Heatmap: Cluster_18 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
- - -10.34 -3.34 1.31 - 5.68 -10.03 -7.88 - - -11.66 -7.48 - - - -6.26 -11.0 - - -10.63 - - -10.01 -9.05 - - -10.25 -10.86 -8.96 -9.07 -9.54 -9.27 -7.37 -8.55 - - - - - - - - - - -4.02 - -1.25 -6.49 - -10.32 - -9.47 -1.03 -0.25 -1.06 0.16 -0.61
-3.76 - - - -0.44 - 5.78 -7.39 -7.1 - - - - -4.65 - -4.6 -4.46 - - -4.09 -2.97 -2.52 - - - -4.42 -0.44 -4.13 -4.35 - - -4.15 -4.6 - - - - - - -2.77 - -3.62 - - - - - -4.2 -1.57 - - - -4.36 - - - - -
- - - - - - 5.71 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.5 - - - - - - - - -
- - - - - - 5.61 - - - - - - 0.39 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.99 - - - - - - - - -
- - - 1.06 2.04 - 5.64 -1.95 -1.5 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.29 - - - - - - - - -
- - -8.63 -2.23 2.86 -7.16 5.66 -10.46 -8.21 - - - -8.58 - - - - - - - - -6.28 - - - - - - - -7.46 -6.54 -8.31 - - - - - - - - - - - - - - - - -4.33 - - - -9.4 - - - - -
- - - -0.77 4.21 - 5.18 - -7.05 - - - -1.17 -0.96 -0.89 -1.01 - -7.19 - - -5.99 - -4.29 -5.08 -4.38 - - -3.2 -4.35 - -4.39 -3.82 -6.74 - - - - - - - - -7.71 - - - - - -6.32 -4.28 - -3.87 -5.12 -6.69 - - - - -
- - -8.49 -2.63 3.92 - 5.29 -8.68 -3.86 - -8.58 - -9.23 -0.73 0.3 0.49 -5.8 -9.99 - -6.79 -7.65 - - -8.84 - - - - - - -8.57 -8.21 - - - - - - - - - - - - - - - - -4.9 - -7.92 -6.25 -7.36 -6.2 -6.82 -3.44 -3.52 -6.19
-3.17 -1.23 -1.87 -4.42 1.79 - 5.51 -9.91 -4.38 -11.38 -10.78 -12.58 -3.99 -5.18 -4.83 -5.04 -4.44 -4.57 -0.98 -0.34 -2.73 -4.48 -2.88 -2.93 -3.36 -1.79 -2.83 -2.66 -3.23 -3.39 -3.26 -3.09 -2.56 -2.27 -2.37 -2.11 -4.34 -4.23 -4.82 -5.37 -3.84 -3.42 -5.49 -5.75 -2.12 -2.94 -2.99 -0.43 -1.57 -7.14 -4.97 -3.39 -3.46 0.27 -2.89 -2.48 -3.73 -2.03
- - -2.61 -1.21 1.91 - 5.45 -4.01 -4.11 - - -4.99 -2.61 - - - - - - - - - - - - -1.69 - -3.69 - -2.46 - -3.79 - - - - -1.14 - - - - -2.49 - - - -1.49 -4.29 -2.23 2.88 - - - -1.95 - - - - -
- - -1.36 0.43 1.74 - 5.36 -8.61 - - - - -0.42 -2.94 -4.58 -3.89 1.16 -2.49 -1.14 -0.9 -1.54 - -0.8 -1.43 -3.76 -3.49 -5.51 -0.86 -5.3 -0.84 -0.58 -1.48 -1.73 - - - -2.65 -4.95 - - - - - - - -2.75 -3.65 -3.75 -3.56 -0.58 -0.64 -0.36 -0.37 -3.76 -4.86 -5.19 - -
-1.28 -2.01 -1.24 -2.82 1.25 -8.4 5.3 -9.1 -7.55 -9.12 - -10.44 -2.19 -3.94 -3.14 -2.82 -2.8 -3.31 -1.57 -1.71 -2.84 -2.36 -1.93 -2.45 -3.33 -3.14 -4.55 -2.04 -2.35 -1.71 -1.14 -0.58 -0.9 -1.71 -2.36 -3.04 -3.65 -3.24 -3.1 -3.23 -3.58 -3.17 -3.51 -3.28 -2.3 -3.09 -6.3 1.03 0.13 -2.12 -1.34 -5.84 -3.98 1.21 -0.72 -2.69 -2.57 0.25
-5.52 -6.51 -3.53 -3.38 0.32 -4.69 5.74 -5.21 -5.59 -4.75 -5.42 -4.5 -4.19 -1.8 -6.58 -4.38 -2.3 -4.55 -6.18 -5.78 -3.6 - -5.81 -5.27 -4.87 -6.98 -8.87 -2.82 -4.7 -3.32 -5.59 -4.58 -4.96 - -6.34 -6.95 - -6.18 - - - -6.2 -5.96 -4.92 -5.01 -4.77 -3.38 - -5.63 -4.18 -3.66 -0.48 -2.25 -6.81 -7.2 -2.2 - -
- - - -4.79 4.08 - 5.36 -9.8 -5.38 - -10.14 - -8.6 -9.99 -9.39 -9.62 - - -7.39 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -6.79 - - - -13.67 - - - - -
-2.81 -3.69 - -4.07 2.77 - 5.66 - -4.99 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -7.68 - -1.61 - - - -7.04 - - - - -
- - -4.53 - 2.84 - 5.66 - -3.92 - - - - -5.46 - - - - - - - - - -5.8 - - - - -4.29 - -4.95 - -5.41 - - - - - - - - - - - - - - - -5.33 - -4.16 - - - - - - -
-8.08 -6.61 -3.69 -1.93 2.94 -10.99 5.22 -8.91 -3.43 -10.08 -9.5 -10.01 -4.28 -3.52 -5.09 -4.69 -1.9 -3.03 -4.67 -4.06 -1.82 -8.65 -2.42 -2.52 -2.87 -4.74 -5.85 -1.53 -1.58 -1.21 -2.8 -3.07 -3.93 -4.42 -4.96 -6.03 -7.85 -6.52 -5.81 -6.33 -6.22 -6.41 -6.74 -6.77 -6.25 1.63 -2.98 0.11 -2.01 -2.65 -2.68 -1.13 -1.97 -1.84 0.97 -0.11 -4.83 -0.77
-5.24 -5.2 -1.84 -2.6 0.81 - 5.65 - -6.04 - - - -1.81 -0.63 -6.69 -4.43 -0.01 -2.85 -4.12 -2.56 -4.08 -1.8 - -4.77 -5.04 -5.4 -4.92 -3.85 -0.74 -4.78 - -3.55 -4.12 - -1.78 -2.8 -3.64 - - -3.12 - -5.04 - - - -3.57 - -3.04 -1.62 -5.21 - -4.57 -2.38 -2.47 -4.7 -3.79 -5.08 -
- - - - 2.29 - 5.58 - - - - - - - 0.83 - - - - - - - - - - - - - - - 1.07 - - - - - - - - - - - - - - - - - 0.54 - - - - - - - - -
- - -13.65 -8.11 3.06 -9.5 5.62 -7.83 -3.3 -8.72 -9.24 -10.66 -13.15 -12.41 -12.24 -7.45 -13.18 -11.11 - - -8.54 - -10.72 -9.45 -7.83 - -13.79 -7.99 -7.19 -6.67 -7.27 -5.41 -4.38 -5.8 -3.43 -8.58 -9.7 -12.36 -10.24 - - -11.22 - - -11.4 - - - -8.13 - - - -12.02 - - - - -
-1.44 -3.0 -1.86 - 4.09 - 5.18 -6.33 -3.13 - -4.65 - -1.7 - - -3.84 -3.32 -2.79 - - - - -3.8 -3.29 -2.92 - - -3.41 -3.16 -3.16 -4.08 -4.9 -3.75 - - - - - - - - -5.37 - - - -1.84 - - -2.5 - -0.91 -2.93 -5.76 -3.13 - - -0.02 -
-2.98 -2.63 -2.71 -0.69 1.9 - 5.53 -9.92 -7.53 - - - -1.99 -2.42 -3.13 -2.98 -3.04 -3.77 -3.21 -3.01 -2.8 -2.58 -2.83 -2.77 -2.48 -4.53 -4.07 -2.25 -2.65 -3.26 -2.41 -2.76 -2.38 - -0.84 -2.89 -4.61 -3.65 -4.54 -3.49 -3.55 -3.7 -4.48 -4.51 -5.5 -3.25 -3.85 -2.82 -1.47 -1.15 -0.89 -2.78 -2.96 -3.1 -2.9 -2.63 -0.99 -
-0.64 -1.22 -0.94 -0.16 1.75 -7.97 4.95 -9.37 -6.62 - -10.42 - -0.94 -0.68 -1.26 -1.39 -0.67 -2.31 -1.4 -1.18 -0.86 -1.47 -0.79 -0.94 -0.88 -2.66 -2.86 -0.67 -0.81 -0.69 -0.73 -0.84 -0.68 -1.62 -0.01 -1.92 -1.75 -1.65 -1.93 -1.8 -1.79 -2.16 -1.89 -2.23 -2.57 -2.19 -2.84 -1.6 -0.95 -0.02 0.7 -1.24 -1.62 -1.46 -1.26 -1.06 0.07 -1.59
-2.79 - - 2.57 2.21 - 5.43 - - - - - -2.89 - - - - -4.65 - - - - - - - - - - - - -3.73 -3.24 -3.03 - - - - - - - - -3.83 - - - -0.48 - - 1.21 -2.69 - - -1.98 - -2.47 - - -
-1.55 - - 0.81 2.32 - 5.16 -3.48 -4.28 -3.91 - - -1.03 - - -3.98 - - -0.46 - - - - - - -0.49 - - - - -2.32 - - - - - - - - - - -1.55 - - - - - - 3.45 - - -0.72 -2.57 -1.78 - -1.52 - -
- - -5.47 -2.15 2.4 - 5.64 -10.59 -3.89 - - -8.42 -4.96 -7.72 - - -5.13 -9.46 -4.52 -5.78 -5.39 - - -9.88 - - - - -8.03 - -7.93 -7.77 -8.28 - -6.18 - - - - - - -7.98 - - -5.75 -1.87 -1.99 -3.54 -7.44 -5.06 -3.18 -4.81 -5.26 -4.28 -3.75 -3.02 -3.31 0.17
- - - -3.89 3.41 - 5.56 -10.32 -4.63 - -9.53 -11.47 -8.18 - -10.85 -9.57 - - - - - - - - - - - - - - - - - - - - -7.43 -8.55 -7.33 -8.85 - -8.52 - -7.3 - -5.47 - - -7.15 - - - -11.43 - - -7.16 -7.42 -
- - - -0.81 3.22 - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -2.0 - - - - -4.11 - - - - -
- -9.52 -12.84 -4.14 3.72 - 5.48 -10.13 -3.2 -8.6 -10.03 -10.62 -12.94 - - -8.04 -10.25 -12.92 - -9.76 -11.28 - -11.33 -12.5 - - - -11.77 - - -10.44 - -13.04 - -9.98 - - - - - - -14.38 - - - - - -12.83 -8.26 - -12.18 - -11.92 -12.02 - - - -
- - - 2.24 2.85 - 5.51 -4.24 - - - - - - - - - - - - - - - - - - - - - - - -4.69 - - - - - - - - - - - - - - - - -1.74 - - - -7.18 - - - - -
- - - -10.91 4.24 -12.1 5.29 -10.42 -3.78 -11.64 -10.48 -10.57 -12.49 -13.04 -12.44 -10.26 - -12.97 - - - - -12.34 - -12.99 - - - - - - - -13.0 - - - - - - - - - - - - - - - -8.39 - - - -13.37 - - - - -
- - - - 2.79 - 5.39 - -7.16 - - - -3.99 0.92 -0.02 -0.38 -3.39 - - - - - - - -2.31 -3.68 - -4.81 -2.44 -3.82 - -6.61 -2.89 - - -0.23 - -2.65 -1.43 - - -3.75 -2.29 -1.39 -0.22 - - - -4.07 -4.04 -2.57 - -3.08 - -1.69 -2.42 -0.23 -
- - - 0.11 2.13 - 5.68 - - - - - - - - - - - - - - - - - - - - - -0.53 - - - -0.91 - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-4.9 -6.54 -4.19 -3.49 2.9 - 5.57 -9.74 -5.96 - - -7.73 -4.79 - -6.42 -6.55 -4.2 -5.46 - -6.63 -5.2 -4.97 -5.63 -6.47 -5.08 -4.27 -7.85 -5.84 -4.32 - -4.59 -4.97 -4.44 -4.14 -2.04 -3.69 -3.45 -4.33 -2.94 -2.16 -2.94 -3.22 -3.27 -2.91 - - - - -4.52 -1.08 -2.22 - -5.39 -5.15 - -6.52 - -
-1.98 -1.84 -2.41 -0.81 1.01 -9.24 5.26 -6.93 -6.32 -8.0 -7.46 -7.95 -2.07 -2.48 -1.88 -1.87 -0.89 -4.18 -1.47 -2.87 -1.01 - -0.34 -0.62 -0.69 -3.02 -6.91 -0.57 -1.19 -0.79 -0.53 -0.55 -0.86 -4.95 -1.59 -4.14 - -9.87 -6.92 -7.8 -6.33 -6.88 -6.48 - -4.55 -2.02 -5.77 -1.89 -2.18 -0.36 0.68 -1.18 -2.29 -1.78 -1.75 0.44 0.67 -2.63
- - - -3.85 1.83 - 5.33 -4.57 -4.04 -4.43 -5.17 -3.55 - - - - - -4.7 -2.09 - - - - -5.04 - - - - -3.82 - -4.13 -3.85 -3.52 -1.07 -2.25 - -0.91 -0.22 - -0.7 1.13 0.82 1.02 0.17 0.97 -1.29 -5.23 -4.67 -0.23 - - -3.79 -4.26 -3.86 - - - -
- - - - - - 5.73 - - - - - 1.41 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.21 - - - - - - - - -
-1.66 - -1.36 0.62 2.71 - 5.51 - - - - - - -5.13 - - -4.74 - -0.27 - - - - - - - - - -2.74 - -1.46 -2.51 -2.38 - - - - - -3.74 - - -4.62 - - - - - -1.19 -0.16 - - -1.65 -5.55 - - - - -
-0.03 -0.85 -0.75 1.6 1.03 - 5.29 - - -8.18 -8.29 - -0.61 -4.65 -4.5 - - -4.46 -0.2 -1.4 -2.79 -3.89 - -4.68 -4.61 -4.06 -3.99 -2.29 -3.67 -3.17 - -3.76 -3.88 - -2.06 -3.81 -2.04 -2.46 -1.37 -2.83 -2.96 -2.11 -2.33 - - -2.64 -4.83 -2.85 0.29 -0.93 1.64 -0.94 -3.24 -1.57 -5.45 -4.53 -1.6 -1.97
- - -5.87 -1.62 3.57 - 5.42 -8.49 -6.15 - - - -4.51 -2.28 -4.34 -5.17 -4.14 -2.17 - - - - -6.12 -6.24 - - - - - - - -6.29 - - - - -1.75 -2.87 - - - -4.31 -3.71 -2.66 - -3.65 -4.35 - -1.84 -6.31 -5.29 -3.56 -0.61 - -2.09 -2.32 - -
- - - - 3.94 - 5.39 -4.81 -4.29 - -6.05 - -4.12 - - - - - - -3.91 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -4.98 -1.27 -3.06 - -6.98 - - - - -
- -8.85 -9.39 -3.67 1.06 - 5.79 -10.63 -7.46 -11.33 -10.51 - -8.39 -11.25 - - -8.45 -9.3 - - -6.16 - -9.6 -7.1 -6.89 - - -6.08 -5.85 -5.49 -5.38 -4.17 -2.66 -5.5 -3.42 - - - - - - -12.8 -8.31 - - -9.49 - -9.04 -6.41 -9.21 -8.47 -10.27 -9.95 -10.1 - - - -
- -11.95 - -7.71 2.92 - 5.65 -9.52 -2.8 -10.23 -9.22 -10.27 -11.23 -12.16 -10.82 -7.14 - - - - - - -12.42 - - - - - - -12.29 - - -13.92 - - - - - - - - -14.96 - - - - -13.8 -11.64 -8.8 - - - -12.24 - - - - -
-1.55 -1.86 -2.31 -3.35 3.07 -7.32 5.31 -5.48 -3.42 -6.31 -6.47 -6.57 -1.29 -1.64 -1.4 -1.67 -2.59 -2.47 -2.79 -3.01 -3.03 -0.46 -3.5 -3.04 -3.1 -2.9 -2.07 -2.98 -2.6 -2.91 -3.18 -2.99 -3.03 -5.51 -2.58 -2.23 -2.87 -3.07 -2.8 -2.37 -2.95 -2.88 -2.6 -2.99 -2.19 -2.98 -4.72 -0.48 -0.81 -3.01 -2.83 -4.13 -3.57 -1.56 -1.83 -3.01 -3.97 -2.57
-7.84 -6.14 -3.6 -2.01 2.36 - 5.65 -7.32 -5.83 -5.47 -5.34 -4.89 -3.29 -5.27 -7.5 -6.06 -1.48 -4.32 -4.67 -3.47 -3.78 - -4.36 -4.19 -4.9 -8.25 -8.14 -4.17 -3.78 -3.98 -5.26 -4.68 -5.53 - - -7.02 - - - - - -8.09 - - - -2.74 -8.21 -1.85 -5.08 -5.73 -6.24 -2.37 -2.72 -5.78 -3.18 -6.64 -7.84 -4.98
- - - 1.52 3.93 - 5.08 - - - - - - - - - - - - - - - - - - - - 0.09 - - - -1.94 - - - - - - - - - -2.58 - - - - - - 2.09 - - - -1.86 - - - - -
- - - - - - 5.83 - - 0.16 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-8.16 -10.11 -10.11 -5.15 3.23 - 5.6 -9.97 -5.17 -10.72 -10.37 -13.63 -9.31 -11.01 -9.03 -9.31 - -11.21 -11.02 - -9.32 - -12.43 -10.07 -10.75 - - -8.02 -8.68 -8.61 -10.84 -9.53 -9.66 - -7.68 - -10.54 -10.65 - - -9.5 -10.9 -10.36 - - -12.42 -9.53 -11.64 -7.81 -11.17 - -12.47 -8.23 -12.49 - -11.75 - -
- - - 0.92 1.9 - 5.57 - - - - - 1.0 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.58 - - - - - - - - -
- - - - 1.77 - 5.48 - - - - - - - - - - - - - - 1.46 - - - -0.11 - - - - - - - - - - - - - - - - - - - - - - 0.65 - - - - 0.92 0.62 - - 0.25
-1.52 -1.28 -2.79 -3.66 3.55 - 5.45 -7.25 -2.4 -7.36 -7.25 -7.43 -6.77 -5.83 -8.47 -6.08 -6.86 -5.67 -2.01 -1.24 -8.72 -4.27 - -10.37 - -8.38 -9.75 - -8.19 - -8.7 -10.24 -7.92 - -6.27 - - - - - - -9.71 - - - -6.04 -9.82 -3.65 -6.84 -4.89 - -4.79 -6.12 -2.03 -4.01 -4.09 -4.7 -
-11.66 - -9.5 -2.92 3.85 -8.26 5.43 -6.89 -2.65 -6.68 -6.83 -6.81 -8.75 -8.12 -7.99 -6.71 -5.0 -8.05 - - -10.65 - - -12.89 -11.38 -10.63 -10.78 -10.71 -12.28 -10.83 -10.74 -10.54 -10.54 -7.66 -7.31 -9.82 -9.12 -8.9 -9.05 -9.55 - -8.5 -7.2 - -9.1 -12.3 - -12.85 -8.13 - -11.64 -11.97 -10.8 -9.89 -11.53 -10.46 -10.71 -
- - - -6.12 4.01 - 5.31 - -5.01 - - - -5.43 -9.34 - -8.11 -5.09 -5.98 - - - -3.99 - -8.07 -7.23 -7.07 - -8.3 -7.49 - -8.08 -6.63 -5.52 - -3.31 -3.94 - - - -6.35 - -6.08 - - -3.86 - - -2.81 -5.83 - -3.51 -7.62 -8.07 -3.01 -1.37 -2.19 -6.35 -0.85
-3.36 - -3.21 -2.5 3.39 -4.82 5.14 -5.16 -4.93 -3.2 -4.58 -3.31 -2.34 -4.06 -3.53 -4.32 -2.34 -2.06 - - - -1.19 -3.78 -3.8 -5.72 - -5.87 - - -4.71 -3.2 -4.04 -6.54 - - - - -3.47 - -2.3 -2.32 -4.94 -3.33 -2.29 - -0.19 -4.86 -2.73 -1.32 0.92 1.26 - -3.36 -0.85 - -2.32 0.81 -0.67
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.