Heatmap: Cluster_144 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
- - - - 0.8 - - - - - - - - - - - 3.01 1.72 - - - - - - - - - - - - - - - - - 1.02 - - - - - - - - - 3.2 -1.19 2.46 - - - 1.86 4.46 1.03 - - - -
- -0.25 -0.94 -0.7 0.4 - - - - - - - 0.23 - - - - - - 0.18 - - 0.36 -0.43 1.2 2.06 - 0.85 - - -0.82 0.95 -0.38 - - 0.48 2.82 1.75 3.25 2.83 - 0.4 2.9 - - - - - 0.41 - - - -1.95 - - - - -
- - - - - - - 0.9 1.99 - - - - - - - 3.88 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.95 - - - 1.83 - 4.21 - - -
- - - - 2.79 - - 2.61 - - - - - - - - - - - - - - 3.28 - - - - - - - - - - - - - - - - - - - - - - - - - 5.1 - - - -0.18 - - - - -
-1.36 -1.14 -1.78 -4.43 -3.95 - -6.75 - -11.59 - - - -2.16 -0.12 -0.36 0.13 -2.63 -0.63 -3.94 -2.0 -2.23 -4.62 -3.43 -1.55 -0.65 -1.3 -3.05 -3.04 -1.21 -3.17 -4.98 -3.03 -2.16 -5.68 -1.27 -2.8 -1.95 -2.6 -2.31 -1.01 -2.21 -1.7 -0.85 -1.99 -2.11 1.84 1.08 1.26 4.64 -4.7 -3.13 -0.54 -0.24 -0.27 0.77 2.12 0.36 1.86
- 1.1 -1.44 -0.41 -1.07 -2.16 -1.65 -2.92 -3.5 - - - 0.87 0.38 0.13 -0.26 0.74 -2.56 - - 0.5 -1.92 2.21 1.28 0.55 -1.91 0.25 -0.09 1.76 1.16 2.08 1.06 0.64 - -0.37 0.24 - - - - - -1.98 - - - - -0.38 0.99 1.11 0.49 - 0.78 -1.43 -1.98 1.19 1.96 1.3 0.04
1.76 1.51 2.14 2.5 1.43 - 1.35 - - - - - 2.32 -1.81 - - - -0.57 - - 1.17 1.49 -0.76 -1.9 -0.34 - - - - 0.94 -0.06 0.03 - - 1.13 - - 0.17 - 0.87 - -1.46 1.51 - - -0.08 - - 2.25 -1.1 2.16 - -0.08 - - - - -
-5.0 -5.03 -0.53 -0.77 -3.4 - - - - - - - -0.99 -2.38 -1.42 -1.73 0.29 1.2 0.14 -1.59 -2.24 1.51 -3.85 -2.41 -1.78 1.34 -2.3 -2.95 -1.26 -3.17 -5.89 -3.51 -2.1 - -2.24 - - - - -2.87 -2.37 -4.31 - - -2.42 2.42 4.27 -1.99 -6.12 - - 2.4 3.44 -3.35 -0.13 - - -
2.6 - - - 2.09 - - - - - - - 1.36 0.31 - -0.41 - 0.38 2.57 2.27 - - - -1.0 - - - - 0.4 - - - - 3.89 - - - - - - - 0.89 - - - 1.23 - 1.95 1.33 - - - -2.84 - 1.9 - - -
-0.58 0.93 -0.42 1.02 -0.99 -3.9 -2.03 -2.32 -2.15 -3.15 -3.08 -3.07 -0.5 -0.77 -1.09 -0.9 -0.59 -0.57 -0.16 1.72 -0.13 0.34 -0.29 -0.13 0.06 1.39 -0.35 -0.15 0.64 0.04 -0.35 0.37 0.76 0.11 0.19 0.51 -1.49 -0.57 -1.02 -0.47 0.07 0.08 -1.48 -1.29 0.87 1.16 -2.24 1.65 0.55 -0.25 -0.45 -1.58 -0.33 1.11 1.44 0.34 -0.64 -1.01
- -0.12 1.24 2.06 3.75 - - -1.61 - -2.72 -1.37 -0.44 1.44 -0.35 - -0.81 - 0.48 2.26 2.28 - - - - - - -1.07 - - - - - - - - - - - - - - - - - - 0.75 -0.72 - 1.09 - - 3.05 2.02 - -0.01 1.07 - -
-0.72 -0.33 0.72 -1.92 -5.06 -5.39 -5.03 -4.81 -5.13 -5.11 -5.06 -5.2 1.61 -0.44 0.21 0.18 -0.16 0.77 0.9 0.87 -0.0 1.65 -0.19 0.21 0.15 0.13 1.74 0.19 0.43 0.19 0.25 0.31 0.07 -2.85 -0.27 -0.47 -1.17 -0.94 -1.2 -0.58 -0.74 -0.82 -1.16 -1.72 -0.42 -0.18 0.32 1.45 1.35 -0.18 -0.33 0.07 -0.0 0.18 -0.42 0.21 -0.16 0.83
0.49 -0.17 0.05 -0.63 -2.44 -9.37 -4.82 -8.09 -6.67 -8.46 -8.69 -8.88 -0.5 -0.95 -0.67 -0.44 0.11 0.06 -0.5 -0.57 -0.21 1.81 -0.86 -0.56 -0.52 -0.01 0.69 0.1 0.18 0.06 0.01 0.14 -0.14 -4.28 0.06 0.05 0.91 0.71 0.77 1.06 0.48 0.53 0.86 0.69 0.19 0.29 1.62 0.66 1.48 -0.35 -0.23 0.95 0.23 -0.61 -1.24 -2.71 -2.14 -0.35
- - - - - - - - - - - - 4.67 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.03 - - - - - - - - -
-4.15 -3.76 -1.0 -0.03 2.41 -6.15 0.48 -6.02 -6.13 -5.38 -5.45 -5.39 -1.62 -1.11 0.38 0.32 -1.41 -1.56 -1.61 2.14 -0.2 -2.49 -1.96 -0.49 -0.89 -0.18 -0.13 -0.04 -0.78 -0.16 -1.67 -0.37 -0.3 -2.27 -1.11 -2.52 -4.59 -4.04 -4.73 -5.19 -4.95 -3.8 -4.74 -4.5 -2.51 3.77 -0.53 0.96 -1.4 -1.02 -0.62 -0.02 1.42 -1.12 2.24 1.63 -2.19 -0.42
- - - 1.47 - -0.94 - - -4.2 - - - -0.87 - - - - -2.87 - - - - - - - - -2.34 -2.29 -2.06 - - -4.56 - - - - 3.23 3.14 2.53 2.41 1.21 2.34 1.89 3.06 0.77 -0.94 - 0.59 -2.54 - - - -0.96 - - - -2.47 -
- - - 3.11 - - - - - - - - - -1.18 - - 1.53 - - -0.05 - - - - - - - - - - - - - - - - - - - - - - - - - 3.31 4.69 0.56 - - - 1.42 2.39 - - - - -
- - - 1.23 1.21 - 1.42 - - - - - - - - - -1.75 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.35 3.98 1.27 0.46 - - 3.95 3.68 - - - - -
- - -0.24 -2.56 - - - - - - - - - - - - 2.22 1.47 0.98 0.69 - - - - - - - - - - - - - - - - - - - - - - - - - 2.66 4.25 -0.33 - - - 2.91 3.55 - - -0.76 - -
- - -1.7 0.08 - - - - - - - - - -1.67 - -1.72 1.66 1.63 - 0.66 - - - - - -1.64 - -2.45 - - - - - - - - 0.24 - - - - -2.94 0.27 - 0.12 -0.03 4.67 1.02 -2.48 -1.21 1.29 2.0 2.55 -0.03 - 0.4 -1.4 -
- - -1.59 5.04 -1.6 - - - - - - - -3.42 - -1.99 -3.94 -2.5 -0.88 - - - - - - - - -1.06 - -2.24 -2.3 -3.04 -2.61 - - - -1.24 - -0.62 - - - -5.01 - - - - 2.04 1.81 - -3.12 0.72 2.33 0.65 -0.5 - - - 2.16
- - - 0.44 - - - - - - - - - - - - -0.87 0.32 - -0.36 - - - - - - - - - - - - - - - - - - - - - - - - - -0.79 3.89 1.16 -1.3 - -0.68 4.12 3.99 1.06 - - - -
- - - 1.39 - - - - - - - - -1.98 - - - 1.44 -0.14 - - - - - - - -1.0 - -1.81 - - - - - - - - - - - - - - - - - -0.33 3.39 1.63 - - - 4.56 3.68 - - - - -
- - -1.0 1.2 - - - - - - - - - - - - 2.66 - - - - - - - - - - - - - - - - - - - - - - - - -2.95 - - - 3.07 3.57 2.43 -0.36 - - 3.52 3.07 1.27 - - - -
- - -2.81 - - - - - - - - - - - - - - -0.47 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.22 4.28 1.39 -1.89 - - 3.46 4.36 0.03 - - - -
- - - 0.99 - - - - - - - - -2.51 -2.93 - - 0.41 0.51 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.75 5.01 -1.01 - - - 2.39 3.54 - - - - -
- - -1.25 -0.79 - - - - - - - - -1.84 - -1.5 -1.45 0.68 1.76 - -0.62 - - - - - - - -2.5 -2.56 -2.9 - - - - - - - - - - - - - - - 3.27 3.23 0.1 -2.29 - - 3.65 4.06 -1.42 - - - -
2.76 - - 4.66 3.3 - - - - - - - 3.39 - - - - 0.71 - - - - - - - - - - - - - - 1.3 - - - - - - - - - - - - - - - - - - - 0.51 - - - - -
- - - - - - - - - - - - -0.87 - - -1.75 2.28 - - - 1.21 - 1.84 0.75 1.24 2.6 - 2.45 2.79 1.65 1.38 1.85 1.59 - 1.75 - - - - - - -1.09 - - - 0.81 -0.55 -1.1 -0.06 0.69 - - 0.31 -0.02 - - - -
- - 1.74 2.86 - - 3.48 - - - - - -1.62 0.11 - - 2.99 -2.54 - - - 2.01 - -1.15 - 0.36 -1.96 - -1.03 - - - -0.81 - - 0.16 - - - - - -3.33 - - - -1.65 1.43 0.73 - - -0.2 2.56 2.71 -1.05 - - - -
- - - 5.19 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.42 - - - - - - - - -
- - - 4.13 - - - - - - - - - - - - 2.43 - - - - - 2.32 - 0.21 - - - - - 2.22 1.89 0.75 - - - - - - - - - - - 3.62 - - - 2.63 - - - -1.57 - - - - -
-1.09 -3.33 -1.53 -1.4 -9.08 - -8.78 - -10.37 -10.23 - - -2.02 -1.48 -2.11 -2.2 -1.25 -0.18 -2.82 -2.84 0.84 -1.22 -0.6 -0.08 0.5 1.2 1.55 0.76 1.3 1.01 -0.06 0.9 1.7 -1.1 2.73 1.04 -0.62 -0.19 -0.4 0.06 -0.04 -0.14 0.13 -0.21 0.17 0.47 -0.29 1.6 -2.45 -2.1 -2.94 0.74 0.52 -0.96 1.86 -1.59 -8.78 -0.88
0.56 2.13 -1.15 1.02 - - - - - - - - 1.55 -2.11 - - - - - 1.74 - - -0.18 -0.09 0.7 2.64 1.41 0.83 0.4 0.34 1.09 -0.56 1.87 - - - - 1.51 - 0.39 - -1.4 1.1 - 1.08 2.33 - 0.8 1.45 - - - 0.78 - - - - -
- - - 0.72 - - - - - - - - 0.98 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.62 1.51 4.55 -0.05 - - 3.15 2.58 - - - - -
- - - 4.83 - - - - - - - - - - - - 1.38 0.94 - - - - - - - - - - - - - - - - - - - - - - - -1.67 - - - 1.11 -0.62 2.39 - - - 3.22 2.89 - - - - -
0.57 -0.81 0.15 3.3 2.58 1.05 0.04 0.73 1.34 1.13 1.12 0.87 0.12 -3.02 -2.38 -2.15 1.4 1.41 1.14 0.25 -1.15 - -0.78 -2.22 -3.07 -2.63 -1.42 -1.22 -4.3 -1.27 -1.13 -2.87 -0.83 - -1.28 -0.67 - -2.23 - - - -2.77 - - - 1.11 -2.94 0.9 -0.8 -1.54 -0.47 -2.49 0.57 1.14 - -2.47 - -
0.75 -0.14 1.47 -3.75 -2.62 - - -9.47 - - - - 0.32 -1.01 -2.78 -2.7 0.98 -1.35 2.04 1.08 -0.71 - 1.46 0.77 -1.5 -5.28 -6.22 -1.0 -5.44 -2.91 -4.19 -4.4 -4.11 -5.34 -7.53 -8.14 - - - - - -9.64 - - - 0.55 2.7 -0.32 -2.57 1.91 0.62 3.06 2.51 0.5 1.78 -4.01 -8.82 1.16
0.09 -2.49 -1.6 -1.58 -2.98 - - - - - - - -1.57 -0.68 -3.34 -1.99 1.84 1.31 -0.25 1.2 - 3.26 - -2.36 -3.32 -1.11 -2.32 - -4.58 - - -2.52 -3.94 - - - - - - -1.33 - -3.52 - - - 3.23 1.85 0.35 0.64 - -1.06 2.77 2.78 2.06 - - - -
-2.44 -1.75 - -0.51 -0.55 - - -6.08 - - - - - -2.03 - - 1.82 1.28 - - - -2.5 - - - - -3.34 - - - - - -3.64 - -0.23 -1.81 - - -0.08 - - -3.42 - - - 0.91 4.83 -2.3 -0.77 - -3.23 2.84 2.99 -0.93 -1.3 - -2.7 -
0.1 0.43 -1.12 -0.85 -5.28 - - - - - - - -0.34 -1.51 -0.16 0.15 -0.31 -1.09 -3.57 -2.79 -4.13 -0.1 -1.75 -1.97 -2.38 -1.83 -2.63 -2.58 -2.71 -2.27 -0.51 -1.8 -2.01 - -1.24 -1.88 - -1.09 - -2.75 0.7 0.29 -3.14 - 1.78 -0.82 -2.69 1.4 3.68 1.52 3.42 -4.58 -1.65 2.71 -1.02 -4.78 -3.33 -0.07
-0.64 0.33 0.15 1.56 -6.02 - -5.74 -9.33 - - - - -0.11 -3.02 -3.85 -3.47 0.85 -0.25 -0.14 2.25 0.87 0.63 0.98 0.9 0.91 0.56 -0.33 0.9 1.3 1.08 0.99 1.29 1.49 -0.06 1.1 0.34 -1.7 -0.89 -2.36 -0.33 -0.25 -0.67 -1.04 -0.45 -0.32 -1.7 -1.84 -1.76 1.27 0.08 0.47 -1.43 -0.82 -0.65 -5.14 - -6.63 -1.41
- - -0.84 - - - - -2.68 - - - - - - - - - 0.37 - - - - - - - - - - - 0.85 - - - - 3.17 - - - 4.12 1.47 3.12 2.22 2.26 - - - - - 2.26 - - - 0.05 0.13 - - - -
-9.96 - -11.12 -6.71 -5.41 - -7.82 - - - - - -8.15 -6.2 -5.19 -5.16 -9.12 -6.82 - - -7.47 2.4 - -6.84 -3.14 -1.59 0.23 -8.24 -1.33 -7.84 - -9.51 -4.92 -8.36 -2.49 -2.66 -1.57 -2.44 -2.99 -1.65 -1.91 -1.67 -1.91 -0.89 -2.72 -6.86 - 1.41 4.51 - - - -3.05 4.46 - - - -5.04
- - 0.32 1.91 - - - - - - - - 0.44 0.07 -1.5 -0.57 - -0.77 - - 0.46 1.74 - -1.71 0.33 - -1.32 0.59 2.32 1.29 - -1.87 -0.92 1.38 0.2 -0.19 0.49 - - 2.45 - -0.17 2.26 - - - -1.77 1.43 -2.15 -0.46 2.22 -1.34 -1.13 2.4 - -0.67 - -
-0.87 -0.86 -0.94 1.78 - - - -5.31 - - - - -0.16 -2.14 -0.78 -0.88 - -1.57 0.17 - 0.6 2.26 - -0.68 -0.24 0.13 0.05 0.51 2.1 1.04 - -0.78 -0.49 - - 0.44 1.2 0.46 - 1.97 0.69 0.41 -0.32 - 0.73 0.42 - 0.96 0.13 1.8 2.12 - 0.27 1.11 - -1.57 - -
- - - - - - 3.37 - - - - - - - - - - - - - 0.95 - 1.11 2.36 1.38 1.61 - 0.94 1.7 - 2.19 2.82 2.57 - - - - - - - - - - - - - - - 3.1 - - - 0.56 - - - - -
- - - - - - - - 0.28 - 0.12 - - 0.72 - - - - - - - - - 1.97 1.62 - - - 1.33 - 1.79 -0.08 3.22 - 4.07 - - - - - - 1.1 - - - - 1.7 - 2.26 - - - 1.94 - - - - -
- - - - - - - - - - - - - - - - - -2.05 - -0.14 - - - - - - -2.99 - - - - - - - - 1.43 - - - - - 1.41 - 0.94 2.9 -2.35 - 3.71 1.76 - - -0.84 0.71 4.37 - - - 1.29
- - - -0.59 - - - -1.2 0.39 -4.47 -2.66 -3.65 -1.51 -1.38 - -1.23 - 0.08 - - - - - - - - - - - - - - - - - 1.51 - - - - - 0.54 - - 2.44 - - 3.55 3.0 - - 2.58 2.17 1.83 - - - 3.26
-5.29 - - 0.49 1.57 2.48 2.03 3.56 2.81 2.43 2.59 2.45 -4.57 -0.27 -2.14 0.55 1.34 1.23 -3.71 - - - - - - - -6.03 - -4.72 - - - -7.15 - - - - -4.44 - - - -7.67 - - - - -6.68 -3.48 -1.14 - - -4.08 -4.17 - - - - -
- - 0.47 2.6 4.07 - 0.14 - - - - - -0.11 - - - -0.42 -1.69 - - 0.12 - 0.31 -1.57 -1.44 - -1.1 -0.8 0.51 0.97 -0.46 1.63 0.5 - 2.41 - - - - - - -2.39 - - - - - 1.64 2.34 - 0.2 - -0.83 - - 1.39 - -
- - - - - - - - - - - - 3.62 - - - - - - - - - - - - - - - - - - - - - - - 5.09 - - - - - - - - - - - 3.54 - - - - - - - - -
- - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 3.32 - - - - - - - - - - 2.4 - - - - - - - - - - - 1.47 - - - - - - - - - - - - - - - - - - - - - - - 5.23 - - - 1.22 - - - - -
- - - 1.34 - - - - - - - - 1.93 - - - - - - - - - 0.83 1.62 0.68 4.27 1.76 - - 1.15 - 1.22 1.34 - - - - - - 2.38 - 0.22 2.89 - - - - - - - - - 0.77 - - - - -
- - - 4.0 - - - - - - - - - - - 1.05 3.89 - - - 1.0 - - - -1.13 - 2.55 - - - - - - - - - - - - - 3.06 -0.34 - - - - - - 2.92 - - - -2.85 - - - - -
-0.61 -2.31 0.14 0.11 -5.3 - -5.01 -9.21 -4.12 - - - -2.3 -3.23 -3.66 -3.07 -1.83 -1.09 -1.94 -2.99 -2.85 0.07 -2.07 -3.04 -4.04 -1.52 -2.01 -2.18 -3.54 -2.94 -2.05 -2.94 -3.49 -1.83 -1.2 0.73 2.0 1.76 1.78 1.96 0.59 1.65 3.31 2.31 0.73 -0.2 -0.18 0.3 2.23 0.28 0.1 -2.72 -1.48 -0.45 -3.49 - -2.94 -1.2
- - - -0.49 - - - -4.92 -2.12 0.62 0.34 0.64 -0.58 - - - -2.28 3.34 - - - - - - - -0.79 - - -3.09 -2.29 -1.79 -0.64 0.9 - 0.66 -1.33 1.71 1.47 2.04 1.54 - 1.08 - - 0.5 - - 3.56 1.34 - - - 1.91 -0.01 -1.59 - - -
2.48 2.18 -0.63 1.16 -0.46 -1.62 1.58 - -2.64 -4.19 -3.14 -4.15 -0.98 - - - - - 0.86 1.8 - - - - - -1.38 -3.31 - - - - - -1.97 - - -1.2 - - - - - -2.51 - 0.63 -0.37 - 0.73 0.49 4.43 -0.99 -2.0 1.39 -3.6 0.37 - - -0.04 -0.28
-2.55 - -0.74 0.79 - -1.29 -0.54 - -1.9 -0.25 -1.86 -0.56 -2.1 - - - - 2.81 -1.43 - - - - - - - - - - - -2.27 -1.16 0.29 - -1.29 -1.9 0.6 0.63 0.09 2.01 - 0.26 1.16 0.13 - 4.31 - -0.66 0.87 - - - 2.66 -1.74 -2.39 -2.16 -2.52 -
- 1.17 0.42 3.41 - - - - - - - - 2.4 1.27 0.37 2.03 - 1.68 2.31 - - - - - - - - - - - - -0.62 - - - - - - - - - -0.29 - - - - - - 3.71 - - 2.46 1.3 - - - - -
- - - - - - - - -1.53 - - - - 1.94 - - - 0.12 - - - - - - - - - 0.44 - - - -0.36 - - - - - - - - - - - - - - - 3.97 2.07 - - - 2.0 4.74 - - - -
- - - 0.84 - - - -1.33 -1.83 - - - 1.15 - - - - - - - - - - 1.4 1.39 3.36 - 2.77 - - - 1.83 0.56 - - - - 1.94 3.9 - - -1.45 - - - - - - 0.14 2.42 - - -1.6 - - - - -
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.