Heatmap: Cluster_136 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.47 0.16 -0.14 -0.23 -0.39 -0.39 0.22 0.15 0.32 0.44 0.63 0.78 -0.33 -1.29 -0.7 0.04 0.02 -0.52 0.66 - -3.03 -2.99 0.03 -0.11 -2.89 0.57 -0.51 -0.42 1.08 1.18 0.43 -0.08
0.56 0.57 0.49 0.5 0.55 0.52 0.27 0.61 0.53 0.57 0.54 0.5 -1.8 -1.97 -2.03 -0.87 0.11 -0.96 0.33 -6.66 -3.96 - 0.06 -0.17 -0.92 0.12 0.09 0.52 0.67 0.78 -0.68 -0.83
0.01 -0.01 0.11 0.42 0.31 0.36 0.59 0.51 0.73 0.59 0.53 0.33 -0.62 -0.77 -1.06 -0.37 0.4 -0.36 -0.27 -6.05 -4.52 -8.58 0.26 0.11 -2.89 0.56 -0.08 -0.04 0.14 0.1 0.42 0.54
0.06 0.08 0.21 0.3 0.68 0.5 0.59 0.72 0.78 0.72 0.38 0.39 -0.34 -0.61 -0.43 -0.7 0.06 -0.35 0.12 -7.89 -5.31 -4.27 0.15 -0.12 -3.84 -0.6 0.2 -0.08 0.43 0.46 -0.01 -0.01
-0.07 -0.21 0.16 0.26 0.27 0.24 0.75 0.79 0.86 0.75 0.56 0.39 -1.0 -1.28 -1.55 -0.81 0.38 -0.16 0.25 - - - -0.13 -0.53 -5.54 0.48 0.23 0.54 0.4 0.64 0.06 0.01
0.14 0.27 -0.0 0.04 -0.04 -0.13 0.11 0.03 0.54 0.49 0.53 0.17 -0.09 -0.54 -1.03 -0.02 0.34 0.17 0.21 -7.83 -1.44 -2.97 -0.29 -0.21 -0.29 0.83 0.25 -0.13 0.17 0.08 0.33 0.34
0.14 -0.14 -0.23 0.03 0.04 -0.05 0.03 0.13 0.39 0.3 0.28 0.26 -0.53 -0.16 -0.47 0.42 -0.09 -0.38 0.45 -2.86 -1.89 -3.34 0.49 0.61 -0.69 0.48 0.12 0.23 0.03 0.35 0.21 0.23
0.5 0.53 0.63 0.59 0.56 0.43 0.22 0.5 0.61 0.49 0.5 0.33 -3.94 -3.18 -2.43 -1.87 0.04 -0.08 0.86 -0.4 0.18 -0.51 0.09 -0.17 -0.75 -0.68 -1.16 -1.09 0.2 0.12 -0.24 -0.18
0.0 -0.02 0.19 0.06 -0.01 0.04 0.14 0.27 0.54 0.61 0.75 0.53 -0.9 -1.1 -0.76 -0.43 0.3 -0.58 0.86 -4.5 -1.93 -2.89 -0.28 -0.32 -0.35 0.61 0.08 0.25 0.43 0.5 -0.1 0.0
0.64 0.23 -0.04 0.03 0.14 -0.0 -0.04 0.26 0.25 0.36 0.23 0.36 -0.72 -0.52 -0.52 0.19 -0.58 -0.27 0.22 -1.9 -3.27 -2.68 -0.09 -0.11 -0.47 1.39 0.36 0.33 0.06 -0.08 0.19 -0.18
0.73 0.2 0.01 0.1 0.07 -0.07 0.16 0.14 0.22 0.41 0.5 0.63 -1.82 -1.65 -1.75 -0.2 0.03 -0.25 0.56 -1.36 -0.21 -2.14 0.47 0.48 0.08 -0.08 -0.39 -0.38 0.58 0.54 -0.24 -0.46
0.02 -0.16 0.08 0.29 0.38 0.27 0.57 0.83 1.16 1.04 0.85 0.9 -1.05 -1.2 -2.22 -0.6 0.34 -1.1 -0.56 -3.67 -5.4 -5.97 0.2 0.1 -1.33 -0.23 -0.14 -0.06 0.61 0.61 -0.37 -0.75
0.27 0.04 -0.14 -0.02 -0.28 0.25 0.51 0.35 0.56 0.73 0.3 0.57 -0.24 -0.75 -0.9 -0.16 -0.09 -0.1 0.44 -4.63 -3.58 - -0.03 0.02 -0.17 0.69 0.05 0.02 0.27 0.43 -0.04 0.03
0.02 -0.16 -0.13 -0.09 0.62 0.59 0.3 0.42 0.99 0.94 0.72 0.43 -0.62 -1.43 -1.0 -0.47 0.8 0.49 -0.01 -7.23 - - -0.17 -1.28 0.05 -0.45 -0.64 -0.25 0.38 0.52 0.31 -0.33
-0.2 -0.28 -0.04 0.07 -0.16 0.11 0.12 0.35 0.38 0.21 -0.21 -0.08 0.59 -1.87 -1.59 -0.63 0.29 0.33 0.28 - -4.28 -4.41 0.39 0.04 -0.05 0.82 0.82 0.79 0.52 0.39 -0.25 -0.02
0.12 0.07 0.0 0.18 0.21 0.31 0.42 0.48 0.67 0.75 0.59 0.4 -0.01 -0.17 -1.41 0.33 0.05 -0.02 0.14 -6.39 -2.44 - 0.23 0.02 -1.9 -0.9 -0.88 -0.9 0.55 0.53 0.36 0.49
0.47 0.22 -0.01 -0.01 0.16 -0.07 0.06 0.3 0.19 0.46 0.43 0.3 0.02 -0.6 -1.67 0.04 -0.26 -0.59 0.25 -3.39 -3.36 -5.5 0.03 0.16 -1.19 1.06 0.25 0.06 0.44 0.29 0.49 0.3
0.05 -0.03 0.15 0.15 0.07 0.13 0.12 0.28 0.33 0.25 0.29 0.07 -0.45 -0.02 -1.05 0.03 0.19 -0.45 0.65 -3.17 -1.8 -3.33 0.02 -0.12 -0.15 0.57 0.33 0.44 0.38 0.42 -0.21 -0.0
-0.02 0.11 0.27 0.31 0.3 0.42 0.53 0.47 0.59 0.67 0.41 0.38 -0.82 -1.12 -0.7 -0.79 0.27 -0.32 -0.4 -4.56 -1.34 -3.46 -0.28 -0.31 -1.65 0.1 -0.21 -0.12 0.17 0.27 0.7 1.06
0.28 0.28 0.27 0.06 -0.04 0.08 -0.05 0.21 0.29 0.41 0.5 0.38 -0.56 -1.09 -0.54 0.24 0.0 -0.6 0.3 -1.98 -0.42 -1.33 0.49 0.66 -0.79 0.52 -0.52 -0.2 0.17 0.24 -0.15 -0.28
0.33 -0.0 0.02 0.23 -0.0 0.06 0.05 0.43 0.21 0.41 0.32 0.18 -0.59 0.29 -2.43 -0.09 -0.25 -0.2 0.5 -7.47 -3.98 - 0.1 -0.1 -1.1 1.29 0.71 0.52 0.21 0.04 -0.04 -0.1
0.44 0.19 0.23 0.14 0.08 0.17 0.22 0.38 0.44 0.47 0.45 0.43 0.04 -0.92 -0.78 0.74 -0.02 -0.16 0.99 -3.94 -3.55 -5.4 -0.18 -0.16 -3.78 0.43 -0.74 -0.53 0.79 0.81 -0.62 -0.69
-0.09 -0.12 0.17 0.27 0.28 -0.05 0.17 0.14 0.51 0.47 0.39 0.19 -0.39 -0.8 0.12 -0.41 0.05 -0.63 0.38 -6.97 -0.32 -5.01 -0.28 -0.29 0.21 0.17 0.37 0.64 0.18 0.25 0.01 0.04
0.08 0.01 0.26 0.12 0.47 0.45 0.56 0.51 0.72 0.39 0.31 0.19 -1.0 -0.62 -1.0 -0.32 0.47 -0.31 -0.09 -5.05 -0.72 -4.3 0.32 0.24 -1.87 0.3 -0.35 0.28 0.38 0.45 -0.09 -0.25
0.47 -0.2 -0.05 0.28 0.21 0.34 0.45 0.87 0.58 0.83 0.8 0.65 0.31 -0.24 -1.15 -0.11 -0.39 0.23 0.18 - -2.2 - -0.22 -0.43 -2.16 -0.57 -0.41 -0.49 0.13 0.24 0.1 0.38
0.27 -0.01 0.21 0.28 0.37 0.11 0.8 0.49 0.73 1.13 0.91 0.54 -0.05 -1.18 -0.88 -0.11 0.04 -0.17 -0.06 -4.83 -2.05 -3.36 -0.23 -0.11 -2.11 -0.97 -0.66 -0.53 -0.15 -0.25 0.62 0.58
-0.01 -0.14 -0.0 0.05 0.24 0.16 0.28 0.54 0.47 0.47 0.32 0.13 0.36 -1.67 -1.95 0.21 0.45 -0.19 0.28 - -3.78 -7.53 0.29 -0.39 -1.14 0.69 0.61 0.83 0.78 0.65 -1.04 -1.61
0.58 -0.1 -0.68 -0.31 -0.48 -0.02 0.33 0.37 0.31 0.43 0.58 0.7 -4.03 -4.52 -3.64 -2.26 0.72 0.78 0.94 -2.1 -4.5 -3.76 0.9 0.5 -0.84 -0.03 -0.59 -0.28 0.92 0.91 0.37 -0.35
0.22 0.14 -0.15 0.14 0.42 0.39 0.74 0.77 0.65 0.71 0.65 0.53 -0.65 -3.99 -1.45 -0.08 0.12 0.52 0.25 -3.74 -5.34 -4.11 0.1 -0.23 -6.36 -1.07 -0.16 -0.08 0.47 0.42 0.59 0.17
0.0 -0.18 0.01 0.26 0.42 0.4 0.29 0.52 0.44 0.74 0.47 0.38 -0.31 -0.67 -0.1 -0.0 0.08 -1.3 0.19 -4.25 -3.24 -4.09 0.01 -0.18 0.29 -0.05 0.35 0.48 0.34 0.25 -0.39 -0.49
-0.1 0.17 0.17 0.44 0.44 0.57 0.75 0.5 0.7 0.68 0.39 0.09 -0.66 0.12 -0.43 -0.07 0.11 -0.33 -0.1 -5.2 -3.83 -3.82 0.25 0.01 -3.91 -0.28 -0.09 0.06 0.51 0.57 -0.35 -0.39
0.72 0.01 0.01 -0.28 -0.23 -0.49 -0.67 0.4 0.43 0.89 0.62 0.66 0.82 -2.41 -2.99 0.71 -0.49 -1.4 0.21 -5.05 -1.61 -4.29 -0.79 -0.52 -0.74 1.76 -0.41 -0.63 0.27 0.02 0.49 0.05
0.18 0.19 -0.0 0.03 -0.02 -0.07 -0.11 0.27 0.42 0.78 0.63 0.74 -0.09 -0.56 -0.61 -0.23 0.23 0.02 0.08 -2.69 -1.37 -5.83 -0.13 -0.22 0.1 0.97 -0.37 -0.1 0.15 0.26 -0.31 -0.27
-0.16 -0.42 -0.32 -0.11 -0.17 -0.4 -0.05 0.6 0.67 0.79 0.54 0.48 0.49 -2.2 -2.69 0.58 0.1 -2.03 0.13 -3.18 -3.49 -0.84 0.23 0.6 -0.88 0.86 -0.35 -0.22 0.38 0.33 0.23 0.58
0.18 -0.43 -0.07 -0.47 -0.64 0.37 0.45 0.38 0.52 0.85 0.84 0.3 -1.62 -1.84 -0.16 -1.36 -0.58 -2.44 -0.08 -6.23 - - 0.43 -0.16 -2.64 1.02 0.93 0.89 0.91 0.57 0.63 -0.37
0.45 0.46 0.39 0.12 0.27 -0.23 0.59 0.5 0.63 0.67 0.49 0.28 -0.65 -2.41 -2.33 -0.72 -0.23 -0.81 0.98 -5.83 -4.72 -7.26 -0.05 0.09 -4.64 0.46 0.2 0.19 0.44 0.43 0.47 0.29
-0.1 -0.15 -0.07 -0.33 -0.06 0.15 -0.26 0.12 0.47 0.2 0.32 0.2 -0.06 -1.47 -1.42 0.53 0.3 0.11 0.28 -7.09 -4.67 - 0.56 0.59 -1.73 1.04 0.62 0.97 0.53 0.55 -0.83 -1.07
0.19 -0.15 0.26 0.1 0.0 0.09 0.34 0.57 0.34 0.43 0.42 0.3 -0.31 -0.56 -0.54 -0.14 -0.09 -0.36 0.1 -1.34 -1.94 -2.38 -0.1 -0.39 -0.78 0.59 0.67 0.87 0.37 0.39 -0.94 -0.66
0.18 0.25 0.13 0.47 0.44 0.41 0.37 0.38 0.41 0.37 0.17 0.3 -0.64 -0.22 0.17 -0.43 0.0 -1.22 -0.19 -3.71 -1.94 -3.38 0.01 -0.08 0.51 0.1 0.37 0.34 0.05 -0.14 -0.08 -0.08
0.19 0.1 0.21 0.3 0.15 0.35 0.6 0.74 0.62 0.67 0.44 0.55 -1.24 -0.77 -1.15 -1.07 0.07 -0.46 -0.0 -5.12 - - -0.26 -0.53 -6.49 0.62 0.56 0.55 0.52 0.34 0.33 0.21
-0.28 0.15 0.21 0.39 0.66 0.32 0.74 0.81 0.82 0.92 0.58 0.55 -0.63 -0.26 -0.94 -0.92 0.21 -0.79 -0.24 - - - 0.27 0.16 -5.11 -0.39 0.39 0.52 0.1 0.07 -0.38 -0.19
0.04 0.15 0.15 0.31 0.37 0.53 0.65 0.83 0.73 0.6 0.59 0.41 -1.51 -0.87 -0.93 -1.13 0.12 -0.02 -0.33 -5.61 -3.04 -6.54 0.08 -0.01 -0.94 -0.12 0.16 -0.07 0.28 0.19 0.66 0.01
0.29 0.35 0.25 0.31 0.48 0.57 0.37 0.37 0.46 0.43 0.5 0.03 -0.99 -1.39 -1.39 -0.65 0.53 0.21 0.37 -7.54 -4.08 - -0.01 -0.12 -2.23 -0.37 0.12 0.33 0.63 0.6 0.2 0.21
-0.1 0.16 -0.04 0.1 0.15 0.69 0.78 0.53 0.58 0.71 0.26 0.39 -1.54 -1.07 -0.62 -1.17 0.28 0.5 0.09 - -6.99 - -0.1 -0.63 -2.06 -0.25 0.28 0.27 0.49 0.57 0.44 0.53
0.34 0.41 0.32 0.3 0.26 0.27 0.24 0.23 0.18 0.12 0.05 0.11 -1.32 -0.83 -1.09 -0.73 -0.15 -0.28 0.68 -5.12 -3.55 - -0.34 -0.33 -1.67 0.59 0.94 0.86 0.21 0.34 0.41 0.55
0.31 0.08 0.13 0.2 0.3 0.22 0.31 0.59 0.35 0.41 0.31 0.19 -0.84 -0.68 -0.98 -0.57 0.2 -0.06 0.31 -6.2 -3.09 -3.25 -0.1 -0.22 -1.51 0.49 0.4 0.32 0.38 0.37 0.39 0.45
-0.48 -0.37 -0.37 0.26 0.2 -0.02 0.62 0.66 0.91 1.0 0.51 0.55 -0.19 -1.64 -1.68 -0.05 0.39 -0.34 0.24 -3.67 -7.03 -5.81 0.04 -0.35 -1.76 -0.05 -0.77 -0.57 0.96 0.78 0.4 0.43
-0.27 -0.22 -0.09 -0.01 0.34 0.51 0.49 0.62 1.0 0.96 0.85 0.54 -1.23 -1.71 -0.63 -0.59 0.43 -0.13 -0.13 -6.78 - -4.87 -0.03 -0.07 -1.85 0.11 -0.34 -0.12 0.72 0.63 -0.11 0.22
0.14 0.38 0.51 0.31 0.3 0.2 0.45 0.24 0.47 0.4 0.42 0.26 -3.03 -3.09 -4.95 -1.99 0.77 0.35 0.36 -5.2 -2.94 -4.96 0.48 0.54 -1.58 -0.1 0.22 0.27 0.73 0.66 0.03 0.09
-0.23 0.01 -0.38 0.09 0.16 -0.54 0.02 0.62 0.75 1.09 0.73 0.75 0.48 -2.18 -2.43 0.59 0.07 -1.44 -0.08 - -3.72 - 0.19 0.68 -4.96 0.11 -1.16 -1.46 0.78 0.49 0.58 0.83
0.03 -0.1 -0.52 -0.28 0.3 0.55 0.91 0.77 0.59 0.58 0.1 0.06 -0.53 -1.47 -0.33 -0.18 0.13 0.56 0.2 -3.97 -4.91 - 0.27 -0.18 -2.26 -1.0 -0.3 -0.47 0.67 0.57 0.78 0.51
0.49 0.36 0.23 0.31 0.3 0.12 0.19 0.27 0.22 0.43 0.36 0.67 -1.03 -0.6 -2.32 -0.33 -0.65 -0.7 0.39 -1.75 -1.7 -3.52 0.15 0.04 -0.43 0.61 -0.26 -0.03 0.09 -0.05 0.81 0.51
0.22 -0.05 0.16 0.15 0.01 0.14 0.27 0.38 0.76 0.71 0.59 0.64 -0.52 -1.33 -2.0 -0.42 0.01 -0.18 0.42 -3.05 -0.63 -6.22 0.08 -0.16 -0.94 0.27 -0.34 -0.01 0.57 0.51 0.08 0.14
0.34 0.15 -0.32 -0.05 0.07 -0.13 -0.27 0.16 0.51 0.77 0.9 0.61 0.51 -2.55 -3.33 -0.6 -0.52 -1.16 -0.03 -3.48 -1.06 -5.11 0.32 0.58 -0.27 1.14 -0.38 -1.1 -0.14 -0.07 0.97 0.63
0.82 0.53 0.13 0.21 0.16 0.04 0.26 0.21 0.3 0.45 0.39 0.52 -0.27 -0.6 -0.24 0.5 0.07 -0.69 0.16 - -2.0 -6.07 -0.03 -0.05 -3.46 0.57 0.08 0.11 0.46 0.52 -0.38 -0.56
0.82 0.32 0.03 0.03 0.16 0.23 0.2 0.14 0.43 0.51 0.32 0.63 -0.55 -1.29 -0.62 0.31 0.18 -0.34 0.31 -2.21 -0.99 -4.2 -0.06 0.05 -0.16 0.01 -0.57 -0.24 0.58 0.66 -0.38 -0.64
-0.1 -0.03 -0.09 -0.07 -0.26 -0.09 0.28 0.55 0.47 0.52 0.61 0.49 -0.63 -1.46 -1.86 -0.32 0.25 0.75 0.18 -6.58 -4.72 -5.9 -0.09 -0.36 -3.54 0.6 0.58 0.76 0.91 0.72 -0.18 -0.15
0.22 0.06 -0.01 0.05 0.22 0.13 0.06 -0.0 0.32 0.2 0.3 0.09 -0.13 -0.95 -1.66 -0.09 0.56 0.48 0.59 -2.59 -2.16 -3.59 0.4 0.07 -1.88 0.18 0.09 0.29 0.61 0.69 0.03 0.04
0.43 0.6 0.57 0.46 0.14 0.02 0.5 0.67 0.65 0.78 0.69 0.56 -5.42 -4.53 -4.68 -1.92 0.01 -0.43 0.07 -7.01 -4.32 -7.1 0.59 0.46 -1.95 0.16 -0.06 0.56 0.57 0.57 -0.01 -0.18
0.22 0.06 0.3 -0.33 -0.09 -0.5 0.49 -0.15 0.44 0.63 0.62 0.22 -0.72 -0.98 -0.7 -0.1 0.34 0.65 0.5 - - - 0.11 -0.05 -5.05 0.4 0.14 0.65 0.76 0.85 -0.26 -0.15
0.04 0.25 0.38 0.55 -0.18 0.26 0.92 0.42 0.93 0.82 0.66 0.55 -0.37 -0.81 -0.47 -0.79 -0.04 -0.66 -0.21 - -3.55 - 0.22 -0.09 -1.19 -0.18 -0.36 -0.07 -0.12 -0.04 0.63 0.27
0.65 0.23 0.1 0.13 0.11 0.15 0.11 0.38 0.58 0.55 0.71 0.69 0.01 -1.51 -2.25 0.48 -0.09 -0.57 0.5 -5.06 -2.9 -3.91 0.21 0.08 -0.39 0.77 -0.94 -0.55 0.43 0.45 -0.25 -0.59

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.