Heatmap: Cluster_194 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
- - - - - - - - - - - - - - - 2.22 1.25 - 3.08 - - - - - - - - - 2.26 1.2 2.84 1.19
-0.37 0.05 -0.5 -0.31 0.79 0.79 1.41 0.5 -0.22 0.62 -0.03 -0.55 -1.51 -2.39 -0.44 -1.78 -0.09 -0.93 1.59 - -0.11 -3.94 -0.95 -0.99 -0.04 -0.5 0.94 0.79 -0.29 -0.1 0.13 -0.2
-2.01 -1.39 -0.41 0.3 0.51 0.49 0.35 -0.12 0.0 -0.52 -0.9 -1.67 0.26 -0.78 -4.11 0.7 0.77 -0.61 0.59 -1.0 0.19 -7.31 0.84 0.56 0.47 -0.57 0.41 0.55 0.57 0.84 -0.59 -0.32
-1.04 -1.24 -1.34 -0.4 0.71 0.61 1.0 0.19 0.42 1.13 0.17 0.07 - -2.88 -1.47 -1.73 -0.27 -1.39 2.26 - - - -2.07 -1.42 - 0.2 1.16 0.79 0.44 0.18 0.69 0.38
-0.19 0.2 -0.06 0.36 0.52 0.49 0.26 0.1 0.31 -0.17 -0.24 0.1 -3.57 -1.1 -0.89 -2.52 0.39 0.2 1.47 - -4.92 - 0.29 -0.62 0.12 0.37 0.94 1.12 0.27 0.5 -0.78 -1.06
-0.0 0.74 -0.09 -0.4 -0.6 -1.15 -2.0 -3.0 -3.09 -2.97 -2.68 -2.34 -1.43 -0.75 -0.56 -0.54 1.3 0.21 1.82 -2.83 -1.88 -8.21 1.53 2.11 2.02 -2.17 -0.52 -0.59 -1.18 -0.66 -0.11 -0.27
-1.95 -1.24 -0.61 -0.18 -0.06 0.97 0.5 0.35 0.14 -0.5 -0.53 -1.55 -0.01 -0.57 -1.88 0.26 1.21 -0.08 0.57 -3.73 -2.14 -5.84 0.85 0.62 -0.51 0.45 -0.0 0.45 0.89 0.69 0.02 -0.2
-3.1 -2.32 -2.33 -0.21 1.09 0.61 -1.95 -4.08 -6.89 - -7.66 -5.99 -0.77 -1.97 -2.39 0.65 2.37 0.84 1.93 -6.44 -3.84 -5.94 2.3 1.91 -2.55 -3.64 0.67 0.19 -1.92 -2.33 -1.15 -0.8
-1.81 -1.21 -0.91 -0.4 0.23 0.4 0.7 1.04 0.44 0.5 0.15 -0.27 0.09 -1.79 -1.13 0.16 -0.04 0.19 0.52 - -5.26 - 0.19 -0.02 -4.61 1.27 0.56 0.66 0.27 0.14 0.24 0.57
-1.77 -0.41 -0.09 -0.17 0.35 -0.03 -0.48 -0.95 -0.81 -0.65 -1.35 -1.61 -4.37 -6.5 -3.31 -4.11 1.46 1.31 1.89 -4.24 -2.3 -1.27 1.73 1.35 0.98 -0.87 0.44 0.04 -0.01 -0.07 -1.27 -0.41
0.2 0.57 0.64 0.59 0.77 0.79 0.42 0.47 0.21 0.21 0.39 0.07 -0.91 -0.54 -0.88 -1.26 0.16 0.7 0.22 -5.79 -1.82 -3.12 -0.21 -0.61 -1.93 -1.68 -0.46 -0.1 0.29 0.61 0.24 0.36
-0.59 -0.35 -0.02 0.25 0.53 0.47 0.22 0.2 -0.11 -0.3 -0.23 -0.45 -1.44 -1.53 -1.64 -0.63 0.79 -0.03 0.54 -1.9 -0.39 -1.36 0.36 0.02 0.73 -0.35 0.51 0.44 0.66 0.71 -0.04 -0.1
-0.57 -0.24 0.06 0.21 0.65 0.38 -0.41 -1.0 -0.91 -0.84 -0.99 -0.95 -0.81 -1.94 -2.35 -0.45 0.87 -0.61 1.08 -2.14 0.31 -1.9 1.14 0.98 1.5 -0.27 0.47 1.08 -0.28 -0.08 -1.2 -1.17
-1.03 0.9 0.25 0.91 -1.45 0.81 -2.35 -4.03 -3.47 -3.08 -31.16 -5.06 - - - -3.73 2.05 -3.58 2.2 -1.94 -1.8 -4.15 1.27 0.71 1.79 -1.08 0.71 0.98 -0.11 0.27 -1.39 -1.31
-0.32 -0.62 -0.08 -1.01 -1.03 -0.48 -0.56 -0.99 -0.22 -0.53 -1.0 -0.73 -3.84 -4.22 - -1.7 0.7 1.96 2.7 -0.64 1.03 - -0.41 -1.05 -0.99 0.02 -0.6 -0.24 0.68 0.88 -0.71 -0.69
0.01 0.4 0.16 0.11 0.56 0.83 0.42 0.37 0.18 -0.16 -0.17 -0.27 -0.73 -1.21 -0.24 -0.95 0.63 0.83 0.14 -2.8 -0.75 -1.61 -0.1 -0.33 -0.09 -1.98 0.09 0.15 0.3 0.4 0.13 0.28
-1.65 -1.8 -0.69 -0.34 -0.22 0.01 -1.36 -1.25 -0.65 -1.14 -3.05 -2.35 -0.8 -2.8 -3.52 0.68 0.62 -5.12 1.17 - -2.77 - 1.52 1.91 1.94 0.66 1.09 1.32 -0.01 -0.16 -0.87 -1.23
-1.08 1.11 0.87 0.83 0.5 -0.52 -1.72 -3.31 -4.98 -5.65 -7.63 -5.29 0.1 -1.7 -1.58 0.7 1.65 1.29 1.19 -7.89 -7.65 - 1.72 1.63 -5.38 -4.25 0.02 -0.19 -0.11 -0.25 0.09 -0.4
0.08 -1.17 -0.23 -1.33 -0.11 -0.03 0.13 -0.18 0.66 0.04 -0.01 -0.5 -1.33 -1.67 -1.07 -1.38 0.31 0.8 2.4 -2.56 -0.64 - -0.46 -1.53 0.88 0.01 -0.16 -0.46 0.52 0.97 -0.1 -0.91
-0.92 -1.76 -1.09 -1.39 -1.1 -1.5 -0.12 -0.92 -0.45 0.13 -0.81 -0.57 -2.07 -4.39 -6.95 1.55 0.13 2.12 2.46 -3.77 - -0.3 -4.29 -1.5 0.09 -1.37 -4.64 -4.73 1.36 0.78 1.01 0.77
-2.61 -2.65 - - -1.42 -2.04 -1.22 - -0.97 -0.8 - -1.06 - - -3.19 -2.0 1.72 3.01 3.03 - - - -0.67 -2.78 - - - -0.24 1.34 1.51 -0.73 0.69
-0.41 -0.7 0.44 -1.27 1.07 -0.53 -0.45 -2.4 -2.31 -2.5 -1.02 -2.25 -0.98 - - -0.33 1.02 1.62 2.36 - - 0.08 -0.03 -0.82 0.39 -0.99 -0.23 -0.87 0.15 1.59 0.67 -0.03
-1.1 -3.19 -1.99 -1.24 0.46 -1.44 1.14 1.01 0.14 -0.12 0.85 -0.2 -3.42 -3.76 0.05 -3.35 -0.67 0.11 1.95 -2.13 -0.52 -2.05 -0.4 -1.12 -0.96 0.44 1.6 1.41 -0.27 0.54 -0.91 -1.22
-2.76 -3.01 -2.18 -1.19 -0.55 0.58 1.36 -0.17 -0.39 0.21 0.43 -1.35 - -2.61 -2.79 -1.52 0.27 1.16 2.56 -2.6 - - 0.19 -1.27 - -1.68 1.66 0.43 1.38 0.36 0.16 -1.91
-1.01 - - - -0.24 - 0.41 - -1.38 -1.55 - 0.07 1.37 0.69 0.3 0.7 1.28 -2.19 2.76 - - - -0.35 -1.45 - 1.34 -0.17 - 0.34 1.64 -1.48 0.85
-5.52 -4.33 -3.31 -1.49 1.09 1.37 -0.08 -2.44 -4.6 -4.45 -5.37 -5.91 -3.53 -2.32 -1.88 -1.09 2.34 0.4 0.89 -2.85 -0.29 -3.91 2.51 1.06 0.58 -3.88 1.36 1.5 -2.32 -2.52 -4.02 -3.84
-0.78 -0.73 -0.18 -0.58 -0.75 -0.38 0.1 0.31 0.19 0.16 -0.27 -1.28 -0.08 -0.86 0.61 -0.66 -1.56 -0.87 2.11 -0.57 -3.48 - -1.39 -1.29 0.8 1.01 1.75 1.59 -1.7 -1.17 -0.99 -1.86
- - - - - - 2.23 - - - - - 0.44 - - - - - 2.9 0.6 - - 0.27 0.25 - 1.38 1.78 2.6 0.25 0.34 - -
-0.54 0.48 0.65 0.81 1.13 1.31 0.16 -0.55 -0.07 -0.95 -1.07 -1.57 -3.8 -6.26 -4.8 -3.26 0.87 -0.26 -0.38 -7.88 -1.79 -5.61 1.07 -0.14 1.28 -1.02 1.03 0.83 0.44 0.68 -0.91 -0.65
-0.72 -1.86 -0.33 -0.82 0.06 0.43 0.48 0.76 0.04 -0.88 -0.89 -0.85 - -1.2 -0.82 -1.78 -0.77 0.18 2.29 - -1.11 -0.82 0.7 -0.38 0.05 0.22 1.37 0.81 0.22 0.28 -0.42 -0.75
-1.35 -0.75 -0.75 -0.34 0.75 1.05 0.71 0.55 -0.46 -1.36 -1.27 -1.35 -0.52 -0.66 -0.83 -1.05 0.68 -0.61 0.32 0.22 -0.07 -0.71 0.76 0.06 0.67 0.03 0.91 1.27 -0.01 -0.12 -1.26 -1.9
-2.4 -0.91 -0.84 0.04 0.63 0.96 0.75 -0.03 -0.39 -0.52 -0.77 -1.27 -1.68 -1.4 0.12 -0.91 1.57 0.5 -0.28 0.37 -5.36 -3.53 0.99 -0.08 -1.93 -1.73 1.4 1.26 0.16 0.17 -0.63 -0.46
0.16 0.26 0.37 0.11 -0.05 0.7 1.19 0.59 0.31 -0.36 -0.13 0.38 - -2.94 -2.52 -2.98 0.66 -1.0 1.46 -4.11 - - 0.01 -1.17 -0.82 -0.48 1.5 0.93 0.21 0.14 -0.26 -0.3
-1.4 -1.49 - -2.11 - 0.61 - -0.7 -0.28 -1.86 - -1.42 -0.08 - - 0.34 1.28 1.04 2.28 - - - 0.68 1.57 - 1.04 -0.24 0.42 1.59 -0.06 0.47 0.76
-0.13 -1.55 0.23 0.08 0.57 -0.54 -1.31 -0.41 0.42 -1.01 -0.81 -0.34 -2.43 -1.67 -0.83 0.17 1.17 1.27 1.66 - - -0.99 0.08 -0.34 0.39 -0.78 -0.86 -0.94 0.85 0.9 0.21 0.88
-2.5 -1.11 - - - - 0.48 -1.37 0.43 -0.23 - -1.2 - - -0.64 - 0.13 - 3.09 - - - 0.22 0.7 - 1.66 - - 1.6 2.24 1.03 -0.05
-0.75 -0.6 -0.6 -0.2 -1.69 -0.53 -0.74 -0.77 -0.32 -0.3 -0.13 -0.2 -2.87 -3.79 -1.14 -3.53 1.58 1.37 3.05 - - - -0.86 -3.54 -3.34 -0.7 -1.27 -0.99 1.2 1.42 -0.36 0.0
-1.34 -0.08 -1.52 -1.16 -0.96 0.24 0.04 0.1 0.0 -0.11 -0.29 -0.36 -2.47 -0.59 0.77 -2.35 0.78 0.79 1.78 -3.05 -1.91 - 0.53 0.91 -0.88 -0.29 0.78 0.41 0.65 0.89 -0.52 -0.51
-0.32 0.27 1.62 0.29 0.08 0.89 0.53 0.18 -0.19 -2.34 -0.46 -1.49 -4.65 -4.22 -2.39 - 1.32 1.38 -3.38 -1.96 -1.03 - -1.38 -2.73 - -2.82 0.16 0.32 0.57 1.45 0.05 1.82
-0.6 -0.43 -0.54 -0.42 -0.13 1.02 0.86 0.04 0.54 0.18 -0.17 -0.84 -2.51 -3.37 -0.98 -1.7 0.03 -0.8 2.27 - -3.99 - -0.13 -0.83 0.5 -1.65 0.81 1.19 0.3 0.84 -0.27 -0.52
0.25 0.37 0.18 0.09 0.53 0.51 0.3 0.2 -0.01 -0.28 -0.13 -0.33 -1.09 -0.18 -0.63 -0.33 0.48 0.59 0.31 -1.92 -1.0 -0.86 -0.11 -0.08 -0.3 -1.19 0.1 0.02 0.35 0.35 0.28 0.39
0.11 1.07 1.02 0.7 1.06 0.41 -0.79 -1.29 -1.84 -2.11 -2.99 -2.01 -6.12 -4.7 -5.5 -5.66 0.84 -0.02 1.96 0.7 -0.87 - 1.52 0.04 0.99 -0.3 0.51 0.81 -1.23 -1.31 -2.89 -2.98
-0.97 0.07 0.23 0.03 0.36 0.4 0.11 -0.64 -0.13 -0.75 -0.76 -0.76 -5.27 -2.99 -2.0 -1.11 1.13 0.72 1.45 -6.43 -3.4 -4.86 0.57 0.19 0.1 -1.33 0.62 1.14 0.7 1.05 0.2 -0.01
-0.48 0.72 0.92 0.89 0.66 0.66 0.55 -1.13 -0.99 -2.0 -1.77 -1.91 -5.88 -3.17 -11.05 -5.2 1.25 1.67 -0.17 -3.1 -0.97 -8.79 0.24 -1.17 0.21 -5.95 0.59 0.71 0.16 0.3 0.79 1.16
-0.61 -0.33 0.28 0.29 0.55 0.4 0.31 -0.3 -0.7 -0.97 -1.02 -1.65 -0.87 -0.79 -2.1 0.2 0.92 0.32 0.62 -1.62 0.19 -2.6 1.41 0.99 0.17 -0.48 -0.34 -0.02 0.23 0.21 0.09 -0.25
-4.23 0.25 -2.12 -0.25 0.35 2.09 0.63 0.05 - -1.0 - - - - - - 1.11 -2.68 1.42 - 0.63 - 1.32 -0.1 1.24 -0.69 2.05 1.75 -1.73 - -1.71 -
-0.23 0.24 0.35 0.29 0.67 0.73 0.67 0.63 0.37 0.25 -0.02 0.18 -0.9 -1.57 -1.49 0.35 0.25 0.36 0.67 -2.07 -2.93 - 0.23 -0.33 -1.23 -0.91 -0.4 0.37 0.43 0.3 -0.17 0.15
-0.58 -0.02 0.33 0.93 -0.43 0.17 -0.04 -0.22 0.43 0.11 -0.01 -0.16 -1.69 -3.01 -2.72 -0.51 0.96 -0.06 1.9 - - -0.13 0.27 0.39 -1.71 -0.84 0.28 1.2 0.06 0.15 -0.54 -0.74
-1.68 -0.4 - -0.7 - - - - - - - - - - - - 1.98 3.35 2.0 - - - -1.17 -1.34 - - - - 2.0 1.1 1.97 0.32
-0.7 0.03 -0.33 0.2 1.0 0.95 0.04 -0.29 -1.1 -0.62 -1.42 -1.75 -0.47 -1.91 -1.83 0.05 0.32 0.07 0.72 -0.5 -0.2 -2.75 0.85 0.66 1.33 -0.34 0.86 1.19 -0.74 -0.85 -1.03 -1.14
-0.08 0.25 0.45 0.38 0.36 0.63 0.17 -0.11 -0.32 -0.72 -0.44 -0.58 -0.88 -0.43 -0.16 -0.46 0.51 0.28 -0.25 -0.24 -0.57 -0.14 -0.28 -0.4 0.91 -0.71 0.76 1.03 0.08 0.15 -1.5 -1.5
-0.49 -0.56 -0.78 -0.67 0.56 0.34 0.83 0.76 0.64 0.49 0.23 0.02 -1.2 -1.59 -0.33 -0.25 -0.12 -0.8 1.17 -6.79 - -3.8 -0.04 0.02 -3.01 0.27 0.37 1.16 0.19 0.22 0.67 0.09
-0.68 0.1 0.81 0.1 0.07 0.31 -0.24 -0.38 0.07 -0.84 -0.36 -1.0 -1.66 - -6.8 -3.0 0.7 2.11 -3.94 - -3.95 - -2.28 -3.94 -4.21 -0.51 1.55 0.66 -0.33 -0.26 1.65 1.96
-0.47 -0.06 -0.0 0.16 0.08 0.05 0.42 -0.07 0.08 -0.29 -0.3 -0.43 -0.31 -0.3 0.12 0.15 0.28 0.04 0.03 0.22 0.21 -0.59 0.02 -0.1 0.32 -0.55 0.41 0.48 0.24 0.26 -0.4 -0.8
-0.5 0.31 0.73 -0.02 0.41 0.38 -0.06 -0.34 -0.15 -0.37 -0.16 -0.18 -4.34 -4.53 -1.74 -2.07 0.61 -0.18 2.24 -0.13 -2.3 -4.05 0.13 -2.07 1.04 -1.18 0.53 -0.1 0.53 0.7 -0.42 -0.73
-1.67 -1.34 -1.63 -0.09 -0.78 0.42 0.63 0.91 0.06 -0.02 -0.83 -1.38 -3.86 -3.35 0.69 -1.81 0.45 0.11 2.19 -3.98 - - -0.32 -0.67 0.85 -0.97 1.81 1.28 0.39 -0.19 -1.04 -2.29
-0.51 -1.45 -0.9 -0.27 -0.24 0.42 0.6 0.74 0.55 0.37 0.13 -0.04 -1.69 -1.03 -0.05 -0.64 -0.11 0.01 1.42 - -1.02 -5.85 -0.4 -0.6 -1.4 -0.15 0.46 0.59 0.22 0.46 1.0 0.78

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.