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Heatmap: Cluster_191 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.16 -0.12 -0.17 0.09 -0.12 -0.02 0.2 0.36 0.36 0.35 0.31 0.28 -0.76 -0.8 -0.28 -0.23 -0.52 -0.95 -0.02 0.11 -0.35 -0.45 -0.48 -0.35 1.09 0.88 0.21 0.2 -0.2 -0.14 -0.48 -0.43
- -4.47 -32.86 - 0.54 -1.82 -3.41 - -20.18 - -20.38 -19.25 - - - -31.57 - -0.74 - 2.39 1.89 2.33 -30.39 - 2.82 1.5 1.75 1.21 - - - -
0.47 0.1 -0.41 0.19 0.22 -0.24 0.1 0.58 0.26 0.75 0.59 0.66 -0.3 -0.86 0.69 0.2 -0.56 -1.7 -0.43 0.09 -0.71 -1.5 -1.2 -1.44 1.07 0.76 0.26 0.23 -0.63 -0.84 -0.74 -1.19
-1.5 -0.92 -1.13 -0.42 -0.24 0.07 -0.34 -0.33 -0.52 -1.14 -1.19 -0.96 -1.08 -0.76 -0.45 -0.71 -0.66 -0.99 -0.47 0.7 1.2 1.14 -0.19 -0.21 1.66 1.15 1.22 1.25 -0.8 -0.71 -0.96 -1.28
-0.42 -0.06 -0.26 0.15 0.02 0.14 -0.05 0.25 -0.14 0.04 -0.31 -0.14 -2.81 -1.17 -6.09 -1.93 -0.32 -0.84 -0.67 0.9 1.21 -4.7 -0.61 -0.76 2.1 0.23 0.87 0.93 -0.19 -0.21 -0.72 -0.77
-0.09 0.11 0.1 0.23 -0.02 0.18 0.58 0.87 0.79 0.99 0.82 0.58 -3.31 -1.58 -1.59 -2.9 -0.34 -0.28 -0.05 -1.15 0.87 -1.43 -1.08 -1.86 1.39 0.19 -0.0 0.22 -0.07 -0.22 -1.38 -1.65
-0.33 -0.54 -0.85 -0.62 0.17 0.59 0.93 0.61 0.55 0.6 -0.06 0.0 -2.66 -3.32 -1.23 -1.62 -0.36 -0.74 0.11 -3.97 0.79 -1.56 -0.58 -1.28 1.72 0.42 0.19 0.64 0.41 0.43 -0.3 -0.27
0.05 -0.23 -0.25 -0.2 -0.26 -0.34 -0.51 -0.11 -0.03 0.02 0.23 0.16 -0.25 -0.68 -1.49 -0.2 -0.84 -0.76 -0.62 0.38 0.31 -0.36 -0.35 -0.25 1.79 1.23 0.56 0.57 -0.8 -0.72 -0.44 -0.38
0.06 -0.1 -0.07 0.18 0.29 0.21 0.35 0.48 0.51 0.63 0.6 0.48 -0.83 -1.06 -1.3 -0.39 -0.95 -2.56 -0.45 0.39 0.7 -1.52 -0.91 -0.8 1.75 0.43 -0.13 -0.19 -0.59 -0.49 -0.76 -0.95
-0.14 -0.22 -0.33 -0.19 -0.15 -0.07 0.14 0.29 0.33 0.27 0.17 -0.04 -0.7 -0.69 -0.73 -0.46 -0.32 -0.52 -0.45 -0.43 0.77 0.41 -0.51 -0.53 1.19 0.65 0.55 0.32 -0.37 -0.28 -0.46 -0.04
0.02 -0.29 0.11 0.28 0.23 -0.16 0.08 0.46 0.67 0.88 0.67 0.44 1.06 0.25 0.17 0.32 -1.52 -2.56 -0.87 -1.28 -0.5 -1.36 -1.87 -1.89 1.02 1.09 0.16 0.08 -0.92 -1.22 -1.2 -0.99
0.05 -0.12 -0.28 -0.07 0.0 -0.13 -0.17 0.26 0.27 0.28 0.18 0.12 0.2 0.15 -0.14 0.12 -0.81 -1.27 -0.17 0.34 -0.17 -0.4 -0.67 -0.51 0.92 0.95 0.48 0.28 -0.8 -0.66 -0.41 -0.21
-0.1 -0.04 -0.38 0.06 0.03 0.04 0.02 0.23 0.24 0.13 0.01 0.15 -0.39 -0.56 -0.76 -0.2 -0.08 -0.53 0.21 -0.07 0.62 -0.3 -0.06 -0.18 1.23 0.23 -0.07 -0.06 0.09 0.02 -0.51 -0.73
-1.09 -1.66 -1.15 -0.88 -0.5 0.44 0.6 0.76 0.39 0.16 -0.4 -0.75 -3.4 -3.49 -0.77 -2.65 -0.7 -0.51 -0.24 -4.85 1.1 0.42 -0.91 -1.55 2.32 -0.45 1.45 1.22 -0.23 -0.45 -0.38 -0.87
-0.1 -0.18 -0.04 0.09 0.01 0.12 0.04 0.21 0.11 0.13 -0.0 0.06 -0.11 -0.01 -0.28 -0.32 -0.38 -0.21 0.01 0.2 0.51 -0.37 -0.24 -0.23 1.05 0.38 0.23 0.17 -0.15 -0.2 -1.01 -1.01
-0.15 -0.53 -0.46 -0.35 -0.21 -0.41 -0.24 0.4 0.39 0.44 0.39 0.15 0.38 0.6 0.37 0.3 -1.3 -1.65 -0.41 -0.34 0.03 -1.61 -0.63 -0.3 0.94 1.33 0.4 0.2 -0.88 -0.84 -0.52 -0.15
-0.1 -0.3 -0.33 -0.11 -0.32 -0.07 -0.01 0.1 0.12 0.24 0.03 0.11 -0.1 -0.26 -0.41 -0.1 -0.92 -1.19 -0.2 0.21 -0.2 0.14 -0.53 -0.42 1.19 1.36 0.58 0.43 -0.58 -0.54 -0.51 -0.38
-0.95 -0.83 -0.32 -0.18 -0.07 -0.46 -0.31 -0.45 -0.43 -0.49 -0.39 -0.72 0.04 -1.46 -1.71 -0.02 -0.45 -0.93 -0.01 0.61 1.32 0.55 -0.15 -0.17 1.99 0.8 0.43 0.24 -0.86 -0.67 -0.58 -0.17
0.49 -0.01 0.15 -0.03 0.08 0.12 0.21 0.5 0.59 1.05 0.98 0.75 -0.82 -1.83 0.3 -0.96 -0.53 -1.84 0.35 -0.08 -2.75 0.22 -0.41 -0.69 -0.15 1.12 -0.44 -0.48 -0.91 -0.89 -0.66 -0.24
-0.26 -0.49 -0.34 -0.3 -0.09 -0.1 0.17 0.51 0.47 0.57 0.5 0.24 0.26 -0.29 0.24 0.28 -0.75 -0.91 0.08 -0.43 0.08 -1.17 -0.37 -0.07 0.38 0.95 -0.43 -0.38 -0.28 -0.22 -0.01 -0.06
-0.03 -0.67 0.82 0.13 0.04 -1.43 -0.05 -0.66 0.83 -0.15 1.09 0.36 - -1.29 -0.15 -3.68 -3.86 - -2.32 -0.63 -1.1 - -1.29 -1.28 2.31 2.39 1.83 -1.16 -2.81 -3.98 -1.69 -2.54
0.17 -0.03 -0.06 -0.34 -0.3 -0.15 -0.53 -0.23 -0.18 -0.24 -0.11 -0.18 -0.1 0.44 -0.94 0.09 -0.7 -0.57 0.06 -0.32 0.68 -0.84 -0.12 -0.11 1.41 1.08 0.63 0.16 -0.56 -0.48 -0.54 -0.32
-0.18 -0.44 -0.31 -0.3 -0.14 -0.41 -0.02 0.02 0.07 0.38 -0.7 0.46 -1.17 -0.01 -0.47 -1.36 -1.9 -1.1 -1.39 -0.08 -0.18 0.36 -1.71 -1.4 1.98 2.28 0.76 0.81 -1.66 -1.29 -2.26 -2.98
0.1 0.14 -0.36 -0.19 -0.53 -0.31 -0.22 -0.07 0.09 0.11 0.08 0.25 -1.06 0.11 -0.0 -0.95 -0.84 -2.81 -0.9 0.13 0.76 0.18 -0.51 -0.21 0.54 1.62 0.91 0.8 -0.76 -0.84 -0.64 -0.48
-0.56 -0.69 -0.83 -0.42 -0.11 0.14 0.42 0.53 0.56 0.4 0.05 0.04 -0.68 -0.72 -1.19 -0.3 -0.47 -0.86 0.34 0.13 -0.88 -0.78 -0.24 -0.42 1.76 0.62 0.45 0.3 -0.13 -0.15 -0.4 -0.31
0.3 0.37 0.89 -0.03 0.86 0.61 0.21 0.07 1.29 1.24 0.12 0.94 - -0.87 -0.9 -4.3 - - - 0.36 0.49 -1.22 -3.31 -3.46 2.92 -1.03 - -0.58 -3.47 -4.43 - -
-0.32 -1.22 -0.58 -0.77 -1.42 -0.38 -0.41 0.3 -0.1 0.38 0.03 0.06 0.09 -0.6 -0.76 -0.31 -1.24 -2.87 -0.05 0.88 1.53 0.14 -1.01 -0.15 2.37 0.96 0.07 -0.26 -1.34 -1.43 -2.45 -1.8
-0.01 0.04 -0.21 0.13 0.05 0.26 0.19 0.35 0.48 0.6 0.23 0.41 -0.97 -1.69 -0.36 -0.28 -0.24 -3.17 0.62 -0.22 0.67 -3.13 -0.23 -0.37 1.3 0.26 -0.22 -0.21 -0.18 -0.12 -0.26 -0.31
0.28 -0.42 1.51 -1.52 -0.35 0.52 -0.03 -0.04 1.91 1.11 -0.1 1.68 -2.38 - -3.39 -3.42 -3.57 -1.38 - - - - -3.43 - 3.12 -0.1 -0.1 -0.49 -3.52 -3.54 -2.56 -3.63
0.28 -0.42 1.51 -1.52 -0.35 0.52 -0.03 -0.04 1.91 1.11 -0.1 1.68 -2.38 - -3.39 -3.42 -3.57 -1.38 - - - - -3.43 - 3.12 -0.1 -0.1 -0.49 -3.52 -3.54 -2.56 -3.63
-0.2 -0.1 0.2 0.13 -0.04 0.19 0.21 0.17 0.0 0.02 -0.12 0.04 -0.82 -0.16 0.12 -0.76 -1.61 -2.5 -1.0 0.26 1.39 -0.26 -1.09 -0.78 1.74 1.04 0.27 0.53 -1.43 -1.18 -1.25 -1.08
0.41 -0.53 -1.31 -0.32 0.51 -0.45 0.84 0.81 1.3 1.31 1.18 1.03 -33.95 -6.01 - - -16.94 -8.31 -17.17 1.1 0.79 -2.16 -17.23 -6.0 1.53 2.16 0.43 -0.04 -12.08 -23.5 -6.04 -6.45
-0.13 -0.08 -0.06 -0.12 -0.16 -0.28 0.04 0.18 0.3 0.54 0.44 0.38 0.2 -0.14 -0.13 -0.06 -0.95 -0.86 -0.04 -0.56 -0.42 -3.36 -0.46 -0.25 0.87 1.09 0.47 0.14 -0.6 -0.58 0.02 0.28
0.07 0.09 -0.08 -0.0 -0.35 -0.4 -0.24 0.02 0.13 0.17 0.29 0.12 -0.42 -0.65 -0.59 0.02 -0.43 -0.05 0.04 0.34 0.71 -0.25 -0.34 -0.44 1.53 0.6 -0.19 -0.3 -0.26 -0.1 -0.95 -0.87
-0.49 -0.26 -0.26 0.07 0.35 0.31 0.71 0.72 0.72 0.48 0.44 0.16 -1.57 -2.02 -1.45 -0.88 -0.85 -3.02 -0.54 0.39 0.5 -0.76 -0.95 -0.8 1.43 1.24 0.27 0.58 -0.44 -0.64 -1.16 -1.3
-0.2 0.27 0.41 0.25 0.15 -0.0 0.12 0.15 0.05 0.01 0.05 -0.12 -0.51 -0.35 -1.41 -0.07 -0.52 -0.59 0.19 0.37 0.39 -0.47 -0.26 -0.17 1.24 0.33 -0.05 0.06 -0.29 -0.37 -0.49 -0.31
0.03 -0.0 0.01 0.03 0.23 0.11 0.22 0.32 0.27 0.31 0.28 0.08 -0.13 -0.58 -0.15 -0.04 -0.74 -1.11 -0.28 -0.27 -0.13 -1.43 -0.35 -0.27 1.27 0.71 0.36 0.43 -0.46 -0.38 -0.55 -0.62
0.08 0.02 -0.24 0.19 0.28 0.01 -0.01 0.24 0.28 0.15 0.01 0.1 -0.42 -0.39 -0.27 -0.26 -0.78 -1.28 -0.23 -0.05 -0.43 -0.68 -0.5 -0.45 1.19 0.92 0.9 0.7 -0.66 -0.61 -0.57 -0.48
-0.29 -0.06 -0.02 -0.01 0.06 0.02 0.03 0.19 0.09 0.04 0.03 0.33 -1.04 -0.98 -0.98 -0.63 -1.04 -2.03 0.31 0.54 0.06 -0.81 -0.62 -0.74 2.38 1.19 0.19 0.11 -0.79 -0.66 -2.69 -2.81
-0.26 -0.53 -0.72 -0.51 -0.24 -0.04 0.3 0.24 0.48 0.56 0.05 0.11 -0.65 -1.3 -0.35 -0.59 -0.67 -1.02 -0.41 0.49 1.09 -1.84 -0.49 -0.39 1.82 0.6 0.34 -0.09 -0.62 -0.68 -0.37 0.0
-0.02 -0.09 -0.22 -0.11 0.03 -0.03 0.19 0.17 0.11 0.08 0.09 -0.01 -0.12 -0.6 -0.48 -0.05 -0.5 -0.92 0.17 -0.76 0.19 -1.04 -0.14 -0.18 1.3 0.51 0.29 0.11 -0.36 -0.46 0.22 0.42
-0.33 -0.84 -0.97 -0.48 0.05 0.74 0.79 0.65 0.5 0.63 -0.15 -0.27 -1.83 -2.38 -0.09 -1.36 -0.65 -0.22 -0.47 0.09 1.5 -1.2 -0.63 -0.72 1.59 -0.89 0.15 0.23 0.01 -0.25 -0.3 -0.69
-0.43 -0.4 -0.27 -0.08 -0.09 -0.1 -0.25 -0.32 -0.2 -0.23 -0.2 -0.35 -0.09 -0.82 -0.94 0.08 -0.11 -0.63 -0.0 0.08 0.69 0.56 -0.22 -0.32 1.53 0.63 0.47 0.44 -0.17 -0.13 -0.56 -0.52
-0.88 -2.2 -1.66 -2.07 -2.9 0.34 -0.28 0.38 0.08 0.24 0.05 -1.43 -2.44 -3.21 -0.77 -2.09 -0.56 -0.25 -0.68 -1.83 1.28 -2.14 -0.84 -1.21 2.46 0.32 1.31 1.71 0.24 0.09 -0.32 -0.35
-0.15 -0.21 -0.17 -0.05 -0.07 -0.11 -0.07 0.23 0.37 0.34 0.24 0.08 0.02 -0.35 -0.39 -0.02 -0.66 -1.03 -0.15 0.1 -0.7 -0.61 -0.27 0.0 0.72 0.54 0.95 0.94 -0.27 -0.15 -0.91 -0.68
-0.47 -0.76 -0.55 -0.33 -0.66 -0.16 0.28 -0.01 -0.19 -0.06 -0.35 -0.77 0.43 -0.48 -3.44 0.78 -0.54 -0.82 -0.09 -1.0 1.37 -1.17 -2.02 -1.56 1.76 1.59 1.15 0.39 -0.8 -0.72 -0.91 -1.19
-0.29 -0.59 -0.81 -0.21 0.28 -0.62 -0.06 0.01 -0.22 0.06 0.11 0.01 -0.37 -0.93 -0.92 -0.39 -0.55 -2.41 -0.36 0.85 0.4 0.21 -0.4 -0.12 1.72 1.13 0.49 0.4 -0.46 -0.43 -0.61 -0.44
-0.38 -0.38 -0.33 -0.11 -0.11 -0.07 0.02 0.46 0.48 0.58 0.55 0.42 -0.03 -0.27 -0.29 -0.02 -0.72 -0.84 -0.23 -0.16 -0.43 -1.13 -0.48 -0.34 1.14 0.92 0.12 0.09 -0.39 -0.35 -0.22 -0.14
-0.31 -0.22 -0.35 -0.0 0.01 0.05 -0.11 0.09 0.29 0.21 0.17 0.11 0.44 0.1 0.73 0.65 -0.97 -1.16 -0.63 -0.83 -1.34 -0.66 -0.26 -0.06 0.68 0.94 0.22 0.13 -0.63 -0.61 0.16 0.14
-0.14 -0.2 -0.29 0.09 0.16 0.25 0.21 0.21 0.1 0.07 -0.19 -0.11 -2.91 -2.01 -2.18 -1.53 -0.04 -0.68 -0.53 -0.14 1.25 -0.14 -0.46 -0.66 1.75 0.4 0.67 0.68 -0.13 -0.03 -0.49 -0.95

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.