Heatmap: Cluster_58 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.04 -0.17 0.1 -0.04 0.49 0.35 0.73 0.63 0.59 0.27 0.34 0.19 0.27 -1.67 -0.59 -0.06 0.16 -0.13 0.52 -3.74 -6.31 - 0.14 -0.08 - -0.19 0.37 0.45 0.76 0.88 -0.55 -0.71
-0.23 -0.1 -0.11 0.07 0.41 0.31 -0.12 -0.2 0.05 -0.34 -0.48 -0.99 0.01 1.36 -0.48 1.12 0.32 -0.22 -0.37 -5.1 -3.68 -2.53 1.14 1.11 -3.09 -1.65 -0.11 0.27 -0.16 0.26 -0.09 0.3
0.09 0.25 0.21 0.06 0.05 0.26 0.17 -0.21 0.16 0.08 -0.0 -0.25 -0.11 1.3 -3.44 0.39 0.3 0.06 -0.96 -2.56 -0.53 -7.33 1.37 1.11 -0.72 -2.18 -0.52 -0.34 0.02 0.13 -0.17 -0.3
-0.11 0.24 0.08 0.04 0.02 0.02 0.13 -0.25 0.09 0.11 -0.05 -0.24 -0.04 1.12 -0.07 0.26 0.31 0.59 -0.51 -6.49 -3.66 -7.45 1.23 1.0 -4.64 -1.19 -0.86 -0.77 0.07 0.18 0.58 0.49
-0.54 -0.32 -0.07 -0.19 0.23 0.13 0.36 -0.02 -0.15 -0.33 -0.22 -0.56 -0.1 0.62 -0.09 0.42 0.68 0.64 0.25 -2.39 -1.01 -3.27 0.24 0.06 -0.32 -0.24 -0.01 0.72 0.29 0.55 0.02 -0.3
-0.04 0.56 0.64 0.48 0.37 0.52 0.3 -0.2 -0.01 -0.07 -0.24 -0.28 0.04 0.83 -0.84 0.47 0.24 0.1 -0.7 -3.37 -1.8 -6.2 1.38 1.08 -2.34 -1.72 -0.85 -0.33 -0.2 0.05 -0.35 -0.15
0.05 0.08 0.29 0.12 0.41 0.31 -0.18 -0.35 -0.34 -0.51 -0.43 -0.78 0.95 2.29 -1.94 1.04 -0.02 0.6 -1.57 - -6.38 - 1.13 1.36 -1.63 -2.62 -1.42 -1.37 -0.63 -0.38 -0.92 -0.68
-0.38 0.14 0.29 0.34 0.06 0.3 0.21 -0.13 0.03 -0.18 -0.21 -0.37 -0.38 1.17 0.56 -0.23 0.17 0.33 -0.77 -1.4 -0.82 -2.16 1.09 0.83 0.42 -2.13 -0.75 -0.46 -0.16 -0.02 -0.41 -0.29
-1.48 -0.42 0.36 0.6 0.8 0.81 0.54 -0.1 -0.38 -0.94 -1.06 -1.56 -0.19 1.06 0.23 -0.32 0.97 0.68 -0.23 -2.23 -1.11 -2.55 0.91 0.56 -2.09 -1.72 0.08 0.34 0.15 0.2 -0.32 -0.67
-0.07 0.41 0.24 0.3 0.19 0.19 0.18 0.05 0.0 0.08 -0.02 -0.12 -0.17 0.93 -0.13 0.02 0.2 -0.2 -0.73 -3.57 -3.22 -2.93 1.26 1.07 -0.34 -0.85 -0.34 0.13 -0.05 0.08 -0.46 -0.41
0.24 0.32 0.28 0.04 -0.09 -0.02 -0.02 -0.79 -0.34 -0.22 -0.48 -0.33 -0.08 0.87 -3.19 0.33 0.63 -0.19 -0.78 -2.48 -1.44 -3.6 1.72 1.48 -0.51 -1.18 -0.82 -0.29 0.31 0.52 -0.33 -0.29
-0.47 0.23 0.25 -0.03 -0.09 -0.02 0.33 -0.45 -0.11 -0.22 -0.51 -0.76 0.15 1.37 -3.74 0.82 0.19 0.05 -1.48 -6.58 -1.91 -7.37 1.86 1.62 -1.88 -3.49 -1.11 -0.3 0.15 0.46 -0.11 -0.25
0.22 0.27 0.06 0.13 -0.16 -0.18 0.19 0.22 0.59 0.66 0.57 0.52 -0.3 0.96 -0.31 -0.32 0.58 0.2 -1.27 -4.92 -4.4 -4.66 1.02 0.44 -2.04 -1.85 -1.04 -1.05 0.19 0.22 0.42 0.42
-0.58 0.19 0.57 0.73 0.86 0.94 -0.22 -0.86 -0.9 -1.22 -1.42 -1.64 -0.83 0.79 -0.59 0.35 1.11 1.04 -0.63 -4.56 -0.48 -4.74 1.03 0.3 -0.49 -1.61 0.2 0.95 0.28 0.45 -2.13 -2.7
-0.68 -0.1 0.14 0.12 0.19 0.4 0.33 -0.03 0.17 0.26 0.14 -0.14 0.06 1.31 0.61 0.45 0.24 -0.74 -1.67 -4.24 -1.98 -4.22 1.58 1.35 -1.74 -1.31 -1.1 -0.31 -0.33 -0.04 -0.87 -0.98
-0.17 -0.09 -0.02 0.12 0.21 0.2 0.15 0.17 0.07 -0.0 -0.04 -0.12 -0.41 0.47 -0.23 0.55 0.23 -0.45 0.42 -0.72 -0.61 -2.75 0.42 0.43 -0.14 -0.07 -0.03 0.13 0.31 0.32 -0.24 -0.76
-0.82 -0.17 -0.02 0.12 0.11 0.24 0.08 -0.45 -0.16 -0.3 -0.57 -0.75 0.34 1.64 0.86 0.72 0.61 0.03 -1.39 -3.52 -1.08 -5.39 1.6 1.14 -0.85 -2.0 -1.02 -0.18 -0.28 0.11 -1.43 -1.34
-0.5 -0.12 0.02 -0.07 -0.03 -0.07 0.17 -0.45 -0.17 -0.28 -0.28 -0.48 0.05 0.78 -1.31 0.37 0.55 0.73 -0.84 -7.47 -3.25 -6.81 1.79 1.4 -1.7 -1.99 -0.87 -0.32 0.4 0.51 0.24 0.24
0.33 0.33 0.2 0.12 -0.01 0.08 0.13 -0.28 0.12 0.07 -0.01 -0.1 -0.29 1.11 -1.13 -0.11 0.61 0.34 -1.44 -7.36 -6.05 -3.5 1.43 1.19 -3.61 -2.04 -1.8 -1.1 0.26 0.53 0.66 0.41
-0.35 -0.34 0.03 0.08 0.16 0.37 0.26 0.11 0.07 -0.18 -0.22 -0.39 -0.52 0.42 0.25 -0.35 0.81 0.12 -0.53 -2.08 -0.23 -1.51 0.08 -0.05 0.61 -1.01 0.48 0.2 0.43 0.29 0.02 -0.08
-0.11 0.73 0.37 -0.13 -0.48 -0.44 0.21 -0.03 -0.13 -0.18 -0.12 -0.17 0.71 0.95 0.28 0.33 0.91 0.51 0.25 -0.69 -1.51 -5.33 0.05 -0.56 -0.35 -1.97 0.45 -0.16 0.59 0.7 -2.06 -3.24
-0.31 0.0 0.11 -0.05 -0.12 -0.04 0.15 -0.21 0.22 0.17 0.16 -0.08 -0.05 1.01 -1.29 0.13 0.23 0.29 -1.34 -4.14 -2.9 -3.37 1.63 1.51 -2.75 -1.72 -0.9 -0.43 0.01 0.21 0.4 0.29
-0.3 0.44 0.57 0.48 0.21 0.3 0.25 -0.42 -0.13 -0.26 -0.39 -0.41 -0.11 1.16 -0.17 0.31 0.79 0.47 -0.95 -5.01 -2.81 -5.55 1.36 0.92 -0.6 -2.59 -1.38 -0.7 0.09 0.32 -0.14 -0.44
-0.46 -0.11 -0.14 -0.3 -0.42 -0.45 0.13 -0.2 0.05 -0.03 -0.15 -0.41 -0.18 1.22 -0.8 0.43 -0.14 -0.23 -0.96 -4.83 -1.01 -3.9 1.63 1.75 -0.87 -1.36 -0.72 -0.34 0.12 0.31 0.23 0.31
-0.22 -0.24 -0.05 0.07 0.04 0.15 0.07 0.09 0.09 -0.04 0.23 -0.07 -0.16 0.57 0.21 0.04 0.33 -0.38 0.26 -1.02 -0.54 -2.03 0.47 0.62 -0.47 -0.07 -0.12 0.15 0.18 0.43 -0.21 -0.58
-0.57 -0.24 0.11 0.13 0.07 0.5 0.74 0.8 0.31 0.27 0.03 -0.19 0.1 -1.11 -0.62 0.14 0.21 0.31 0.24 -2.11 -3.06 -4.19 0.29 0.27 -1.2 -0.12 0.59 0.41 0.41 0.44 -0.49 -0.38
-0.54 -0.81 -0.55 -0.07 0.23 0.45 0.68 0.46 0.76 0.36 0.19 -0.15 -0.26 -0.37 0.19 0.24 0.45 -0.82 -0.11 -2.55 -0.48 -5.0 0.48 0.03 -0.47 -0.01 0.21 -0.23 0.5 0.55 -0.06 -0.19
-0.08 0.18 0.2 0.26 0.46 0.45 0.3 0.04 0.08 -0.01 -0.18 -0.33 0.37 1.4 0.59 0.68 -0.1 0.01 -0.97 -6.71 -2.74 -2.94 1.05 0.8 -2.2 -0.8 0.06 0.11 -0.62 -0.37 -1.13 -1.12
0.11 0.29 0.27 0.47 0.46 0.55 0.21 0.02 0.02 0.11 -0.04 -0.13 -0.58 0.53 0.03 0.1 0.08 -0.42 -0.93 -2.55 -0.01 -2.96 -0.48 -0.62 0.67 -1.0 0.16 0.38 0.23 0.39 -0.07 -0.06
-0.81 0.19 0.34 -0.99 -0.21 -0.06 -0.34 -0.67 -0.99 -1.32 -1.02 -0.62 0.16 1.52 -1.82 0.33 1.47 -0.97 1.6 - -0.19 - 0.86 -0.15 -0.43 -2.45 -0.64 -0.3 0.69 0.83 0.39 -0.52
0.26 0.53 0.27 0.26 0.07 0.14 0.45 -0.11 0.32 0.26 0.27 0.06 -0.81 0.73 0.06 0.16 0.76 -0.35 -1.31 -2.67 -1.54 -5.91 1.27 0.82 -1.18 -2.32 -0.96 -0.15 0.15 0.44 -0.47 -0.79
0.02 0.33 -0.21 0.26 0.33 0.37 0.21 0.19 0.24 -0.1 0.24 0.02 0.75 1.52 -0.95 0.58 -0.39 -0.36 -0.28 -0.54 -0.58 -2.52 0.01 0.46 -0.5 0.06 -0.58 -0.13 -0.53 -0.27 -1.17 -1.36
-0.54 -0.04 0.14 0.09 -0.09 0.02 0.52 0.03 0.54 0.54 0.35 0.12 0.67 1.57 -0.66 0.77 -0.71 -1.0 -1.31 -1.28 -2.87 -3.13 1.27 1.01 -1.08 -1.63 -0.69 -0.29 -0.41 -0.18 -0.98 -0.68
-0.19 -0.03 -0.01 -0.03 -0.24 -0.21 -0.06 0.15 0.16 0.09 0.16 -0.0 -0.43 0.06 0.55 -0.18 0.21 0.3 -0.02 -0.65 -0.34 -2.07 0.09 -0.08 0.63 -0.54 0.3 0.4 0.39 0.53 -0.54 -0.55
-0.75 -0.43 -0.16 -0.29 -0.3 -0.28 0.28 -0.13 -0.05 -0.29 -0.29 -0.82 -0.11 1.49 0.26 0.44 0.21 0.65 -1.88 -5.16 -2.57 -9.17 1.96 1.85 -2.69 -2.86 -1.61 -0.93 0.11 0.17 -0.2 -0.3
-0.11 0.21 0.26 0.22 0.32 0.47 0.26 -0.37 -0.3 -0.55 -0.64 -0.87 -0.04 1.07 -0.48 0.23 0.8 0.59 -0.32 -3.18 -1.19 -5.05 1.26 0.81 -1.19 -2.51 -0.78 -0.31 0.27 0.5 0.02 -0.16
-0.1 0.22 0.31 0.54 0.38 0.26 0.37 -0.05 0.3 0.22 0.18 0.21 -1.02 0.86 -2.51 -1.06 1.08 0.22 -1.05 -3.77 -0.91 -5.49 1.41 0.59 -1.05 -1.37 -1.27 -0.68 0.39 0.43 -0.12 -0.34
-0.56 0.15 0.19 0.29 0.12 0.18 0.27 -0.27 -0.28 -0.21 -0.34 -0.55 -0.23 1.24 0.55 0.25 0.57 0.55 -0.51 -4.09 -2.39 -3.91 1.16 0.85 -2.66 -1.23 0.01 0.61 0.09 0.3 -0.75 -0.9
0.07 0.29 0.12 0.2 0.06 0.09 0.32 -0.49 -0.08 -0.12 -0.39 -0.31 -0.22 1.06 -0.97 0.48 0.69 0.74 -0.73 -12.7 -6.11 - 1.53 1.33 -5.03 -3.55 -1.92 -1.24 0.44 0.69 0.1 -0.0
-0.2 0.19 0.15 0.2 0.02 0.08 0.37 0.11 0.43 0.35 0.3 0.07 0.35 1.36 -0.54 0.19 0.14 0.27 -1.22 -7.59 -2.18 -5.81 1.08 1.01 -2.26 -2.8 -1.77 -1.42 0.06 0.14 0.09 0.45
-0.07 0.26 0.35 0.36 -0.0 0.04 0.09 0.05 0.19 0.2 0.35 -0.12 -0.5 1.31 0.88 0.23 0.04 0.12 0.5 - -3.58 - 0.98 0.85 -1.34 -1.03 -0.66 -0.32 -0.18 -0.08 -1.05 -1.11
-0.5 -0.32 -0.13 0.01 0.13 0.25 0.13 0.0 0.29 0.13 0.18 -0.34 1.29 1.19 -0.82 1.28 -0.32 -0.19 -0.3 -7.66 - - 1.28 1.13 -4.06 -1.62 -0.54 0.05 -0.42 -0.15 -0.69 -0.39
-0.6 -0.15 0.13 0.12 0.24 0.3 0.7 0.74 0.69 0.59 0.18 0.25 -0.08 -1.37 -0.25 0.52 0.56 -0.13 0.66 -5.75 -4.85 -7.6 0.4 0.39 -2.03 -0.73 -0.66 -0.55 0.76 0.78 -0.64 -0.68
-0.25 -0.05 -0.15 -0.18 -0.12 0.13 -0.16 -0.66 -0.51 -0.6 -0.63 -0.91 0.72 1.65 -2.85 1.16 0.28 0.4 -1.01 -2.63 -1.33 -5.21 1.71 1.5 -1.47 -2.38 -0.77 -0.29 -0.14 0.02 -0.29 -0.41
-0.01 0.25 0.36 0.13 -0.08 0.12 -0.05 -0.27 -0.27 -0.34 -0.48 -0.56 0.41 0.93 0.09 0.6 0.28 0.3 0.13 -2.67 -2.38 -2.75 1.07 0.78 -0.63 -0.22 -0.09 0.17 -0.15 0.03 -0.59 -0.37
-0.32 0.48 0.47 0.58 0.48 0.76 0.39 -0.26 -0.25 -0.37 -0.75 -0.84 -0.52 0.36 0.23 -0.18 0.91 0.6 -0.28 -3.71 -1.11 -2.71 1.31 0.69 -0.8 -1.19 -0.42 0.02 -0.13 0.04 -0.65 -0.88
-0.4 -0.08 0.03 0.18 0.48 0.45 -0.14 -0.23 -0.15 -0.31 -0.47 -1.12 0.29 1.56 -0.55 1.25 0.41 -0.39 -0.79 -3.98 -3.72 -4.52 1.05 1.01 -2.38 -2.23 -0.05 0.42 -0.19 0.2 -0.28 0.06
-0.13 -0.08 0.02 0.19 0.32 0.21 0.41 0.18 0.35 0.13 0.28 0.09 -0.33 0.36 -0.36 -0.41 0.4 -0.34 -0.43 -2.1 -0.54 -1.89 0.37 0.2 0.3 -0.48 0.14 0.45 0.24 0.29 -0.19 -0.56
-0.23 0.13 0.05 -0.04 -0.15 -0.05 0.35 -0.16 0.22 0.26 0.1 -0.0 0.21 1.06 -1.84 0.63 -0.14 -0.13 -1.09 -4.57 -2.16 -5.04 1.25 1.37 -0.63 -2.73 -0.95 -0.58 0.09 0.22 0.35 0.54

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.