Heatmap: Cluster_225 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.59 -0.2 -0.24 0.4 0.74 1.49 0.38 1.07 0.28 -0.8 -0.24 -1.47 -0.41 -1.93 -1.53 -1.05 -2.33 -0.36 -1.64 -1.4 -2.09 1.66 -0.15 -1.34 0.46 -0.01
1.19 -0.06 -0.01 -0.08 -0.91 -0.14 0.41 0.57 -0.52 -1.0 -0.36 -0.5 0.76 -1.57 -0.45 -1.0 -1.18 0.23 -0.39 -1.13 -2.86 1.52 0.36 -1.62 1.02 0.17
0.03 -0.01 -0.16 0.35 0.28 0.8 0.15 0.95 0.07 -0.2 -0.38 0.1 0.86 -1.77 -1.91 -2.11 -1.03 0.57 -0.14 -0.89 -3.08 1.1 -0.25 -3.34 0.54 0.47
-1.22 -1.73 -0.14 0.9 -0.69 1.1 1.28 0.16 -0.16 -0.58 -0.88 -0.32 0.89 -0.53 -0.74 -2.61 -4.74 -0.68 -1.8 -2.52 -1.63 1.58 0.21 -4.34 1.37 0.82
0.87 -0.25 -0.4 -1.13 -0.68 0.0 0.59 -0.19 -0.56 0.12 -0.09 -1.04 0.27 0.16 0.91 -0.65 -0.92 0.34 0.2 -0.56 - 1.33 0.69 -0.98 0.0 -0.29

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.