Heatmap: Cluster_193 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.61 0.8 0.77 0.67 0.6 0.53 0.06 0.01 0.05 0.28 0.17 0.18 -0.29 0.31 -0.47 -0.3 -0.37 -0.39 -0.17 -2.88 -0.11 -2.08 0.17 0.17 -0.87 -0.94 -0.35 -0.32 -0.3 0.09 -0.18 -0.1
0.76 0.78 0.44 0.62 0.54 0.62 0.47 0.37 0.46 0.65 0.39 0.52 0.13 -0.44 0.23 0.2 -0.38 -0.17 0.17 -3.11 -4.04 -2.74 -0.52 -0.62 -3.34 -0.61 -0.36 -0.3 -0.33 -0.1 -0.19 -0.38
0.56 0.88 0.69 0.64 0.5 0.73 0.37 0.35 0.46 0.31 0.29 0.29 0.17 0.21 -0.15 0.34 -0.56 -1.09 -0.05 -3.17 -1.64 -0.99 -0.06 -0.2 -2.56 -0.55 -0.28 -0.04 -0.53 -0.34 -0.58 -0.49
1.72 1.29 1.52 1.03 1.11 0.13 -0.05 0.79 0.72 0.69 1.18 1.72 -5.01 -1.71 -2.34 -4.27 -1.95 -0.66 -2.5 - -1.86 - -3.91 -2.75 -3.26 -0.47 -0.17 0.73 -1.61 -2.21 -1.77 -2.25
0.18 1.31 1.03 0.95 0.12 1.17 1.23 1.19 1.77 1.67 1.02 1.39 - -5.34 -4.94 - - -4.67 - 0.63 -0.37 -0.11 - - -2.19 -0.63 -1.34 -0.69 - - - -
0.38 0.52 0.56 0.45 0.37 0.54 0.39 0.29 0.4 0.36 0.27 0.15 0.01 -0.12 -0.04 0.0 -0.29 -0.38 -0.22 -2.29 -1.93 -3.81 -0.02 -0.1 -1.19 -0.36 0.13 0.32 -0.06 0.14 -0.16 -0.12
0.48 0.54 0.43 0.33 0.39 0.41 0.37 0.36 0.32 0.53 0.39 0.41 0.15 -0.31 -0.16 0.42 -0.46 -0.51 0.21 -0.92 -2.8 -1.93 -0.32 -0.33 -2.18 0.11 -0.09 0.05 -0.21 -0.09 -0.35 -0.21
0.7 0.58 0.34 0.32 0.25 0.28 0.35 0.2 0.37 0.32 0.23 0.42 -0.08 0.36 0.03 -0.14 -0.01 0.06 -0.32 -2.29 -1.5 -5.9 -0.19 -0.39 -1.6 -0.07 0.3 0.25 -0.16 -0.06 -0.3 -0.12
0.89 0.71 0.47 0.4 0.34 0.2 0.04 0.15 0.17 0.24 0.27 0.39 0.08 1.01 0.44 -0.03 -0.33 -0.55 -0.12 -4.01 -2.91 -3.68 -0.41 -0.43 -1.7 -0.19 0.08 0.13 -0.37 -0.27 -0.13 -0.01
0.64 0.57 0.68 0.46 0.56 0.47 0.17 0.09 0.33 0.34 0.3 0.13 -0.03 0.19 -0.92 -0.25 -0.18 -0.39 0.02 -1.31 -1.37 -2.08 0.36 0.34 -0.86 0.14 -0.1 0.22 -0.35 -0.2 -1.01 -1.11
1.14 0.89 0.82 0.55 0.8 0.79 0.12 0.34 0.55 0.71 0.57 0.49 -0.33 0.34 -0.5 0.21 -0.8 -0.71 -0.05 -7.8 -6.25 -6.83 -0.05 -0.07 -5.53 -1.57 -0.21 0.09 -0.84 -0.54 -0.6 -0.54
0.55 0.36 0.37 0.22 0.25 0.32 0.19 0.35 0.4 0.58 0.42 0.37 0.23 0.1 -0.16 0.14 -0.46 -0.64 0.08 -1.12 -0.99 -1.13 -0.16 0.06 -0.76 0.11 -0.42 -0.24 -0.3 -0.34 -0.33 -0.32
0.59 0.9 1.06 0.93 0.48 0.39 0.63 0.4 0.52 0.66 0.53 0.59 -0.55 0.12 -0.07 -0.21 -0.32 -0.52 -0.98 - - - -0.06 -0.19 - -0.77 -1.24 -1.08 0.02 0.11 0.2 -0.1
-0.05 0.61 0.74 0.61 0.44 0.32 0.67 0.36 0.7 0.64 0.61 0.34 0.21 0.05 -0.26 0.51 -0.58 -0.81 -0.16 -3.86 -4.37 -6.58 -0.56 -0.74 -4.13 0.2 -0.62 -0.58 -0.02 0.18 0.15 0.1
0.41 0.42 0.4 0.47 0.53 0.5 0.51 0.13 0.12 0.14 0.2 -0.0 -0.01 -0.47 -0.06 0.22 -0.27 -0.37 0.1 -1.78 -1.74 -1.8 -0.11 -0.15 -1.9 -0.06 0.45 0.44 -0.28 -0.17 0.01 0.03
0.49 0.61 0.5 0.34 0.25 0.61 0.21 0.3 0.14 0.29 0.11 0.01 0.1 -0.45 -0.02 0.2 -0.22 0.06 0.38 -1.01 -3.85 -3.62 -0.03 -0.08 -0.83 -0.3 0.2 0.24 -0.19 -0.03 -0.36 -0.31
0.35 0.56 0.58 0.54 0.49 0.49 0.17 0.19 0.15 0.19 0.2 0.05 -0.43 0.11 -0.17 -0.1 -0.36 -0.74 0.06 -1.74 -0.71 -1.93 -0.32 -0.33 -0.64 0.01 0.56 0.77 -0.52 -0.45 -0.19 -0.29
0.41 0.82 0.93 0.75 0.51 0.39 0.59 0.42 0.3 0.4 0.58 0.64 -0.95 -0.27 -0.82 -0.8 -0.02 -0.35 -0.77 -3.78 -2.05 -4.42 -0.43 -0.43 -1.56 -0.42 0.29 0.14 -0.48 -0.75 0.42 0.48
2.68 2.39 2.32 0.8 -1.17 -4.85 -1.29 -0.83 0.01 1.35 1.93 2.14 - -8.35 - - -5.59 -4.07 - - - - - -7.41 -5.73 -2.13 -4.49 - -7.32 -6.17 -7.29 -
1.12 1.16 0.9 0.62 0.78 0.45 -0.08 0.39 0.56 0.85 1.0 0.86 -0.09 -0.99 -1.57 -0.4 -0.37 0.17 -0.26 - -3.63 - -0.38 -0.31 - -0.51 -1.2 -0.94 -0.46 -0.83 -0.18 0.02
0.86 0.86 0.97 0.73 0.04 -0.1 0.13 0.26 0.24 0.51 0.37 0.48 -0.1 -0.66 -0.99 0.27 -0.72 -0.98 -0.49 -3.19 -0.81 -3.21 -0.28 0.06 -0.37 0.92 -0.41 -0.14 -0.6 -0.86 0.01 -0.14
0.7 0.73 0.84 0.88 0.73 0.72 0.65 0.01 0.3 0.52 0.67 0.64 -1.87 -0.88 0.81 -0.72 -0.33 -0.46 -0.59 -4.44 -3.62 -1.79 -0.09 -0.14 -5.29 -0.36 -0.86 -0.44 -0.1 0.54 -0.42 -0.85
0.97 1.04 0.88 0.53 0.56 -0.18 0.21 0.32 0.07 0.55 0.38 0.39 0.51 0.99 -1.07 0.5 -0.38 -1.0 -1.55 - -6.48 - 0.28 -0.15 -4.32 -0.07 -0.2 -0.84 0.03 -0.16 -0.56 -0.44
0.46 0.55 0.6 0.54 0.56 0.19 -0.13 -0.19 -0.02 0.24 -0.2 0.06 0.1 0.42 -0.37 0.09 -0.08 -0.15 0.14 -3.75 -6.23 - 0.37 0.33 -3.19 -0.3 -0.11 0.05 0.16 0.43 0.29 0.36
0.52 1.06 1.41 1.18 0.7 0.3 0.41 0.67 0.76 0.73 0.87 1.03 -1.15 -1.68 -1.73 -1.14 -0.56 -1.6 -0.23 -1.98 -2.54 -2.32 -1.5 -1.21 -1.54 1.02 -0.57 -0.27 -0.79 -0.81 -1.37 -1.42
1.12 0.44 -0.01 0.04 0.39 0.1 0.12 0.66 0.91 1.09 0.6 0.78 0.18 -0.28 -0.3 0.31 -0.8 -0.72 -0.06 -2.65 - - -0.84 -0.62 -5.21 0.12 0.44 -0.24 -0.5 -0.47 -0.2 0.03
1.26 0.96 0.99 0.75 0.62 0.38 -0.06 -0.06 0.19 0.47 0.84 0.77 0.02 -0.87 -0.41 0.39 -0.69 -0.97 -0.06 -4.93 -1.81 -3.78 -0.34 -0.29 -2.8 0.67 -0.53 -0.22 -0.77 -0.69 -1.13 -0.89
1.15 1.5 1.33 1.22 1.03 0.35 0.05 0.54 0.51 1.01 0.83 1.23 0.72 -5.31 -7.34 -0.68 -1.75 - -1.54 -2.98 -5.44 - -1.12 -2.22 -1.67 0.6 -0.0 -0.22 -1.47 -1.97 -1.13 -2.29
0.74 0.54 0.5 0.42 0.47 0.41 0.08 0.22 0.5 0.4 0.45 0.37 -0.43 -0.39 -0.28 -0.16 -0.08 -0.56 -0.09 -3.03 -1.77 -1.28 0.02 0.18 -0.42 -0.49 0.01 0.17 -0.04 0.2 -0.76 -0.49
0.73 0.34 0.22 0.13 0.24 0.36 0.3 0.28 0.54 0.58 0.44 0.4 -0.17 -0.23 0.52 0.36 -0.67 -0.28 0.32 -2.84 -1.63 -2.49 -0.27 -0.36 -2.24 -0.16 -0.16 -0.18 -0.08 -0.03 -0.03 0.11
1.02 1.51 0.96 1.63 1.06 0.97 0.55 0.58 1.68 1.57 1.64 1.44 -2.54 -2.71 -2.45 -1.38 -4.71 -5.43 -1.01 -0.19 -2.9 - - -4.76 - -3.47 -2.09 -3.59 -3.63 -4.45 -4.49 -6.89
2.38 1.75 0.98 0.67 0.91 0.36 0.21 0.68 0.57 0.95 1.36 1.83 -2.63 -0.28 -0.29 -2.6 -3.05 -5.2 -2.1 -5.67 - - -2.8 -5.05 -4.01 -0.83 -1.03 -1.04 -4.89 -4.23 -3.2 -3.78
1.63 1.35 1.15 0.62 0.35 0.07 0.22 0.26 0.3 1.0 0.96 1.18 -0.85 0.2 0.51 -1.01 -1.86 -4.59 -1.52 -1.98 -0.88 -2.64 -1.66 -1.95 -0.63 -0.01 -0.17 -0.58 -2.68 -2.67 -1.03 -0.7
1.04 0.87 0.8 0.53 0.42 0.34 0.43 0.12 0.45 0.64 0.81 0.73 -0.83 0.42 0.81 -0.22 0.01 0.01 -0.44 -3.58 -3.62 -4.32 -0.3 -0.5 -4.36 -0.82 -1.32 -1.42 -0.28 -0.14 -0.38 -0.58
0.91 0.96 0.64 0.75 0.91 0.54 0.14 0.21 0.44 0.3 0.53 0.09 0.17 0.37 -1.57 0.49 -0.32 -0.35 -1.6 - -4.34 - 0.27 0.23 -4.86 -0.59 -0.32 0.1 0.03 -0.04 -0.62 -0.95
0.81 0.7 0.91 0.68 0.0 -0.22 -0.23 0.7 0.62 0.53 0.48 0.34 -0.33 -0.85 -0.21 -0.52 -1.12 -1.13 -0.15 -1.89 -0.96 -5.02 -0.61 -0.42 -1.97 1.36 -0.41 -0.5 0.21 0.46 -0.79 -0.26
0.64 0.53 0.29 0.26 0.39 0.2 0.21 0.11 0.23 0.32 0.32 0.25 -0.53 -0.49 -0.47 -0.1 -0.17 -0.78 0.07 -3.54 -1.01 -1.0 -0.25 0.05 -1.03 0.36 0.66 0.92 -0.03 0.13 -0.79 -0.74
0.52 1.06 1.04 0.97 0.71 0.36 0.41 0.43 0.44 0.36 0.35 0.22 -0.44 -0.43 -1.3 0.45 -0.46 -0.93 -0.38 -3.07 -2.51 -5.39 -0.57 -0.64 -0.58 0.18 0.39 0.49 -0.43 -0.39 -1.31 -1.16
1.08 0.82 0.83 0.6 0.52 0.5 0.09 0.51 0.54 0.71 0.87 0.74 -0.26 -0.69 -3.04 0.05 -0.96 -0.35 0.31 -6.86 -4.71 -5.71 -0.39 -0.83 -5.16 0.5 -0.3 -0.51 -0.31 -0.48 -0.28 0.08
0.25 0.61 0.28 0.38 0.25 0.25 0.35 0.27 0.31 0.22 0.27 0.14 0.02 -0.42 0.35 0.42 -0.02 -0.04 -0.1 -1.3 -1.96 -2.58 0.01 -0.23 -1.93 -0.53 -0.06 -0.17 0.13 0.26 0.0 0.21
0.48 0.33 0.52 0.41 0.48 0.52 0.16 0.36 0.59 0.57 0.44 0.22 -0.0 -0.54 0.19 -0.19 -0.35 -0.35 -0.02 -1.72 -1.52 -1.4 -0.22 -0.16 -1.64 -0.44 -0.09 0.18 -0.31 -0.15 -0.03 -0.04
0.74 0.33 0.25 0.24 0.4 0.33 0.45 0.28 0.54 0.66 0.39 0.47 -0.45 -0.7 0.37 -0.3 -0.02 -0.27 0.18 -2.87 -2.74 -2.59 -0.06 -0.21 -1.7 -0.42 -0.02 -0.02 0.06 -0.06 0.07 0.1
0.45 0.57 -0.53 0.57 0.45 0.13 0.6 0.46 0.39 0.32 0.37 0.08 0.41 -0.49 0.02 0.31 -0.2 0.33 0.25 - - - -0.09 -0.27 - -0.11 0.15 0.04 0.25 0.3 -0.08 -0.14
0.61 0.82 0.93 0.62 0.89 0.77 0.3 0.38 0.28 0.32 0.42 0.26 -0.28 -0.01 -0.36 -0.15 -0.56 -0.19 -0.1 -2.96 -1.15 -4.0 0.12 0.05 -2.02 -0.66 -0.4 -0.35 -0.54 -0.51 -0.37 -0.27
0.38 1.09 1.25 1.05 0.75 0.17 0.74 0.85 1.41 0.87 1.28 1.04 -1.13 -1.81 -2.71 -1.07 -1.53 -2.14 -1.05 -2.2 -0.73 -1.94 -2.27 -1.76 0.55 0.83 -1.52 -2.24 -1.91 -1.52 -1.94 -2.6
0.4 0.32 0.22 0.31 0.31 0.4 0.28 0.31 0.26 0.37 0.29 0.1 -0.07 -0.24 0.17 0.1 -0.46 -0.05 0.21 -1.55 -1.1 -1.42 -0.1 -0.0 -1.27 -0.0 0.22 0.2 -0.36 -0.18 -0.14 -0.03
0.63 0.61 0.53 0.4 0.72 0.47 0.31 0.26 0.4 0.35 0.35 0.32 -0.22 0.09 0.67 0.04 -0.14 -0.04 0.2 -2.74 -2.04 -1.14 -0.3 -0.49 -3.58 -0.72 -0.25 -0.19 -0.25 -0.24 -0.52 -0.23
0.34 0.63 0.63 0.43 0.41 0.57 0.66 0.16 0.15 0.35 0.11 0.25 -0.08 0.29 0.24 0.19 -0.08 -0.43 -0.24 -2.67 -1.82 -1.08 -0.29 -0.15 -2.15 -0.24 0.11 0.2 -0.32 -0.13 -0.42 -0.45
0.73 0.98 0.88 0.82 0.56 -0.07 0.06 0.14 0.19 0.36 0.35 0.39 -0.89 -1.25 -2.27 -0.19 -0.87 -1.1 -0.33 -3.92 -1.29 -5.79 -0.02 0.14 -1.38 1.26 0.25 0.37 -0.33 -0.24 -0.25 0.02
0.51 0.46 0.51 0.42 0.34 0.39 0.16 0.18 0.37 0.53 0.43 0.36 0.03 0.09 -0.11 0.05 -0.42 -0.7 0.11 -1.34 -0.61 -1.23 -0.16 -0.27 -0.67 -0.08 -0.35 -0.42 -0.24 -0.28 -0.37 0.04

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.