 -1.03 0.58 0.55 0.98 2.14 0.45 1.54 2.34 0.01 1.6 2.24 1.4 1.49 0.53 -4.42 1.91 2.11 - - - 0.77 1.27 -3.85 - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.14 -0.33 -0.33 0.69 -4.56 -4.46 -2.49 -2.79 -2.76 -3.24 -3.24 -3.33 -0.29 -0.25 -0.52 -0.8 0.36 -0.99 -0.78 -0.73 0.36 1.56 0.43 0.51 0.48 0.08 1.34 0.59 0.63 0.42 0.54 0.55 0.51 -1.77 0.35 -0.78 -0.65 -0.83 -0.6 -0.54 -0.97 -0.68 0.08 -0.31 -0.39 -0.02 -3.32 0.54 -0.21 -0.32 -0.29 -0.16 -0.59 -0.22 2.22 2.14 -0.41 -0.62
- - - - -1.03 - - -6.29 -6.65 -6.13 -7.38 - -4.19 - -5.37 -5.72 - -4.37 - - -4.87 -1.31 - - -2.15 - - -3.77 -1.42 -4.04 -5.04 -3.17 -0.06 3.68 3.94 1.24 1.35 1.66 0.71 1.81 1.29 1.81 1.78 1.33 0.63 - - - -2.24 - - - - - - - - -
4.91 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.81 - - - - - - - - -
- - -5.5 -3.44 -3.78 - -2.24 -6.89 -6.36 -6.1 -5.83 -3.94 - -5.64 - - -3.78 -2.86 - - -2.98 -2.3 -3.37 -4.1 -1.26 -0.54 0.14 -3.42 -0.18 -2.53 -2.76 -1.14 1.15 2.03 3.06 2.22 1.92 2.07 1.6 2.08 1.79 1.72 2.33 1.72 1.58 - - - -3.25 - - - -7.05 - - - -4.37 -
- - - - - -1.03 -2.06 - -3.47 -3.16 - - -2.54 - - -3.9 - -3.38 - - -2.44 - - - -1.84 - - -2.9 -1.11 - -1.24 -0.29 0.8 - 2.85 2.19 2.31 1.86 2.38 2.01 3.04 2.12 1.27 1.47 2.3 - - - -1.3 - - - -4.61 - - - - -
-1.63 -1.84 -1.44 0.26 -6.92 -5.69 - - -10.19 - - - -1.95 -1.93 -1.35 -1.54 0.11 0.01 -0.96 -0.87 -2.91 2.06 -3.34 -3.05 -3.0 -0.68 0.33 -2.26 -1.44 -2.27 -2.54 -2.92 -3.13 -1.35 -1.95 -3.22 1.38 1.91 1.85 1.65 2.07 1.31 1.44 1.19 -0.59 -2.6 -1.77 1.56 -0.22 -6.02 -5.55 -1.16 0.22 1.98 0.6 -0.77 -0.3 2.24
- - - - - - - - - 1.28 1.49 1.27 - - - - - - - - - 2.91 - - - - 1.53 - 0.15 - - - 1.15 - 3.7 2.07 - 2.81 - 2.47 - 2.55 - - - - - 0.04 - - - - - - - - - -
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.