Heatmap: Cluster_194 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.04 0.53 0.0 1.89 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.08 0.52 1.61 0.51
2.62 3.49 2.38 2.71 5.85 5.82 8.98 4.76 2.89 5.17 3.3 2.31 1.18 0.65 2.49 0.99 3.18 1.77 10.14 0.0 3.13 0.22 1.75 1.7 3.29 2.38 6.48 5.83 2.76 3.15 3.69 2.93
14.82 22.76 44.97 73.39 84.92 83.97 76.4 54.88 59.84 41.57 32.06 18.82 71.52 34.71 3.46 96.88 101.95 39.21 89.98 29.94 67.99 0.38 107.07 88.19 82.99 40.21 79.42 87.59 88.99 107.19 39.79 47.75
0.3 0.26 0.24 0.47 1.0 0.94 1.23 0.7 0.82 1.35 0.69 0.64 0.0 0.08 0.22 0.19 0.51 0.23 2.95 0.0 0.0 0.0 0.15 0.23 0.0 0.7 1.37 1.06 0.83 0.7 0.99 0.8
2.94 3.83 3.21 4.3 4.81 4.7 4.0 3.6 4.14 2.97 2.83 3.59 0.28 1.56 1.8 0.58 4.38 3.84 9.24 0.0 0.11 0.0 4.09 2.18 3.64 4.31 6.42 7.29 4.04 4.72 1.95 1.61
134.33 224.54 126.2 101.63 88.53 60.6 33.53 16.86 15.84 17.2 20.93 26.55 49.72 79.81 91.03 92.16 330.09 155.19 474.62 18.87 36.62 0.45 388.12 581.05 543.79 29.82 93.69 89.13 59.51 85.2 124.8 111.35
13.77 22.67 35.05 47.07 51.18 104.79 75.35 68.13 58.97 37.84 36.97 18.2 52.99 36.07 14.52 63.85 123.87 50.41 79.26 4.02 12.11 0.93 96.02 82.08 37.5 72.77 53.29 73.16 98.77 86.39 54.18 46.5
14.71 25.1 25.06 108.76 266.83 192.14 32.58 7.41 1.06 0.0 0.62 1.98 73.86 32.14 24.07 197.45 649.17 225.31 477.8 1.45 8.78 2.04 620.38 473.46 21.4 10.12 199.41 143.91 33.24 25.08 56.86 72.05
27.17 41.1 50.54 72.25 111.74 125.19 154.32 195.53 129.33 134.34 105.19 79.01 100.83 27.46 43.32 106.42 92.67 108.42 135.88 0.0 2.48 0.0 108.31 93.81 3.88 229.27 140.14 150.69 114.23 104.44 112.41 141.01
1.65 4.23 5.29 5.0 7.17 5.52 4.04 2.91 3.21 3.58 2.2 1.85 0.27 0.06 0.57 0.33 15.51 13.98 20.88 0.3 1.14 2.33 18.65 14.33 11.08 3.07 7.65 5.78 5.59 5.38 2.33 4.25
6.17 7.99 8.4 8.1 9.2 9.28 7.21 7.44 6.22 6.22 7.04 5.66 2.87 3.7 2.92 2.25 6.02 8.75 6.28 0.1 1.53 0.62 4.66 3.53 1.42 1.68 3.91 5.03 6.57 8.19 6.36 6.91
20.43 24.15 30.28 36.45 44.4 42.51 35.82 35.32 28.42 24.9 26.18 22.45 11.31 10.64 9.87 19.86 53.35 30.2 44.81 8.25 23.41 11.98 39.59 31.28 51.17 24.18 43.73 41.85 48.45 50.28 30.0 28.61
52.6 66.25 81.66 90.23 123.1 101.65 58.83 39.23 41.51 43.57 39.5 40.62 44.53 20.39 15.38 57.34 142.72 51.14 165.08 17.76 97.13 20.94 172.28 154.0 221.34 64.73 108.18 165.48 64.3 73.86 34.01 34.77
3.16 12.08 7.68 12.15 2.37 11.33 1.27 0.4 0.59 0.77 0.0 0.19 0.0 0.0 0.0 0.49 26.72 0.54 29.73 1.69 1.86 0.36 15.56 10.58 22.36 3.07 10.62 12.76 5.99 7.78 2.47 2.62
13.4 10.85 15.81 8.29 8.17 11.96 11.37 8.39 14.39 11.55 8.37 10.09 1.17 0.89 0.0 5.13 27.14 65.19 108.29 10.72 34.22 0.0 12.57 8.09 8.39 16.99 11.01 14.12 26.82 30.81 10.19 10.36
21.03 27.46 23.23 22.44 30.72 37.07 27.87 26.94 23.58 18.6 18.49 17.28 12.55 9.02 17.62 10.74 32.16 36.95 23.0 3.0 12.4 6.8 19.36 16.58 19.52 5.28 22.18 23.08 25.71 27.55 22.82 25.29
2.05 1.85 4.0 5.07 5.52 6.46 2.5 2.71 4.1 2.92 0.78 1.26 3.7 0.92 0.56 10.29 9.9 0.19 14.5 0.0 0.94 0.0 18.42 24.23 24.59 10.17 13.69 16.02 6.41 5.74 3.52 2.74
60.27 273.77 232.32 225.69 179.97 88.36 38.5 12.78 4.02 2.53 0.64 3.25 136.59 39.03 42.4 206.75 398.99 310.71 289.52 0.54 0.63 0.0 417.74 393.48 3.06 6.66 128.47 111.5 117.92 106.56 135.25 96.31
0.3 0.13 0.24 0.11 0.26 0.28 0.31 0.25 0.45 0.29 0.28 0.2 0.11 0.09 0.13 0.11 0.35 0.49 1.49 0.05 0.18 0.0 0.21 0.1 0.52 0.28 0.25 0.21 0.41 0.55 0.26 0.15
1.11 0.62 0.99 0.8 0.98 0.74 1.94 1.11 1.54 2.3 1.2 1.41 0.5 0.1 0.02 6.16 2.3 9.11 11.55 0.15 0.0 1.71 0.11 0.74 2.24 0.81 0.08 0.08 5.39 3.6 4.24 3.58
0.14 0.14 0.0 0.0 0.32 0.21 0.37 0.0 0.44 0.5 0.0 0.41 0.0 0.0 0.09 0.22 2.84 6.94 7.04 0.0 0.0 0.0 0.54 0.13 0.0 0.0 0.0 0.73 2.18 2.46 0.52 1.39
0.28 0.22 0.5 0.15 0.77 0.25 0.27 0.07 0.07 0.06 0.18 0.08 0.18 0.0 0.0 0.29 0.74 1.12 1.87 0.0 0.0 0.39 0.36 0.21 0.48 0.18 0.31 0.2 0.41 1.1 0.58 0.36
0.28 0.07 0.15 0.26 0.84 0.22 1.34 1.22 0.67 0.56 1.1 0.53 0.06 0.04 0.63 0.06 0.38 0.65 2.36 0.14 0.42 0.15 0.46 0.28 0.31 0.82 1.85 1.62 0.51 0.89 0.32 0.26
0.05 0.04 0.07 0.14 0.22 0.48 0.83 0.29 0.25 0.37 0.43 0.13 0.0 0.05 0.05 0.11 0.39 0.72 1.9 0.05 0.0 0.0 0.37 0.13 0.0 0.1 1.02 0.44 0.84 0.41 0.36 0.09
0.2 0.0 0.0 0.0 0.34 0.0 0.53 0.0 0.15 0.14 0.0 0.42 1.03 0.64 0.49 0.65 0.97 0.09 2.69 0.0 0.0 0.0 0.31 0.15 0.0 1.01 0.35 0.0 0.5 1.25 0.14 0.72
0.65 1.48 3.0 10.62 63.3 77.21 28.1 5.49 1.23 1.37 0.72 0.49 2.58 5.96 8.1 13.96 150.36 39.35 55.1 4.14 24.28 1.98 169.7 61.87 44.45 2.02 76.25 83.94 5.97 5.18 1.83 2.08
0.22 0.22 0.33 0.25 0.22 0.29 0.4 0.46 0.42 0.42 0.31 0.15 0.35 0.2 0.57 0.23 0.13 0.2 1.61 0.25 0.03 0.0 0.14 0.15 0.65 0.75 1.25 1.12 0.11 0.17 0.19 0.1
0.0 0.0 0.0 0.0 0.0 0.0 0.19 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.3 0.06 0.0 0.0 0.05 0.05 0.0 0.1 0.14 0.24 0.05 0.05 0.0 0.0
7.29 14.8 16.67 18.57 23.26 26.37 11.84 7.24 10.14 5.48 5.04 3.58 0.76 0.14 0.38 1.11 19.41 8.88 8.16 0.05 3.06 0.22 22.33 9.64 25.78 5.24 21.6 18.82 14.43 16.95 5.65 6.78
0.2 0.09 0.26 0.19 0.35 0.45 0.47 0.56 0.34 0.18 0.18 0.19 0.0 0.15 0.19 0.1 0.2 0.38 1.64 0.0 0.15 0.19 0.54 0.26 0.35 0.39 0.86 0.59 0.39 0.41 0.25 0.2
2.98 4.52 4.53 6.02 12.74 15.74 12.42 11.14 5.54 2.96 3.15 2.98 5.3 4.81 4.28 3.66 12.17 4.97 9.51 8.82 7.22 4.66 12.87 7.91 12.1 7.74 14.32 18.28 7.56 6.97 3.16 2.04
0.74 2.07 2.18 3.99 6.03 7.55 6.54 3.8 2.96 2.71 2.29 1.61 1.22 1.47 4.22 2.08 11.56 5.51 3.2 5.02 0.09 0.34 7.76 3.68 1.02 1.17 10.31 9.35 4.36 4.39 2.52 2.83
1.14 1.23 1.32 1.1 0.98 1.66 2.33 1.53 1.27 0.79 0.93 1.33 0.0 0.13 0.18 0.13 1.61 0.51 2.8 0.06 0.0 0.0 1.03 0.45 0.58 0.73 2.89 1.94 1.18 1.13 0.85 0.83
0.04 0.04 0.0 0.03 0.0 0.18 0.0 0.07 0.1 0.03 0.0 0.04 0.11 0.0 0.0 0.15 0.28 0.24 0.56 0.0 0.0 0.0 0.19 0.34 0.0 0.24 0.1 0.15 0.35 0.11 0.16 0.2
0.39 0.15 0.5 0.45 0.64 0.29 0.17 0.32 0.57 0.21 0.24 0.34 0.08 0.13 0.24 0.48 0.96 1.03 1.35 0.0 0.0 0.21 0.45 0.34 0.56 0.25 0.24 0.22 0.77 0.8 0.49 0.79
0.0 0.01 0.0 0.0 0.0 0.0 0.04 0.01 0.04 0.02 0.0 0.01 0.0 0.0 0.02 0.0 0.03 0.0 0.23 0.0 0.0 0.0 0.03 0.04 0.0 0.09 0.0 0.0 0.08 0.13 0.06 0.03
0.79 0.88 0.88 1.16 0.41 0.92 0.8 0.78 1.07 1.08 1.22 1.16 0.18 0.1 0.6 0.12 3.98 3.45 11.04 0.0 0.0 0.0 0.74 0.11 0.13 0.82 0.55 0.67 3.06 3.57 1.04 1.34
0.78 1.86 0.69 0.88 1.01 2.33 2.03 2.1 1.97 1.82 1.61 1.53 0.36 1.31 3.35 0.39 3.39 3.4 6.74 0.24 0.53 0.0 2.84 3.7 1.07 1.61 3.38 2.61 3.09 3.65 1.38 1.38
0.73 1.1 2.81 1.12 0.97 1.69 1.33 1.04 0.8 0.18 0.67 0.33 0.04 0.05 0.17 0.0 2.28 2.38 0.09 0.24 0.45 0.0 0.35 0.14 0.0 0.13 1.02 1.14 1.36 2.5 0.95 3.23
0.94 1.06 0.98 1.06 1.3 2.9 2.58 1.47 2.07 1.61 1.26 0.8 0.25 0.14 0.72 0.44 1.46 0.82 6.88 0.0 0.09 0.0 1.31 0.8 2.02 0.45 2.5 3.25 1.75 2.55 1.19 0.99
65.75 71.37 62.5 58.83 79.77 78.34 67.93 63.53 54.7 45.54 50.43 43.99 25.9 48.86 35.7 43.79 77.16 83.32 68.56 14.61 27.52 30.39 50.96 52.23 44.96 24.2 59.19 55.87 70.31 70.56 67.0 72.09
5.45 10.56 10.19 8.21 10.48 6.69 2.91 2.05 1.41 1.17 0.64 1.26 0.07 0.19 0.11 0.1 9.01 4.98 19.6 8.2 2.75 0.0 14.44 5.19 9.99 4.11 7.16 8.84 2.15 2.03 0.68 0.64
6.73 13.86 15.52 13.43 16.89 17.38 14.27 8.47 12.01 7.82 7.82 7.77 0.34 1.66 3.29 6.13 28.88 21.68 35.97 0.15 1.25 0.46 19.57 15.07 14.18 5.25 20.31 29.04 21.49 27.25 15.1 13.11
1408.03 3246.24 3733.68 3658.71 3110.6 3102.16 2888.13 900.64 989.04 492.8 578.57 523.29 33.3 219.1 0.93 53.39 4671.23 6279.17 1749.49 229.02 1004.25 4.45 2322.94 876.52 2276.39 31.92 2954.26 3211.33 2191.09 2430.51 3410.3 4386.71
107.59 130.89 200.34 201.55 240.88 216.6 204.09 133.61 101.24 84.03 81.0 52.56 90.27 95.21 38.42 189.43 311.38 205.26 252.89 53.46 188.23 27.1 438.06 326.66 185.52 117.89 129.99 162.4 193.36 190.13 175.09 138.08
0.01 0.17 0.03 0.12 0.18 0.61 0.22 0.15 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.31 0.02 0.38 0.0 0.22 0.0 0.36 0.13 0.34 0.09 0.59 0.48 0.04 0.0 0.04 0.0
5.57 7.74 8.32 8.03 10.39 10.89 10.45 10.11 8.48 7.77 6.46 7.4 3.51 2.2 2.33 8.35 7.81 8.38 10.44 1.57 0.86 0.0 7.7 5.22 2.79 3.49 4.97 8.47 8.81 8.05 5.83 7.24
1.46 2.15 2.74 4.17 1.63 2.45 2.13 1.88 2.95 2.35 2.17 1.95 0.68 0.27 0.33 1.53 4.26 2.09 8.14 0.0 0.0 2.0 2.64 2.87 0.67 1.22 2.64 5.0 2.27 2.42 1.5 1.3
0.19 0.45 0.0 0.37 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.35 6.1 2.38 0.0 0.0 0.0 0.27 0.24 0.0 0.0 0.0 0.0 2.39 1.28 2.34 0.74
3.8 6.3 4.9 7.07 12.37 11.89 6.33 5.05 2.88 4.01 2.3 1.84 4.45 1.64 1.73 6.39 7.72 6.49 10.14 4.36 5.38 0.92 11.16 9.77 15.51 4.88 11.19 14.11 3.69 3.43 3.02 2.8
38.23 47.86 55.23 52.32 51.55 62.28 45.26 37.38 32.37 24.42 29.65 26.87 21.94 29.95 36.05 29.36 57.47 49.08 33.93 34.13 27.11 36.5 33.08 30.61 75.88 24.66 68.41 82.03 42.58 44.82 14.22 14.29
3.31 3.14 2.71 2.93 6.87 5.87 8.26 7.88 7.26 6.55 5.47 4.72 2.03 1.55 3.7 3.92 4.29 2.66 10.48 0.04 0.0 0.33 4.52 4.72 0.58 5.62 6.03 10.39 5.29 5.4 7.4 4.94
0.76 1.3 2.14 1.31 1.28 1.51 1.03 0.94 1.28 0.68 0.95 0.61 0.39 0.0 0.01 0.15 1.97 5.27 0.08 0.0 0.08 0.0 0.25 0.08 0.07 0.85 3.56 1.92 0.97 1.02 3.81 4.74
29.31 39.03 40.62 45.57 43.19 42.18 54.31 38.84 43.13 33.42 33.16 30.21 32.95 33.02 44.28 45.24 49.37 41.96 41.62 47.3 47.06 27.03 41.26 37.98 50.82 27.91 54.07 56.88 48.18 48.79 30.93 23.38
5.31 9.31 12.46 7.39 9.95 9.74 7.21 5.94 6.79 5.81 6.73 6.64 0.37 0.32 2.25 1.79 11.5 6.61 35.55 6.87 1.53 0.45 8.22 1.79 15.43 3.32 10.81 7.01 10.85 12.21 5.6 4.52
0.22 0.27 0.22 0.65 0.4 0.92 1.07 1.3 0.72 0.68 0.39 0.26 0.05 0.07 1.11 0.2 0.94 0.74 3.15 0.04 0.0 0.0 0.55 0.43 1.24 0.35 2.41 1.68 0.9 0.6 0.34 0.14
3.2 1.68 2.46 3.8 3.88 6.15 6.93 7.67 6.69 5.93 5.03 4.46 1.42 2.24 4.41 2.94 4.24 4.6 12.24 0.0 2.26 0.08 3.47 3.01 1.74 4.13 6.29 6.91 5.34 6.3 9.15 7.84

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)