Heatmap: Cluster_4 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
- - - 2.72 - - - - - - 2.97 1.33 - - - - - - - - - - - - - - - - - - - 2.12 2.29 - - 4.98 - - - - - - - - - - - - - - - - -1.62 - - - - -
-3.04 -2.9 - - -4.98 - - - - - - - -5.98 -8.53 - -8.39 -6.83 -2.25 - - -1.29 2.04 -0.71 0.1 -0.33 1.17 1.83 -1.29 -1.31 -0.29 0.96 0.71 0.4 -2.09 -0.89 -0.66 1.63 1.81 1.15 1.79 1.91 1.27 1.64 1.35 0.3 3.38 -3.89 -1.64 -4.8 - - -2.94 -1.19 -5.74 - - - -
-4.77 - 0.6 -1.17 -5.23 - - - - - - - 0.18 1.03 -0.44 -0.08 -3.95 0.86 1.06 0.23 1.14 -0.63 0.95 0.7 -0.29 2.1 -0.13 1.1 -4.74 -2.72 -5.74 -1.63 -1.62 - -3.11 -1.18 0.73 1.6 1.97 1.95 1.69 1.72 0.81 2.23 2.14 -6.03 - - -3.55 - -6.31 - -5.38 - - - - -
- - - - - - 4.91 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.81 - - - - - - - - -
- - - - - - 1.65 - - - - - - - - - - - - - - 4.96 - - - - 1.99 - - - - - - - - - - - - - - - - - - - 2.04 - - - - - 1.66 3.64 - - - -
- - - - 2.6 - 3.55 - - - - - -0.9 -1.29 -0.82 -1.79 -0.26 -0.04 - - - 1.64 - - - - 3.11 - - - - - - - - - - - - - - -3.0 - - - - 1.63 0.53 1.28 - -0.48 - 2.96 3.03 0.18 - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.11 - 1.48 4.9 - - - - - 3.01 - - - - - - - - -
- - - - 3.09 - - - - - - - - - - - - - - - - - - - 0.69 - - - - - - 0.41 - - - - - - 5.07 - - 1.13 - - - - - - 3.31 - - - -0.2 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.82 - - - - - - 4.85 - - - -0.29 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.32 - 3.57 - 3.54 - 1.48 - - 4.6 - - - 1.28 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - -0.61 - - - - - - - - - - - - - - - - - - - - - - - 1.23 - - - - - 2.47 3.65 5.21 - - - - - - - - - - - - - -
-3.86 -0.01 -7.36 -4.57 -4.41 -10.47 -8.37 -8.57 -5.82 -9.41 -9.34 -6.34 -7.47 -5.28 -2.76 -4.51 -5.27 -2.53 -6.12 0.59 -0.27 -0.99 0.31 0.44 0.33 0.37 2.82 -0.56 -0.74 -0.41 -0.22 0.52 0.93 1.44 1.85 1.36 1.56 0.99 0.07 1.36 0.91 1.01 0.87 1.72 0.61 2.75 -6.62 -2.64 -7.21 -2.57 -7.06 -7.33 -5.78 -4.78 -5.98 - - -6.04
- - - - - - - - - - - -2.0 - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.6 - 2.12 4.75 3.4 3.31 - - - - - - - - - - - - -
-7.95 -8.18 -7.37 -3.72 -4.51 - -7.21 -7.48 -7.58 -8.51 -8.36 -8.97 -6.95 -5.81 -5.98 -5.38 -5.07 -2.7 -6.39 -4.92 0.79 1.23 -2.27 0.43 1.52 0.14 1.17 0.22 1.54 1.05 -2.1 -0.5 -0.4 -4.49 -1.84 -1.05 0.42 0.82 0.24 0.4 1.43 1.02 0.56 0.32 1.41 4.37 -7.8 -1.1 -6.14 -8.1 -6.87 -7.34 -4.91 -4.24 -5.31 -5.02 -7.18 -7.49
-1.15 -1.44 -1.19 -2.33 -7.7 -8.61 -7.98 -11.13 -10.75 -10.11 -9.1 -9.65 -2.2 -4.23 -4.14 -3.59 -0.39 0.26 -3.12 -1.44 -1.25 2.42 -1.26 -0.78 -1.02 0.93 1.6 -1.69 -1.64 -0.82 0.07 0.84 0.57 -2.27 -0.68 -0.57 1.76 1.83 1.49 2.18 1.85 1.46 1.29 1.43 0.66 1.63 -0.96 -1.66 -4.58 0.55 -1.12 -3.21 -1.51 -2.37 -5.0 -6.68 -3.06 -1.35
- 4.5 - 5.14 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - -0.37 0.16 -0.74 -3.19 -1.9 -0.51 -0.07 1.79 -0.94 - -0.65 - - - - - - - - - - -0.64 - - - -1.09 - 2.25 2.17 1.96 2.03 3.06 2.55 - 0.38 3.19 - - - - - 2.47 - - - -1.44 - - - - -
0.1 0.48 -0.99 -0.35 -3.31 -9.89 1.49 -10.01 -8.11 -8.96 -9.16 -7.34 -1.53 -1.32 -1.15 -1.74 -0.99 1.22 -0.73 0.26 0.21 0.88 0.0 0.56 0.58 0.8 1.99 -0.42 -0.14 0.09 -0.29 0.33 -0.0 -1.9 -0.39 -0.28 1.32 1.04 0.93 1.38 0.72 0.89 0.94 1.33 0.33 1.69 -2.52 -1.32 -2.19 -0.75 -1.49 -2.29 -1.61 -1.43 -2.25 -3.15 -2.47 -2.03
-4.31 -1.85 -4.3 -2.01 -2.7 -5.01 -3.06 -8.08 -6.93 -10.65 -9.69 -9.5 -3.31 -5.91 -7.49 -5.98 -2.57 -2.24 -4.95 -0.4 -1.45 -0.15 -3.09 -2.11 -1.74 -1.87 -0.83 -1.88 -0.48 -1.33 -2.31 -1.51 -1.45 -3.65 -0.83 -3.21 0.77 0.6 -0.01 0.48 0.15 0.12 0.56 0.57 -1.46 4.55 -3.89 3.65 -3.09 -2.19 -5.45 -2.97 -1.91 -1.09 -1.83 -6.95 -6.51 0.42
-3.62 -2.14 -0.91 -5.47 - - - -12.17 -10.51 - - -8.26 -4.12 -2.92 -1.69 -2.51 -5.03 -5.06 -0.92 -0.7 -4.65 -2.45 -3.64 -4.21 -3.57 0.4 -0.38 -3.68 -4.18 -3.51 -3.01 -3.87 -3.49 -3.37 -1.08 -0.8 2.08 2.24 1.68 1.99 2.04 1.86 2.16 2.69 1.41 3.59 -6.27 -1.22 -1.21 -4.17 -4.03 -4.75 -4.21 -3.47 -3.13 -3.75 -8.96 -1.97
-2.87 0.46 -4.15 -1.6 -2.92 -10.29 -4.3 -8.56 -4.85 -8.28 -6.57 -4.08 -4.79 -4.92 -4.47 -5.92 -0.92 -2.98 -3.84 0.04 -1.31 0.07 -1.19 -0.42 -0.89 0.46 1.68 -2.45 -2.1 -1.63 -1.45 -0.79 -0.49 -2.3 -0.1 0.28 2.41 1.85 1.85 2.13 1.35 1.57 1.99 2.21 1.12 2.43 -5.15 -2.52 -1.71 0.59 -2.81 -2.28 -2.34 -3.05 -5.71 -6.47 -5.1 -3.39
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.18 - - - 3.06 - - - - - - 3.76 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.13 - - - 2.61 - 2.39 - 5.16 - - - - 2.69 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.76 - - - - - 1.86 - - - -2.28 - - - - -
- - - 2.03 - - - - - - - - 0.57 - -0.05 0.68 2.06 -0.46 - - - - - 0.76 -0.61 0.41 0.52 - - - 1.55 1.81 1.94 3.23 - - - - - -0.18 - 1.46 3.27 - - - - - 1.73 - - - 0.45 - - 1.17 - -
-5.76 -1.29 -7.4 -5.87 -5.91 - -4.54 -11.32 -6.05 -12.02 -7.97 -5.36 -6.45 -7.73 -7.07 -9.17 -3.22 -5.31 -5.88 -0.9 -2.03 -0.95 -3.16 -2.78 -2.42 -1.83 2.19 -2.56 -3.17 -2.56 -3.73 -3.1 -3.07 -4.02 -2.56 -2.74 2.63 2.37 2.15 2.1 2.23 2.01 2.42 2.69 0.59 2.74 -6.89 -2.69 -6.07 -2.98 -3.44 -3.16 -2.79 -7.31 -8.91 -8.56 -7.22 -
- - - 2.39 - - - - - - - - 1.77 - - 2.83 - - - - - - - 0.67 - 2.83 - - - - - - - - - - - - - - - - - - - - - 3.74 4.26 - - - -0.04 - - - - -
-7.12 -3.57 -9.94 -10.32 -7.07 - - -11.51 -8.45 - -11.96 -8.88 -10.91 -8.84 -5.83 -8.86 -5.14 -6.33 -6.97 -1.7 -2.95 0.33 -2.94 -3.47 -3.73 -0.75 0.08 -3.3 -3.21 -3.31 -3.89 -3.24 -2.48 -2.08 -1.15 -1.08 2.86 2.74 2.26 2.54 2.5 2.31 2.23 3.02 1.54 0.36 -9.6 -4.24 -8.04 -4.03 -9.18 -9.94 -8.29 -7.52 -7.09 - - -4.53
-1.87 0.74 -2.44 -3.01 2.48 -9.3 -2.27 -8.36 -5.79 -8.28 -7.7 -6.17 -3.24 -3.44 -3.26 -4.31 -1.97 -1.36 -4.0 -0.3 0.04 1.57 -0.57 0.31 -0.02 1.3 2.07 -1.28 -0.75 -0.39 -1.66 -0.39 -0.83 -0.83 0.17 0.41 1.35 1.25 1.05 1.46 1.07 1.04 1.16 1.19 1.18 1.87 -5.72 -2.13 -3.63 1.33 -2.08 -3.65 -3.94 -2.4 -3.51 -5.77 -4.2 -3.29
-2.51 -0.76 -3.48 -1.63 -0.92 -10.88 -3.94 -9.61 -6.11 -10.14 -8.2 -5.05 -6.63 -5.63 -5.01 -5.6 -2.69 -5.83 -3.08 -1.3 -3.86 -1.5 -3.73 -2.84 -3.85 0.63 -0.23 -3.84 -3.8 -3.69 -3.79 -2.61 -2.38 -3.21 -1.11 0.49 2.75 2.29 2.26 2.52 2.21 2.14 2.02 2.52 2.31 1.59 -7.02 -3.44 -5.08 -2.24 -2.63 -4.18 -5.62 -4.78 -5.17 -7.27 -5.42 -6.91
-7.59 - -8.94 -4.84 - - - -9.98 -6.31 - - -7.98 -7.06 -9.28 -7.33 -10.02 -5.6 -4.92 - -5.48 -5.62 0.52 -8.4 -4.06 -5.12 -2.94 1.78 -8.57 -2.91 -4.05 -8.51 -4.47 -3.43 -1.72 -1.79 -1.24 3.27 2.06 2.01 2.78 1.39 2.1 2.23 2.96 -0.26 2.65 -4.93 -4.23 -7.74 -5.06 - -7.95 -7.4 -7.97 -4.88 - - -
-1.72 1.39 -1.36 -3.68 -2.6 -9.37 -6.57 -10.6 -5.3 -8.2 -8.36 -5.61 -2.08 -3.1 -2.71 -4.14 -0.93 0.03 -3.3 1.51 0.88 -2.24 1.92 1.61 0.59 0.68 2.07 0.04 -0.98 0.19 -0.05 0.44 -0.58 1.08 0.03 0.28 1.56 0.73 0.66 1.5 0.65 0.98 0.43 0.88 0.85 1.04 -2.41 -1.1 -5.76 0.74 -3.35 -1.55 -2.19 -2.07 -3.26 -7.07 -5.07 -3.05
-5.16 -3.83 -2.17 -4.59 -6.17 -8.16 - -5.48 -6.48 -6.08 -5.44 -5.79 -3.47 -3.42 -2.03 -2.1 -3.31 -1.02 -7.19 -4.86 -2.1 0.16 -3.09 -1.92 -1.76 1.41 0.79 -2.91 -2.64 -2.61 -4.61 -2.95 -2.85 -1.96 -1.78 0.33 2.3 2.62 2.42 2.23 2.62 2.47 1.17 1.64 2.47 0.06 -3.98 -0.79 -4.03 -0.41 -3.66 -3.73 -2.68 -2.56 -2.87 -4.32 -3.92 -1.92
- - - - - - - - - - - - 3.47 - - 1.7 - - - - - - - - - - - - - - - - - - - - - 4.21 - - - 2.63 - - - - - - 4.02 - - - 1.47 - - - - -
-2.33 -0.79 -2.85 -2.39 -3.9 -13.05 -5.45 -10.93 -7.12 -11.47 -9.65 -6.56 -5.19 -3.85 -2.37 -3.57 -1.35 -0.63 -4.29 -1.6 -0.26 1.48 0.04 0.72 0.45 1.75 2.53 -2.34 -0.62 -0.67 -0.6 0.42 0.24 -2.91 0.26 0.81 1.89 1.38 1.67 1.77 1.15 1.36 1.17 1.41 1.37 1.19 -6.65 -1.64 -1.93 0.35 -5.37 -7.36 -4.59 -0.27 -4.64 -8.66 -8.26 -2.83
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.17 - - - - - 1.59 5.03 - - - - - 2.13 - - - - - - - - -
-3.52 -3.55 -2.3 -9.53 -3.71 -9.39 -8.68 -10.33 -8.0 -7.71 -7.86 -7.46 -6.79 -2.0 -2.55 -2.82 -0.37 0.95 -3.38 -1.79 -0.18 1.17 -0.74 -0.06 0.37 0.17 1.04 -1.19 -0.18 -0.97 -1.29 -0.56 -0.51 -2.86 -1.86 -2.26 2.29 2.23 2.06 1.88 2.02 2.29 1.94 1.94 1.58 -1.2 -4.94 -1.66 -5.77 0.07 -3.97 -2.97 -2.16 -2.13 -1.51 -2.14 -4.39 -1.89
- - - 3.21 - - - 3.04 - 0.53 - - 2.99 1.74 - 2.85 - 1.73 - - - - - - - - - - - - - - - - - - - - - - - -0.29 - - - - - - 3.69 - - 1.71 -1.66 - - - - -
- - - - - - - - - - - - - - 1.96 - - - - - - - - - - - - - - - - - - - - 5.32 - - - - - - - - - - - - 2.72 - - - - - - 2.9 - -
- - 0.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.28 - 5.8 - - - - - - - - -2.58 - - - - -
5.0 - - - - - - - - - - - - - - - - - - - - 4.7 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - 2.65 - - 1.98 - - - - - 3.64 1.69 - 0.05 - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.67 - - - - - - - - -3.26 - 2.44 - - -
-5.05 -0.71 -4.96 -4.65 -3.99 - - - -7.5 - - -6.85 -5.6 -7.95 -6.09 -6.8 -4.21 -1.06 -4.38 0.84 -4.33 -1.65 1.58 1.55 0.76 -0.07 4.7 -5.68 -4.37 -4.98 -3.45 -2.19 -2.87 -1.9 -2.18 -3.02 1.47 0.64 -0.2 0.5 -0.07 0.34 1.15 1.89 -1.46 1.04 -3.96 -0.88 -5.52 -3.96 -9.0 -4.28 -3.63 -3.1 -1.42 -5.94 - -3.41
-1.23 -0.93 -0.72 -4.08 -0.85 -0.83 -1.5 -1.73 -1.24 -0.98 -0.92 -0.91 -1.06 -1.08 -0.44 -0.85 -1.18 -0.23 -2.53 -1.51 0.06 1.72 -0.18 0.34 0.55 -0.24 0.96 -0.51 0.18 0.08 0.11 0.21 0.28 -2.09 0.33 -0.02 1.58 1.5 1.39 1.36 1.38 1.22 1.48 1.41 0.91 -0.92 -2.05 -0.74 -1.12 -0.64 -2.46 -3.23 -1.91 -0.32 -2.44 -4.49 -4.4 0.7
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 1.96 - - - - - - - - - - 0.83 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.52 - 5.44 - - - - 2.89 - - - -0.32 - - - - -
- - - 3.3 - - - 1.35 - - - - 3.71 1.39 1.19 1.65 - - - - - - - - - - - - - - - - - - - - - - - - - - 4.42 - - - - - 1.52 - - - -2.52 - - - - -
0.18 0.91 -1.09 -2.7 -1.29 -9.69 -3.65 -8.11 -8.2 -8.63 -8.35 -7.07 -1.7 -0.5 -0.68 -1.42 -1.78 -1.38 -2.08 -0.66 -0.86 1.28 -0.94 -0.4 -0.79 0.33 0.78 -1.69 -0.69 -0.89 -1.07 -0.23 -0.9 -1.67 0.19 0.15 2.11 1.47 1.67 1.77 1.3 1.57 1.89 1.77 1.07 1.57 -4.4 -1.09 -2.23 1.17 -0.93 -2.75 -2.27 -0.98 -2.42 -3.09 -2.03 -1.36
- - - 3.6 3.0 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.4 - 5.04 - - 0.8 - - - - - -0.83 - - - - -
- - - 4.83 - - - - 1.46 - - - 4.62 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.16 - - - - - - - - - - - - - - - -
0.57 0.47 0.3 0.11 -5.4 -3.95 -6.02 -4.78 -3.91 -3.86 -3.97 -3.52 -0.95 -1.75 -1.8 -2.27 -1.65 -0.65 -0.1 -0.07 -1.29 0.78 -1.58 -1.35 -1.11 1.24 1.82 -1.11 -1.28 -1.87 -2.16 -1.43 -1.01 0.27 -0.85 -1.08 1.59 1.62 1.89 1.7 1.74 1.46 1.7 1.82 0.37 -2.59 -4.17 -0.51 -1.3 0.99 -0.82 -3.15 -1.89 -0.32 -0.71 -1.9 -0.89 -0.21
-0.77 2.79 -2.43 -2.79 -0.88 -9.62 -3.75 -8.81 -2.61 -5.44 -4.17 -2.09 -4.47 -1.36 -1.2 -1.24 -1.87 0.42 -2.46 1.65 -0.04 -0.66 0.58 1.38 0.19 0.94 2.24 -1.76 -0.76 0.35 0.41 1.41 -0.13 -0.83 -0.89 -0.84 0.92 0.47 0.51 1.14 0.06 0.5 0.87 0.94 -0.19 1.43 -3.12 0.1 -4.55 0.06 -2.06 -1.94 -1.58 -1.41 -3.15 -4.07 -4.36 -2.38
-2.24 -0.86 -3.07 -5.87 -4.8 - -7.05 -12.64 -8.08 -13.3 -11.16 -7.61 -4.36 -4.69 -5.05 -5.14 -3.8 -2.7 -2.32 -0.79 -1.62 -0.08 -3.63 -2.37 -2.14 1.15 1.96 -1.87 -1.5 -1.65 -3.52 -2.24 -1.71 -2.32 -2.09 -0.26 2.46 2.18 2.14 2.14 2.08 2.13 1.81 2.31 1.94 1.81 -3.63 -1.37 -3.12 -1.06 -3.62 -3.74 -3.18 -2.63 -3.32 -3.41 -3.99 -2.58
-3.88 0.05 -4.52 -7.87 -4.18 - -8.09 -11.52 -6.87 -13.48 -10.05 -6.04 -7.75 -3.73 -4.29 -4.99 -3.32 -2.65 -2.74 0.6 -1.23 -0.74 -0.8 -0.84 -0.97 1.06 2.0 -1.8 -2.21 -1.9 -2.62 -1.96 -1.81 -2.36 -1.36 0.32 2.4 2.12 1.98 1.99 1.89 2.12 2.03 2.46 2.04 1.1 -4.66 -1.92 -3.59 -1.69 -4.64 -3.57 -3.58 -4.25 -4.58 -3.55 -4.02 -4.02
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.