Heatmap: Cluster_26 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
-3.27 -4.08 -4.13 -7.08 -8.41 - - - - -12.36 - - -7.41 -6.6 -6.42 -6.85 -4.09 -7.25 -4.14 -3.75 -4.38 -6.6 -4.13 -4.11 -5.01 -4.77 -6.23 -3.95 -4.32 -4.45 -3.56 -4.02 -4.43 -7.17 -4.9 -6.31 -4.58 -3.97 -5.39 -3.85 -4.8 -4.64 -3.33 -4.23 -4.56 -4.66 -11.96 -1.51 -6.99 -3.68 -3.68 -5.51 -5.14 5.05 4.33 0.52 -6.4 0.05
-4.64 -5.44 -5.87 -7.44 - - - - - - - - - -7.39 -8.17 - - - -4.55 -4.99 -7.75 -6.03 - -8.66 -7.73 - -9.33 -6.37 - -5.32 -8.47 -7.17 -8.48 -4.62 -4.69 -7.19 -4.14 -6.55 -5.42 -6.0 -5.42 -5.81 - - -6.58 - -8.71 -1.88 -6.59 -7.51 -6.12 -7.02 -8.54 3.84 4.15 0.06 -8.21 4.59
-6.33 -6.17 -7.18 -9.43 -8.38 - - - - - - - -7.71 -6.71 -5.05 -4.44 -5.18 -5.73 -6.31 -6.17 -7.52 -5.75 -7.37 -6.41 -7.97 -6.69 -7.47 -6.05 -9.35 -6.47 -6.13 -6.25 -6.59 - -5.81 -6.68 -6.41 -6.86 - -5.68 -6.37 -5.79 -4.91 -5.33 -5.48 -6.6 -2.97 -2.04 -6.17 -6.02 -5.09 -5.37 -5.79 4.11 5.13 -0.72 -6.11 2.0
-3.79 -4.45 -4.51 -8.8 - - - -10.74 -11.29 - - - -7.99 -5.6 -7.34 -6.86 -5.71 -8.01 -5.1 -5.16 -5.59 - -6.87 -7.56 -6.52 -5.74 -7.29 -5.72 -5.86 -5.71 -6.66 -6.23 -6.1 - -5.01 -5.56 -6.78 -4.78 -4.74 -4.71 -4.74 -4.76 -4.31 - -4.53 -7.51 - -2.24 -5.79 -5.53 -4.85 -6.61 -5.81 5.21 3.94 0.53 -6.37 1.58
- - -7.82 -5.13 -6.08 -7.93 -6.07 -4.87 -5.76 - - - -8.4 -2.5 -3.99 -4.78 -7.47 -10.0 -6.65 -9.59 -10.51 - -8.91 - -11.31 -5.73 - - - - - -11.35 - -6.02 -5.87 -5.35 -5.54 -6.05 - -8.41 - -6.68 -4.94 -6.76 -6.75 0.14 -5.29 0.12 -4.05 - -6.99 -2.92 -5.7 4.16 4.62 0.47 1.13 3.16
- - - 4.09 - - - - - - - - - 0.38 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.33 1.79 4.44 3.73 - -
- - - -1.45 4.34 - 0.46 - - - -3.14 - - - - - - - - - - - - -3.79 -1.79 - - - -2.16 - - - - - - - - - - - - -3.69 - - - - - - -0.63 - - - -6.43 3.53 4.53 - - -
- - - 2.94 2.84 - 4.14 - - - - - - 1.16 - - 0.6 - - - - - - - - - - - - - - -3.26 - - - - - - - - - - - - - - - - 2.17 1.01 - - - - 3.92 - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.71 - - - - - - 5.69 - - - - - - - - -
- - - 1.77 1.75 - - - -3.55 - - - 3.32 -2.86 - -2.66 - 0.83 - - - - -1.3 -1.39 -2.6 - -2.12 -1.61 - - - -3.09 - 1.58 0.39 - 0.73 -0.21 - 1.26 - -2.84 - - - 0.66 -1.46 - 3.87 -0.26 -1.37 2.13 1.64 0.79 - - - 0.22
-1.03 - -2.9 -0.57 -1.33 - - -5.33 - - - - -2.9 -1.53 -2.07 -0.73 -0.81 -0.48 0.94 0.18 -4.09 - - 0.05 0.64 2.45 0.1 -0.47 3.09 -2.16 - -2.34 0.28 0.93 1.81 0.45 - -1.31 - - - -1.73 - - - -2.19 0.22 1.62 -1.19 - -1.92 -2.3 0.18 3.73 1.29 -0.21 - -
- - -3.1 -0.36 - - - - - - - - - - - -4.28 - - -1.21 2.76 -2.02 1.85 -2.62 -4.2 - 0.62 -0.36 - -2.42 - - - -3.12 - -0.5 - -0.79 -1.68 - -1.07 0.3 1.17 - - 1.2 - -0.54 -1.44 -1.13 -1.64 - - 0.17 4.96 - - - 0.14
- - - 3.58 - - - - - - - - 1.23 0.88 - 0.99 1.38 0.55 - - - - - - - - - - - - - - - - - - - - - - - -1.67 - - - - - - 4.35 - - - -0.54 - 3.38 2.02 - -
-2.28 -3.46 -3.05 -1.22 -1.78 - - -8.3 -8.85 - - - -5.03 -5.68 - - -3.21 -5.15 -1.86 -3.81 -4.92 -6.24 -4.27 -4.97 -6.25 - -7.21 -4.98 -5.15 -5.5 -4.42 -4.14 -4.32 -2.51 - - - -4.65 - - -3.31 -4.67 - - - - -6.58 0.39 -2.31 - - -4.51 -3.89 4.29 4.48 0.12 -4.44 3.45
-2.81 -3.37 -3.56 -4.86 -5.7 - -8.33 - - -9.84 - -10.47 -7.84 -6.81 -8.34 -8.09 -3.26 -5.68 -2.69 -4.15 -2.66 -5.83 -2.89 -2.79 -3.41 -3.83 -9.14 -2.81 -3.25 -3.0 -2.86 -2.99 -3.55 -3.05 -3.74 -4.98 -6.08 -5.29 -4.58 -5.69 -6.17 -5.46 -5.44 - -5.2 -5.28 -8.48 -1.02 -5.63 -2.17 -1.79 -4.62 -4.98 3.66 5.14 0.71 -4.34 2.29
- -8.31 -7.41 -5.88 -7.86 - -9.45 -10.73 - - - - -6.38 -9.81 -9.99 -9.94 -8.05 -9.39 - -8.51 -7.47 -8.72 -9.26 -8.52 -9.02 -8.7 -7.84 -6.83 -7.51 -7.59 -10.21 -8.86 -8.14 -4.98 -7.59 - -6.83 - - - - -7.94 - - -6.36 -9.2 - -1.0 -5.94 -6.95 -5.31 -8.71 -7.78 3.67 5.28 -0.14 -5.64 2.31
- - -3.98 -1.72 - - - - - - - - -3.83 -4.23 -4.58 -5.22 -4.74 -4.36 - - -5.57 -1.04 -3.74 -3.86 -5.75 - -2.93 -3.16 -4.46 - -3.88 -3.39 -4.93 - -3.32 - -2.56 -3.49 -2.52 -3.17 - -4.47 -2.45 - - - - 0.84 -2.37 -3.79 -2.22 -3.65 -3.73 3.89 2.04 0.35 -5.31 5.03
-0.13 -0.63 -0.22 4.39 -0.76 - 1.09 -6.29 - - -6.58 - -1.6 -2.86 -1.9 -2.15 - -3.51 - - -1.61 - -3.46 -5.03 - - -3.56 -2.89 -3.99 - - - -1.62 -0.49 1.29 - - - - - - -2.68 - - - -1.6 - -0.16 1.69 -1.06 - - -0.62 3.93 - -2.55 -1.37 2.33
- - - - - - - - - - - - 2.46 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.11 - - 2.61 - - - -0.12 5.2 - - - -
- - - - - - - - - - - - 2.23 1.5 2.05 - - - - - - - - - 1.58 - - - - - - 1.35 - - - - - - - - - 1.75 - - - - - - 3.38 - - - 2.51 4.42 - - - -
- - - - - - - - - - - - - - - - - 2.58 - - - - - - - - - - - - - - - - - - - - - - - 1.38 - - - - - - 4.29 - - - 1.54 4.75 - - - -
-4.0 -5.61 -5.68 -6.7 -7.89 - -9.19 - -12.91 - - - -6.59 -7.04 -7.93 -7.05 -7.37 -9.6 -4.94 -5.08 -8.14 -7.21 -7.56 -7.63 -10.15 -4.83 -5.66 -7.13 -8.29 -8.78 -7.91 -8.04 -7.53 -7.59 -6.36 -6.22 -6.89 -6.61 -6.4 -5.21 -5.81 -6.11 -5.33 -5.36 -6.45 -7.9 -9.13 -2.2 -5.88 -6.22 -5.6 -8.24 -7.12 4.64 4.7 0.58 -6.83 2.26
-8.17 -8.23 -1.49 -3.32 - - -7.35 -7.08 -9.48 - -9.8 - -2.84 0.38 1.37 0.81 -1.85 2.94 -1.95 -6.74 - -1.71 -8.83 -5.81 -4.55 -7.58 -7.6 -8.06 -3.41 - - -10.36 -5.36 -5.76 -5.71 - -4.02 -7.9 -4.56 -4.55 -4.56 -4.9 -5.57 -4.52 -4.72 2.88 1.9 2.1 -3.61 -5.87 -6.91 -1.05 -0.98 4.04 0.37 2.93 -3.82 -0.49
- - - 3.36 1.58 - -3.2 -2.59 -5.87 - - - 0.69 - - -3.95 - - - - -3.75 - - -5.65 - -3.56 - - - -3.37 -2.17 -3.49 -3.83 - - -2.26 - - -0.54 -0.51 - -1.93 -1.55 - -1.5 -1.82 - - 0.18 - - - -3.48 5.1 0.15 -3.12 -1.57 1.16
-2.76 2.64 -3.71 4.9 0.45 - 0.15 -4.76 -4.88 -3.59 -3.16 - -4.31 -2.92 -0.66 -1.32 -2.2 -2.88 - -1.24 -2.88 -1.17 -5.17 -2.24 -1.19 -2.22 -2.98 -3.55 -0.55 -3.54 -3.98 -0.2 0.3 0.05 -1.55 -3.54 -1.82 -1.52 - -0.91 - -1.75 -2.76 - - - -4.52 2.33 0.33 - -3.59 -2.61 -0.27 0.61 -2.47 - -4.37 -4.31
- - - 0.7 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.42 -1.79 - - - - 3.07 3.15 3.1 1.37 4.77
-1.99 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -4.36 - 1.02 -4.53 - - - - 3.94 3.93 3.0 -2.42 4.07
-0.08 0.09 -0.73 1.28 0.45 -6.31 -1.61 -4.6 -5.16 -6.01 -5.53 -5.2 -0.35 -2.12 -3.39 -3.59 0.44 -2.24 -0.18 0.83 0.2 -4.57 0.03 -0.08 0.43 -0.81 -1.21 -0.01 0.22 0.35 0.02 0.33 0.96 -4.96 1.12 -1.58 -4.86 -3.79 -3.76 -2.44 -3.77 -2.82 -2.47 -4.73 -3.17 0.07 -0.98 0.78 3.48 1.31 1.13 -0.44 1.0 2.08 -0.38 -0.52 0.31 -1.69
-8.17 -9.09 0.46 -2.16 -4.42 -13.98 -9.89 -13.15 -13.07 -12.26 -13.31 - -8.1 -7.42 -7.15 -6.62 -9.35 -5.41 -6.89 -9.72 -9.65 -8.93 -15.08 -11.21 -10.65 -6.97 -13.2 -11.53 -7.81 -11.19 -12.56 -8.93 -9.03 -9.73 -3.48 -4.07 -9.8 -7.26 -7.31 -4.89 -7.91 -5.43 -9.77 -7.26 -5.24 -6.36 -10.74 -0.71 1.59 -6.81 -5.98 -13.48 -4.61 3.98 4.88 0.2 -1.76 2.49
-2.35 -0.7 0.13 -1.76 - - - - - - - - -0.12 -0.27 -1.26 0.46 0.71 -0.17 -0.23 -1.67 1.24 -4.95 1.2 1.37 1.41 0.05 -1.34 1.15 2.03 1.45 1.0 0.62 0.94 -1.54 1.19 1.26 - -2.77 -2.34 - - -1.07 - - -0.6 1.05 -1.75 1.69 -0.64 - -4.18 0.54 1.07 0.13 0.97 0.05 -1.84 1.03
-6.91 -6.65 -6.5 -8.46 -8.47 - -9.13 -12.47 - - -10.51 - -8.05 -7.35 -8.58 -8.99 -5.16 -7.47 -6.83 -6.93 -5.79 - -6.56 -5.83 -7.05 -5.2 -6.42 -5.21 -6.74 -6.91 -5.03 -5.82 -6.68 -6.67 -4.84 -8.46 -5.96 -6.43 -6.47 -4.92 -6.47 -5.35 -5.4 -4.43 -5.53 -8.33 - -2.0 -5.92 -6.08 -4.63 -7.75 -6.57 5.15 3.99 0.61 -7.05 2.09
-10.25 - -10.76 -10.42 - - - - - - -11.96 -10.57 -10.17 - - - -10.09 - - - - - - - -11.82 - - - - - - - -11.91 - - - - - - - - -11.36 - - - -7.45 - -1.71 -7.01 - - - -10.42 5.24 4.05 1.61 -7.91 -1.54
- - - -2.39 - - - -4.89 -6.62 - - - -3.91 -1.25 -1.48 -2.38 -3.65 -3.23 - - - -1.61 - - - -4.44 - - - - - - - - - - - - - - - -7.11 - -1.15 - -0.73 -4.85 3.09 2.6 - - - -4.12 4.8 3.19 1.1 -4.87 0.31
-4.48 -3.68 -0.66 -2.91 -4.22 - -6.82 - -9.89 - - - -1.58 -2.62 -4.81 -4.62 1.25 -1.79 -1.86 -0.82 0.05 -2.06 0.47 -0.17 -0.39 -1.69 -1.13 0.59 0.29 0.19 0.73 0.67 0.85 2.2 2.62 -0.59 -1.95 -2.68 -1.64 -1.82 -1.52 -1.55 -2.54 -2.8 -1.32 2.32 -1.49 1.1 -4.37 -0.83 -3.41 -0.08 -0.5 3.5 -1.54 -1.54 -7.81 1.69
- - - 2.99 - - - - - - - - -0.64 - - - - - - - - - - - - - - - -1.87 - - - - - - - - - - - - - - - - 1.3 - -0.05 -0.67 - - -0.66 -3.59 - 5.04 3.52 - -
- - 0.65 -2.31 -5.96 -4.35 -2.32 -7.1 -3.73 -6.99 -6.6 -7.66 -3.26 -7.82 -5.76 -6.93 - -3.91 - - - - -7.15 - - - - - - - -5.45 -6.31 -6.47 - - - - - - - - - - - - -5.21 -4.89 1.97 -0.81 -4.53 - - -0.92 4.79 3.42 0.34 -3.26 3.43
- - -7.87 -8.55 -6.01 - -8.22 -9.24 - - - - -6.87 - - - -7.4 - - - - - - - -8.81 -3.15 - - -8.29 - - - - -5.76 -6.51 -5.75 -6.6 -5.61 - -7.21 -5.56 -3.79 - - -3.82 -3.41 - 1.42 -4.3 - - - -7.61 4.28 5.04 -0.59 -6.28 0.76
-2.59 - -3.5 3.98 2.01 -0.62 0.26 -1.61 -1.6 -1.42 -2.02 -2.03 2.58 -3.59 -4.42 -3.53 -0.07 0.21 - - -2.92 1.52 -1.92 -2.41 -2.19 - -5.82 -1.84 -2.18 -2.2 -0.98 -1.04 -0.56 - 0.06 -1.36 0.61 -1.38 0.09 -1.13 - -1.58 -0.09 -1.88 -1.97 -4.33 -6.11 -1.22 1.53 -2.52 -2.61 -1.21 0.17 2.86 -2.13 -3.32 -2.63 -1.08
0.73 1.75 -0.56 3.44 1.77 - - 0.31 -0.12 -3.54 -3.88 -5.84 -0.05 0.22 -0.43 0.27 -1.7 -2.09 -0.27 1.23 -1.43 - -2.23 -1.04 -0.37 -3.22 -2.86 -0.91 0.19 -1.25 -0.64 0.48 1.81 -0.46 0.76 -0.74 - - -1.26 -2.77 - -2.97 - - -2.42 -4.12 -5.53 -3.0 3.2 -2.24 -3.1 -2.51 0.4 0.41 -0.08 -1.83 -1.33 -2.81
-3.71 - - 2.48 -0.58 - -2.41 -2.84 - - - - -1.64 0.05 -0.95 -1.55 1.11 0.42 - -2.04 0.73 - 0.22 -0.01 -3.02 - - 0.9 -2.03 -0.43 - -2.44 -2.1 - - - - - - - - -7.08 - - - -4.95 -3.01 -0.12 -3.11 - - -3.13 -0.45 5.09 -0.06 - -2.01 -0.11
- - - 1.07 1.52 - -0.53 - - - - - - - -1.69 -2.79 - - - - - - - - - -0.33 -0.45 -2.12 -1.98 - -1.11 -1.76 0.34 - 2.04 0.37 - -0.69 1.26 1.76 1.26 0.81 2.33 - 1.21 4.22 - - -12.71 -2.23 - - -2.77 2.47 - - - -
- - - - - - - - - - - - - -0.06 - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.48 - - - - - 4.01 -0.6 - 1.56 - -4.05 3.31 3.48 2.75 - 3.18
- - - - - - - - - - - - -1.03 3.59 2.97 2.68 - -1.99 - - - - - -3.42 - - -2.37 - - - - - - - - -0.25 0.5 - - - - -3.05 - - - - -2.45 1.13 3.35 - - - -1.01 3.93 - - - -
- - -0.64 1.11 -0.86 - - -3.72 -3.47 -7.07 -6.12 -4.01 2.13 -1.38 -1.13 -3.6 -3.38 -0.46 -1.61 -3.22 0.15 - 0.4 0.22 0.62 -3.41 -2.08 0.63 -0.1 -0.93 0.82 0.07 -0.86 - - - 0.12 -0.14 0.61 1.43 0.61 0.41 1.43 -0.35 0.93 -1.9 -0.6 -1.57 3.11 -1.73 0.97 1.67 0.8 -0.57 -1.11 -0.27 -0.23 0.72
1.1 - 1.48 4.56 - - -0.27 - - - - - 0.95 -0.32 - -1.73 - -2.06 0.3 -1.25 -1.15 - 0.43 - -0.86 0.13 - 0.21 - - -1.28 - - - - - - -0.33 - - - - - - - -1.63 -1.29 0.11 1.52 0.31 -1.22 - -0.48 3.43 - - - -
- - - - - - - - - - - - -3.66 - - - - -6.76 - - - - - - -6.17 - - - -5.07 - - - - - - - - - - - - - - - - - - 2.35 -4.12 - - - -8.11 -1.43 3.66 0.23 - 5.27
-2.17 -2.77 -3.22 - -3.47 -4.91 - -3.18 -4.02 -3.23 -3.88 -3.96 -4.32 -3.1 -2.58 -3.24 -3.82 -2.58 -4.01 -6.26 -4.61 - -3.56 -4.87 -5.48 -3.5 -4.31 -4.64 -5.04 -4.85 -3.06 -4.74 -5.1 - -4.45 -5.46 - -5.73 - -5.08 -4.58 -5.89 - - - -3.04 -7.8 -1.38 -3.41 -3.12 -5.93 -7.17 -4.94 4.31 4.92 -1.47 -4.96 2.08
- -4.58 -3.42 -3.89 - - - - - - - - -1.78 -4.63 -5.12 -3.35 -4.98 -5.77 - - -4.06 - - -5.18 -6.17 -3.46 -5.82 - - -4.74 -3.3 -7.09 -5.41 - -0.32 -1.09 1.19 2.11 0.41 1.14 1.9 1.12 1.39 1.59 1.04 -4.16 -2.07 1.3 -4.64 - -4.5 -1.45 -0.87 4.14 -0.47 -3.32 - 3.28
- - - -0.71 -2.8 - -2.5 - - - - - -2.44 -4.34 -4.22 - - -3.48 - - - - - - - - - - - - - - - - - -2.7 - - - - - - - - - -0.17 - 1.73 0.29 - - - -5.63 5.32 0.94 - - 3.22
- - - 1.87 2.09 - - -0.25 -1.72 - - - -0.98 1.6 - -0.42 - -0.4 - - -1.0 - - - - - - - - - - -0.39 -0.4 - 2.94 - 1.54 0.63 - - - 1.21 - - - 2.86 - 1.42 2.19 - - - -0.68 3.62 - - - -
-3.24 - - 3.73 1.41 - -0.76 - - - - - -3.0 -1.1 -1.99 -0.95 -1.33 -0.71 - - - - - -5.51 - - - -2.51 -3.67 - -3.67 - -4.85 - - - - - - - - -3.46 -1.29 - - -1.48 -0.08 1.83 -0.56 - -3.03 0.25 1.69 4.72 - - - 0.7
1.43 2.36 1.21 2.85 0.48 - -0.54 -8.37 -5.85 - - - 0.39 0.54 -1.24 -1.02 2.72 -1.44 1.18 2.09 -1.85 -3.13 -0.49 -0.62 -1.67 -0.93 -1.96 -1.16 -1.03 -2.12 -1.44 -0.9 -0.26 - -1.68 -1.2 -2.44 -1.85 -2.37 -0.03 -1.37 -1.15 -1.74 - 0.06 -0.02 -3.3 -0.19 1.5 -0.47 -2.45 -0.13 0.74 0.31 -0.52 -2.3 -1.9 -1.35
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.