Heatmap: Cluster_164 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
- - - - - - - - - - - - - 4.23 3.73 - - - - - - - - - - -11.0 - - - - - -
- - - - - - - 0.95 - - - - 1.5 - 2.96 - - 2.75 2.96 - - - - - - - - - 1.38 - - 1.27
-4.29 -2.97 -5.34 -4.74 -3.01 -3.64 -3.17 -3.11 -3.31 -3.18 -3.65 -3.88 0.5 2.95 1.33 1.73 -4.62 2.06 0.19 -4.99 -2.32 -0.81 -3.86 -1.49 -3.25 -1.54 0.36 -1.87 0.1 1.37 0.8 1.0
-1.85 -3.05 -1.27 -1.6 -0.54 -1.6 -3.07 -2.25 -1.38 -0.42 -1.05 -1.18 3.2 2.64 1.14 2.42 -3.74 -4.09 -1.07 - - - -3.23 -1.64 -4.01 -1.18 -1.66 -2.08 -1.35 -0.28 -1.38 -0.48
- - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - - -
-0.12 -0.26 -0.07 0.06 -0.04 0.04 0.12 0.2 0.16 0.23 0.08 0.14 0.61 1.36 0.83 -0.11 -0.23 -0.42 -0.35 -0.63 0.13 -0.51 0.12 0.22 -0.64 -0.31 -1.03 -1.16 -0.22 -0.21 -0.45 -0.25
- - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - -
-2.01 -1.73 -3.59 - -3.11 0.47 -0.95 -1.34 -1.97 -3.56 -2.33 -2.28 0.39 3.96 -0.29 0.4 - 0.34 -1.19 - - - - -3.13 - 0.45 1.38 - -1.25 0.14 0.5 -0.94
- - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - - -
-0.73 -1.12 -1.16 -1.23 -0.75 -0.67 -1.46 -0.7 -0.4 -0.12 -0.4 -0.61 1.54 2.89 -1.1 1.71 -1.08 -1.83 -0.62 0.94 -2.56 -1.55 -1.27 -0.52 -0.02 0.15 -0.37 -0.29 -0.72 -0.47 -1.62 -1.37
-0.57 -1.11 -0.96 -0.37 -0.03 -1.45 -1.1 -0.81 -0.51 -0.33 -0.06 -0.3 2.14 2.71 2.14 2.27 -4.86 -7.03 0.19 -6.21 - - -4.17 -3.37 -2.99 -1.09 -0.86 -0.84 -2.47 -1.58 -3.7 -3.02
-1.67 -1.77 -1.38 -0.8 -0.08 -0.75 -0.32 -0.81 -0.94 -0.76 -0.6 -1.04 1.13 2.72 2.81 1.78 -2.76 -7.23 -1.85 - - - -3.79 0.44 -0.68 -1.49 -0.44 0.01 -2.68 -0.02 -3.05 -2.27
-4.36 -3.79 -3.35 -2.72 -1.45 -2.14 -2.14 -2.46 -2.45 -3.42 -3.14 -3.6 0.06 3.8 3.36 0.88 -3.14 -4.82 -2.9 - - - -4.71 -0.4 -4.42 -3.45 -1.11 -1.09 -3.41 -0.65 -3.63 -2.84
- - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - 3.65 - - - - - - - - - - - - - - - 4.28 -
- - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - -
-2.09 -2.09 -1.83 -0.88 -1.47 -1.75 -1.07 -2.27 -1.58 -1.34 -1.31 -1.17 1.1 1.97 2.01 1.65 -0.12 2.03 0.6 - -4.69 - -3.73 -1.26 1.99 -0.62 -2.49 -0.94 -0.35 -0.6 -1.68 -1.25
- - - - - - - - - - - - - 2.77 4.65 - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - -1.78 3.19 4.26 - - 0.03 -4.12 - - - - - - 1.11 -2.11 - - - - -
- - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - - -
-5.29 -6.42 -6.53 -4.16 -1.2 -0.7 -0.18 -2.72 -3.54 -4.08 -6.15 -6.63 -3.71 2.89 2.92 -1.46 -2.33 1.0 -0.12 0.2 -0.24 -0.66 -2.55 -3.62 -1.54 -3.32 1.54 -0.73 -0.96 -0.49 0.29 0.85
- - - - - - - - 1.27 - - - - 3.06 - 1.76 - - 1.6 - - - - - - - - 3.89 - - - -
-0.83 -1.1 -0.64 -0.71 0.02 -0.78 -0.98 -1.38 0.41 -1.39 -0.66 -0.27 0.8 2.51 1.2 1.29 -0.67 -1.39 -1.94 -0.8 -1.56 - 1.21 0.24 -2.39 -0.66 0.64 0.72 -1.29 -0.48 -0.87 -1.0
- - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - 3.92 - - - - - - - - 4.08 - - - - - - - - -
- - - - - - - - - -1.43 - - 2.37 3.71 2.75 2.11 - - -1.23 - - - - - - - 0.04 - - -1.21 -1.22 -
- - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - 3.21 2.94 - - - - - - - - - 1.26 - - 2.77 - 0.22 0.3 0.27 1.2
1.11 -0.2 - - - 0.09 - - - - - - - 3.25 0.9 0.08 - 0.58 -0.25 - - - -0.09 - - - - 3.25 -0.2 0.82 - -
- -0.77 -0.0 0.31 - 0.27 0.19 1.36 - 1.09 2.74 0.28 0.53 -0.43 2.9 -0.47 -0.62 - 1.37 - - - - - - - - - - - -0.64 -
- - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - 4.12 3.87 - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - 2.9 1.75 - - - 1.49 - - - - - - 2.46 - 3.68 - - - -
- - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - 3.71 - - 3.55 - - - - 2.84 - - - - - - - - -
-1.32 -1.76 -1.54 -1.42 -1.77 -1.33 -1.67 -1.28 -1.04 -0.91 -1.06 -1.37 1.31 4.23 -0.57 0.79 -2.35 -2.58 -3.85 -3.07 -2.0 -7.23 -2.84 -3.26 -2.24 -0.52 -1.49 -1.19 -1.98 -1.78 -2.6 -2.51
-1.6 -1.33 -1.37 -0.8 -0.38 -0.35 -0.69 -1.05 -1.02 -0.91 -1.14 -1.65 1.41 2.27 -0.29 1.91 -0.91 -1.27 -0.39 -0.96 -1.58 -0.63 -0.68 -0.54 0.4 0.11 1.1 0.79 -0.57 -0.12 -0.76 -0.32

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.