Heatmap: Cluster_86 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.31 -0.74 -0.05 -0.12 0.16 0.49 0.8 1.14 0.69 0.8 0.7 0.34 1.33 -1.29 -1.14 -0.19 -0.78 -0.19 -0.43 -2.7 -0.96 -1.01 -0.18 -0.04 -1.92 -0.45 0.18 0.26 -0.26 -0.27 -0.35 -0.43
0.98 0.57 0.52 0.23 0.43 0.36 -0.18 -0.69 -0.16 0.05 0.38 0.35 1.96 0.47 -0.23 0.16 -0.64 -0.01 -2.06 -3.85 -2.54 -1.11 0.33 1.17 -2.43 -2.28 -0.63 -0.61 -1.04 -0.21 -1.22 -1.08
0.27 0.38 0.57 0.51 0.48 0.66 0.47 0.38 0.26 0.59 0.3 0.22 0.67 0.43 -1.03 0.81 -0.44 -0.81 0.21 -2.97 -1.21 -5.02 0.13 0.09 -1.31 -0.47 -0.61 -0.49 -0.2 -0.18 -0.66 -0.82
-0.21 0.39 0.45 0.4 0.51 0.3 0.25 0.26 0.14 0.08 -0.02 -0.14 0.83 0.08 -0.7 1.11 -0.31 -0.81 0.1 -2.23 -1.39 -3.03 0.22 0.18 -0.66 0.39 0.21 0.43 -0.4 -0.19 -1.12 -1.24
0.16 -0.18 0.31 0.98 1.18 1.09 0.63 0.57 0.31 0.23 0.28 -0.06 1.74 -1.17 -1.13 0.6 -0.93 -1.53 0.08 -3.23 -3.3 -6.32 -0.51 -0.96 -1.34 -0.1 0.27 0.46 -1.11 -1.14 -1.28 -1.31
-0.33 0.27 0.66 0.57 0.48 0.32 0.31 0.12 0.18 -0.12 -0.25 -0.56 1.93 -0.19 0.57 1.45 -1.06 -0.86 -0.56 -1.46 -1.12 -0.79 0.05 0.16 0.61 -1.91 -1.03 -0.56 -1.29 -0.99 -2.56 -2.38
0.43 0.47 0.44 0.31 0.43 0.54 0.21 0.11 0.4 0.41 0.23 0.27 0.38 0.07 -2.02 0.72 -0.6 -0.3 0.52 -5.04 -2.03 -3.6 -0.21 -0.18 -1.93 0.1 -0.0 0.32 -0.53 -0.38 0.13 0.27
0.46 0.38 0.2 0.47 0.54 0.48 -0.09 0.79 0.76 1.13 0.72 0.99 2.3 -1.14 -1.85 -0.37 -1.88 -0.83 -3.6 - -0.93 -5.17 -0.67 -2.03 -4.26 1.06 0.31 -0.48 -4.0 -1.88 -1.92 -1.71
-1.59 0.22 0.67 1.19 0.78 0.83 1.01 0.64 0.89 1.26 0.55 0.2 2.44 -3.51 -3.29 0.0 -1.7 -0.9 -1.59 - - - -1.32 -1.12 -3.15 0.54 -0.95 -0.1 -1.37 -1.5 -2.24 -3.59
-0.73 -0.53 0.02 -0.4 -1.26 0.0 -0.39 0.06 -0.28 0.16 0.22 0.08 2.16 -1.2 1.83 2.04 -1.49 -0.94 -0.26 -2.75 -4.3 - -0.86 -0.46 -3.16 0.26 -0.47 0.08 -0.76 -1.03 -0.55 -0.06
-0.01 0.09 0.35 0.51 0.54 0.43 0.14 0.06 -0.01 -0.16 -0.38 -0.35 0.25 -0.19 -0.79 0.61 -0.3 -0.96 0.61 -0.39 -0.44 -1.09 -0.23 -0.25 -0.44 0.09 0.29 0.59 -0.25 -0.03 -0.14 -0.14
0.17 0.15 0.37 0.25 0.52 0.46 0.09 0.17 0.1 0.02 0.09 -0.32 0.92 0.16 -0.15 0.83 -0.22 -0.46 0.06 -3.27 -2.4 -5.79 0.22 0.27 -1.84 0.26 0.47 0.57 -0.25 -0.11 -0.74 -0.68
0.15 0.24 0.52 0.75 0.75 0.68 0.39 0.2 0.03 0.06 -0.14 -0.32 0.19 0.12 -0.49 0.52 -0.34 -1.25 0.53 -7.89 -8.24 - -0.02 -0.16 -2.1 0.2 0.49 0.83 -0.22 -0.11 -0.14 -0.14
0.05 0.44 0.43 0.41 0.3 0.22 0.06 -0.07 0.03 0.07 0.02 -0.06 1.39 0.64 0.61 0.96 -0.51 -0.63 -0.19 -1.86 -1.95 -4.02 0.04 0.1 -0.2 -0.13 -0.26 -0.14 -0.55 -0.37 -1.19 -0.99
-0.29 0.53 0.34 0.48 0.23 0.34 0.21 -0.02 0.23 -0.17 -0.39 -0.32 1.43 1.01 1.52 1.17 -1.73 -0.5 -1.16 -0.43 -2.15 -0.91 -0.02 0.88 -0.83 -1.41 -2.11 -2.0 -1.06 -0.5 -1.94 -1.26
-0.09 0.28 0.85 0.95 0.86 0.67 0.44 0.26 0.33 0.31 0.21 -0.17 1.48 0.02 -0.79 1.23 -0.89 -1.54 -0.9 -4.07 -1.81 -2.58 0.34 0.52 -2.18 -0.03 -0.75 -0.74 -1.34 -1.11 -1.23 -0.8
0.03 0.23 0.05 0.13 -0.02 0.06 0.12 0.28 0.33 0.32 0.22 0.19 1.45 0.28 0.4 0.97 0.03 -0.94 0.06 -2.89 -3.22 -5.55 -0.18 -0.09 -0.94 0.53 -0.35 -0.13 -0.1 -0.01 -0.89 -0.99
0.11 -0.14 0.14 0.08 0.25 0.27 0.24 0.26 0.22 0.33 0.16 0.0 1.43 0.21 0.88 1.02 -0.7 -0.91 -0.06 -3.3 -2.77 -2.79 0.39 0.66 -2.42 -0.36 -0.44 -0.22 -0.25 -0.03 -0.86 -0.95
-0.35 -0.16 -0.08 0.25 0.78 0.39 0.48 0.85 0.25 0.34 0.21 -0.44 0.64 -0.41 0.43 0.29 -0.63 -0.16 0.21 - - - 0.03 -0.22 -2.49 0.8 0.69 0.5 -0.16 -0.28 -0.79 -0.13
0.37 0.42 0.72 0.71 -0.14 0.54 0.03 0.7 0.59 0.94 0.37 0.42 2.37 1.37 1.01 -4.5 - -3.19 -5.07 -4.61 -2.53 - -5.12 -5.08 -2.37 1.44 -0.33 0.05 -5.16 -5.64 -5.69 -6.74
0.26 0.39 0.39 0.46 0.45 0.37 0.23 0.15 0.03 0.11 0.04 -0.02 0.32 -0.39 -1.05 0.55 -0.23 -0.64 0.26 -0.67 -1.26 -1.19 0.05 0.07 -0.69 0.22 0.15 0.01 -0.31 -0.18 -0.01 -0.08
0.17 0.18 0.31 0.65 0.94 1.07 0.67 0.52 0.41 0.42 0.22 -0.03 0.07 0.19 -0.45 0.43 -0.23 -0.24 0.0 -3.29 -3.3 -2.65 0.13 -0.19 -4.1 -0.25 -0.05 0.09 -0.3 -0.29 -0.76 -0.65
0.08 0.32 0.39 0.31 0.39 0.18 0.11 0.18 0.17 0.16 -0.02 0.11 1.15 0.27 0.1 0.72 -0.19 -0.37 0.21 -7.12 -3.58 -3.88 0.03 0.04 -0.42 0.36 0.01 0.23 -0.17 -0.16 -1.02 -0.9
0.29 0.27 0.29 0.23 0.29 0.31 0.03 0.26 0.02 0.17 -0.01 -0.02 0.35 0.35 -0.57 0.61 -0.37 -0.31 0.38 -4.48 -3.72 -4.95 0.11 -0.01 -0.41 0.33 0.37 0.41 -0.04 -0.16 -0.13 0.15
-0.11 0.19 0.75 0.55 0.65 0.41 -0.1 0.22 0.04 0.02 -0.29 -0.47 1.45 -0.28 -0.32 1.36 -1.03 -0.92 -0.04 -8.27 -3.98 -4.28 0.58 0.6 -3.8 0.47 -0.17 0.23 -0.56 -0.54 -0.83 -0.52
0.83 0.74 0.93 0.37 -0.51 -0.29 -0.46 -0.27 0.54 0.21 0.03 0.33 2.86 0.37 -6.2 1.58 -1.09 -2.11 -3.66 - -1.64 -5.73 -0.09 -0.32 -1.51 -1.28 -1.44 -0.23 -1.5 -1.44 -2.7 -2.72
0.5 0.54 0.52 0.5 0.03 0.26 0.21 0.41 0.54 0.36 0.29 0.4 1.6 0.21 -0.26 0.94 -2.05 -3.44 -0.76 -1.7 -1.09 -0.73 -1.24 -1.39 -0.66 1.02 0.29 0.39 -1.99 -1.93 -1.84 -1.96
0.23 0.37 0.64 0.4 0.44 0.39 -0.33 0.22 0.32 0.08 -0.12 -0.69 1.96 -0.07 -2.36 1.05 -0.39 -1.23 -0.24 -3.87 -1.68 -6.26 0.03 -0.03 -0.56 0.03 0.2 0.36 -0.28 -0.33 -1.41 -0.93
0.38 0.75 0.84 0.75 0.87 1.0 0.36 0.16 0.4 0.38 0.29 -0.06 1.49 -0.13 -1.88 0.26 -1.07 -0.82 -0.05 -3.64 -2.42 -4.13 -0.0 0.19 -0.96 -1.04 -0.2 -0.17 -0.77 -0.53 -1.33 -1.37
-0.53 -0.46 0.21 0.43 1.13 0.67 0.41 0.36 -0.02 -0.33 -0.24 -0.5 1.08 -1.1 0.67 0.93 -1.06 -1.26 -0.77 -2.55 -3.08 -1.89 -0.16 0.45 -1.87 1.07 0.53 0.69 -0.42 -0.37 -1.25 -0.7
-0.37 -0.6 -0.4 -0.59 -0.42 -0.59 -0.7 0.2 0.37 0.52 0.28 -0.12 2.08 0.77 1.48 2.07 -3.2 -3.21 -1.04 -7.96 -6.12 -2.25 -0.41 0.83 -2.07 0.75 -0.27 -0.68 -1.47 -1.09 -2.1 -1.71
-0.21 0.99 1.03 0.63 1.2 1.09 0.39 -0.46 -0.58 -0.64 -0.63 -0.25 -0.68 -2.65 -1.26 0.52 0.15 -0.8 0.49 -0.01 -0.64 0.12 -0.87 -1.68 -0.99 -1.7 0.47 1.18 -0.69 -0.67 -0.66 -0.62
0.62 0.51 0.07 -0.01 0.19 0.13 -0.23 -0.15 0.15 0.23 0.04 0.02 1.52 0.24 0.24 1.18 -0.43 -0.26 0.1 -1.45 -3.4 -2.07 0.45 0.75 -3.92 -0.77 -0.46 -0.66 -0.62 -0.34 -0.68 -0.5
0.1 0.27 0.45 0.81 0.84 0.84 0.51 0.09 0.11 0.04 -0.04 -0.09 0.31 0.15 -0.61 0.69 -0.38 -1.03 0.55 -3.74 -2.17 -5.47 -0.08 -0.07 -2.26 -0.13 0.16 0.34 -0.26 -0.09 -0.3 -0.21
0.05 -0.31 0.31 0.22 0.18 -0.06 0.93 0.52 0.67 0.62 0.68 0.54 2.26 -0.34 0.46 0.3 -1.74 -2.7 -0.2 - - - -1.39 -1.12 -2.3 0.84 0.59 0.36 -1.73 -1.57 -2.77 -2.09
-0.04 0.35 0.49 0.61 0.98 0.55 0.34 0.13 0.49 0.64 0.49 0.26 0.85 0.14 0.23 0.78 -0.63 -1.23 -0.51 -4.96 -5.4 -7.48 0.44 0.13 -3.07 0.1 -0.02 0.06 -0.68 -0.55 -1.5 -0.97
0.22 0.23 0.1 0.07 0.26 0.22 0.39 0.12 0.17 0.3 0.19 0.0 0.88 -0.3 -0.0 0.4 -0.31 -0.95 0.07 0.09 -1.86 -2.73 -0.25 -0.23 0.02 0.3 0.24 0.31 -0.43 -0.33 -0.45 -0.31
-0.13 -0.05 0.26 0.36 0.52 0.47 0.27 0.26 0.13 0.04 -0.01 -0.3 0.54 0.43 -0.64 0.84 -0.39 -0.55 0.17 -3.15 -1.09 -4.2 0.18 0.37 -0.72 0.54 0.34 0.52 -0.41 -0.29 -0.63 -0.64
-0.5 -0.35 0.05 0.18 0.51 0.2 0.13 0.16 0.08 0.18 0.0 -0.22 1.71 0.1 -0.27 1.19 -1.08 -1.34 -0.37 -0.82 -2.06 -1.76 0.51 1.05 -1.64 0.26 -0.17 0.14 -0.78 -0.61 -1.06 -0.81
-0.17 0.13 0.02 0.18 0.22 0.17 -0.1 0.14 0.14 0.69 0.57 0.4 1.73 0.69 1.23 1.46 -1.84 -1.78 -1.7 -4.28 -1.43 -4.08 -0.3 0.0 -0.17 -0.19 -0.36 -0.01 -1.47 -1.38 -1.98 -1.7
0.28 0.4 0.38 0.72 0.9 0.92 0.45 0.36 0.26 0.25 0.15 0.08 0.23 -0.09 -0.87 0.49 -0.68 -1.04 0.32 -2.44 -1.05 -3.7 -0.4 -0.25 -1.87 0.16 0.27 0.39 -0.55 -0.38 -0.51 -0.43
0.16 -0.11 -0.71 -0.12 0.35 0.33 -0.24 0.13 -0.19 -0.13 0.04 -0.07 0.6 0.9 1.1 0.83 -0.18 0.04 0.87 -1.5 -2.13 -1.54 0.42 0.63 -2.39 -1.78 -1.58 -1.33 0.11 -0.12 -0.01 0.16
-0.67 -0.01 -0.22 -0.23 -0.12 -0.08 0.65 1.15 1.05 0.88 0.68 0.15 1.87 0.21 0.04 0.59 -1.25 -1.25 -1.24 -3.01 -4.37 -3.66 -1.3 -1.18 -0.62 -0.75 0.26 -0.1 -0.01 -0.11 -0.79 -0.32
0.22 0.09 -0.04 0.18 0.11 0.34 -0.12 -0.1 0.18 0.22 0.14 0.22 1.13 0.66 1.07 0.9 -0.63 -0.49 0.45 -0.76 -2.46 -0.91 0.51 0.8 -2.91 -1.27 -1.74 -1.62 -0.52 -0.43 -0.71 -0.4
-0.08 -0.23 0.01 0.22 0.5 0.33 -0.18 -0.32 -0.42 -0.07 0.1 -0.16 1.83 0.45 1.59 2.02 -1.77 -1.0 -1.17 -7.87 -6.63 - 0.66 1.02 -5.28 -1.54 -1.74 -1.17 -0.96 -0.19 -1.78 -1.54
0.63 0.29 -0.07 -0.04 0.78 0.14 -1.14 -0.46 -0.02 -0.16 -0.17 -0.08 2.05 0.13 -1.33 1.49 -0.28 0.56 0.05 - - - -0.08 -0.1 -2.79 -0.47 -0.15 -0.16 -0.49 -0.33 -0.25 -0.11
0.26 0.26 -0.05 0.31 0.33 -0.13 0.16 0.12 0.48 1.21 0.61 0.98 1.92 -0.08 -0.65 0.43 -1.25 -3.55 -0.71 -5.0 -4.47 - -0.04 -0.11 -0.19 0.84 -0.48 -0.34 -1.06 -0.75 -1.6 -1.28
0.29 0.57 0.51 0.44 0.6 0.59 0.34 0.5 0.4 0.51 0.45 0.15 0.39 0.22 -0.41 0.61 -0.47 -0.44 -0.05 -2.62 -2.41 - 0.16 0.01 -4.31 -0.07 -0.34 -0.41 -0.22 -0.13 -0.72 0.04
-0.34 -1.74 -1.37 -0.37 -1.3 0.25 0.78 0.93 1.19 0.94 0.57 0.65 1.14 0.35 -0.19 -0.41 -1.03 -0.92 0.12 -4.88 -2.19 -3.5 -1.03 -0.48 -0.62 0.55 0.78 0.23 -0.34 -0.26 -0.3 0.14
0.32 0.33 0.1 0.49 -0.28 -0.15 -0.19 -0.04 0.55 0.75 1.02 0.59 2.1 -0.34 1.84 2.18 -4.47 -3.97 -1.9 - - - -1.89 -0.19 -4.48 -0.54 -1.86 -1.83 -2.58 -1.8 -2.64 -3.26
0.4 0.53 0.22 0.35 0.36 0.43 0.45 0.22 0.13 -0.02 0.16 0.22 1.48 1.12 0.95 1.12 -0.79 -1.57 -0.27 -8.13 -6.99 -6.77 -0.27 1.12 -1.48 -0.5 -1.58 -1.6 -0.89 -0.79 -1.84 -1.69
0.14 0.36 0.41 0.48 0.63 0.65 0.52 0.34 0.3 0.49 0.15 0.04 -0.01 -0.29 0.1 0.18 -0.13 -0.27 0.05 -1.78 -0.56 -1.06 -0.03 -0.03 -2.35 -0.37 -0.27 -0.01 -0.23 -0.2 -0.33 -0.35
0.08 0.32 0.52 0.24 0.55 0.39 0.35 0.28 0.16 0.08 0.31 0.04 0.67 0.14 0.23 0.55 -0.4 -0.71 0.09 -8.79 -5.2 -4.82 0.27 0.47 -1.61 0.08 0.22 0.21 -0.24 -0.28 -0.34 -0.33
0.11 0.2 0.4 0.37 0.72 0.49 0.22 0.32 0.21 0.22 -0.02 -0.26 1.25 -0.61 0.29 0.71 -0.38 -0.65 0.2 -6.41 -2.77 -0.85 -0.52 -0.3 0.2 -0.13 0.31 0.1 -0.43 -0.38 -1.04 -0.97
-1.37 0.25 1.27 1.87 1.61 1.63 1.19 0.69 0.51 0.3 -0.22 -0.4 1.77 -3.21 -3.18 -1.61 -0.75 -1.93 -4.06 - -5.82 -9.18 -0.53 -1.42 -3.48 -1.49 -0.21 0.34 -0.82 -0.6 -2.18 -3.35
-0.1 0.05 0.18 0.59 0.84 0.64 0.5 0.34 0.04 0.09 -0.11 -0.3 0.9 0.09 -0.91 1.02 -0.21 -1.87 0.4 -4.99 -2.77 -5.45 -0.08 -0.5 -1.91 0.79 0.46 0.61 -0.22 -0.08 -1.01 -0.86
0.52 0.17 -0.25 0.12 -0.15 -0.15 -0.17 -0.41 0.02 0.03 0.21 -0.19 1.31 0.94 1.3 1.56 -0.43 0.05 -2.03 -4.32 -5.01 -2.78 0.49 1.41 -0.68 -0.91 -1.23 -1.15 -0.76 -0.71 -1.53 -1.8
0.45 0.6 0.62 0.6 0.89 0.98 0.24 -0.16 -0.48 -0.24 -0.44 -0.2 0.41 -1.33 -1.06 -0.01 -0.16 -0.3 -0.14 -0.39 -0.21 -0.46 0.12 0.18 -0.27 -0.27 0.3 0.64 -0.9 -0.95 -0.99 -0.75
-2.29 -0.91 0.32 1.2 1.68 1.89 1.33 0.52 -0.18 -0.69 -1.31 -2.47 2.85 -1.22 -3.38 0.56 -3.02 -5.1 -1.94 -8.77 -5.64 -4.06 -1.02 -1.71 -0.06 -0.0 -0.47 -0.27 -2.49 -1.45 -3.3 -3.44

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.