Heatmap: Cluster_173 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
1.06 0.34 -0.06 -0.25 -0.1 -0.48 -0.08 0.23 0.49 0.67 0.73 1.03 0.27 -0.06 -0.92 0.33 -0.4 -0.34 -0.43 -5.48 -3.47 -7.87 0.02 0.02 -0.96 0.1 0.08 0.11 0.16 0.21 0.02 -0.03
-1.05 0.22 0.24 0.24 -0.42 -0.53 0.78 0.65 0.59 0.86 0.69 0.7 1.13 -0.02 -0.93 -0.69 -1.1 -0.44 -0.17 -9.7 - - -0.47 -0.38 -6.37 -0.03 -1.98 -3.0 1.03 0.98 0.79 0.75
1.65 1.08 0.48 0.27 -0.02 0.13 0.43 0.34 0.42 0.62 0.83 1.16 -0.83 -1.02 1.03 -0.91 0.41 -0.4 -1.24 -3.79 -5.09 -2.02 -1.41 -2.19 -3.28 -1.46 -0.74 -0.65 0.42 0.5 -0.83 -1.16
1.08 0.42 0.39 0.53 0.46 0.04 0.49 0.42 0.53 0.68 0.76 0.76 -0.31 -0.4 -2.24 0.53 -0.6 -0.33 -0.43 - -5.52 - -0.76 -0.99 -7.46 0.8 0.0 -0.09 0.39 0.53 -0.94 -0.45
0.51 0.12 0.05 -0.11 -0.37 -0.6 0.11 0.66 0.87 1.04 0.97 0.95 0.1 -0.26 -1.41 -0.16 -0.57 -1.07 -0.59 -3.99 -2.8 -8.69 0.14 0.09 -1.91 0.18 -0.0 -0.5 -0.03 -0.08 0.55 0.84
1.18 1.0 1.01 0.72 0.25 -0.07 0.52 0.73 1.09 1.24 1.26 1.36 0.47 -0.53 -1.33 0.15 -2.7 -3.27 -1.45 -3.47 -2.12 -2.0 -3.22 -1.81 -3.45 0.27 -1.24 -1.42 -1.09 -0.75 -0.96 -0.86
1.26 0.82 0.82 0.61 0.33 0.21 0.51 0.28 0.57 0.85 0.98 1.37 -0.86 -0.85 -0.12 -0.73 -0.58 -0.9 -0.85 -4.82 -10.37 - -0.05 -0.04 -6.46 -0.27 -0.96 -0.78 -0.19 -0.0 -0.46 -0.48
1.27 0.66 0.39 0.25 0.29 0.17 0.23 0.22 0.49 0.61 0.6 0.6 -0.97 -1.46 -0.77 -0.39 0.05 -0.16 0.2 -1.74 -3.25 -3.14 0.15 0.34 -3.91 -0.48 -0.3 -0.15 0.26 0.39 -0.31 -0.25
0.52 0.16 0.22 0.26 0.24 0.2 0.26 0.64 0.72 0.91 0.86 0.82 0.51 -0.5 -1.1 -0.14 -0.84 -0.27 -0.81 -3.76 -1.84 -3.58 -0.43 -0.48 -1.49 0.8 -0.27 -0.51 -0.52 -0.49 0.0 0.58
1.07 0.55 0.37 0.25 -0.05 -0.32 -0.0 0.11 0.43 0.63 0.76 0.92 0.6 -0.43 -0.09 0.2 -0.03 -0.44 -0.43 -4.25 -3.29 -2.79 -1.5 -1.22 -1.89 0.6 -0.26 -0.06 0.26 0.41 -0.26 -0.33
0.38 0.38 0.12 0.2 -0.06 0.62 0.87 0.55 0.97 1.13 1.09 1.01 -2.88 -1.48 -1.03 -1.3 0.08 0.97 -0.21 - - -3.78 -0.7 -1.09 -4.39 -0.74 -0.75 -1.28 0.49 0.4 0.2 0.15
1.04 0.77 0.55 0.62 0.31 0.11 0.24 0.22 0.86 1.38 1.02 1.18 0.91 -0.32 -0.64 -0.03 -1.28 -1.63 -1.07 -3.03 -0.74 - -0.94 -0.52 -2.62 0.51 -1.7 -2.14 -1.08 -1.07 -0.44 -0.75
1.1 0.5 -0.07 0.09 -0.27 -0.41 -0.11 0.18 0.38 0.9 0.97 1.26 0.27 -0.1 -1.25 0.69 -1.19 -0.94 0.36 -3.8 -1.28 -3.94 -0.6 -0.59 -2.47 0.04 -0.75 -0.8 -0.02 0.12 0.23 0.44
0.45 0.29 0.34 0.28 0.16 0.15 0.02 -0.01 0.22 0.48 0.58 0.41 0.56 -0.51 -1.07 0.45 0.01 0.44 -0.13 -2.09 0.12 -5.93 0.11 0.3 0.21 0.39 -1.07 -0.87 -0.3 -0.39 -0.7 -0.54
0.42 0.58 0.56 0.34 0.1 0.12 0.47 0.43 0.49 0.69 0.72 0.9 0.4 0.1 -1.32 0.35 -0.0 -0.05 0.67 -3.39 -4.85 -4.36 -0.13 -0.67 -5.71 0.03 -0.93 -0.86 0.26 0.38 -0.97 -0.9
0.2 0.12 0.34 0.22 0.12 -0.12 0.39 0.68 0.91 1.06 0.82 0.58 1.08 0.58 -3.79 0.5 -0.26 -0.09 -1.24 -6.94 -3.86 -8.21 -1.11 -0.64 -4.0 -0.59 -1.52 -2.25 -0.08 0.01 0.68 0.92
-0.06 0.36 0.69 0.65 0.66 0.41 0.55 0.53 0.42 0.49 0.3 0.13 0.55 0.75 -3.82 -0.25 0.08 -0.05 -0.27 -2.46 -1.03 -5.18 -0.71 -0.83 -1.04 -0.7 -0.97 -1.29 -0.34 -0.42 0.53 0.93
1.43 0.72 0.57 0.36 0.32 0.45 0.38 0.14 0.6 0.58 0.77 0.91 -0.42 0.04 0.19 -0.04 -0.35 -0.12 -0.34 -4.24 -3.26 -2.52 -0.28 -0.03 -6.27 -1.54 -1.5 -1.17 -0.01 0.26 -0.45 -0.55
1.23 0.66 0.58 0.53 0.58 0.24 -0.07 0.46 0.25 0.29 0.4 0.36 -0.65 -0.45 -0.59 -0.27 -0.65 -0.62 -0.22 -3.47 -2.05 -3.37 0.25 0.36 -1.17 0.45 0.3 0.51 -0.04 -0.45 -0.9 -1.05
0.88 0.44 0.29 0.1 0.07 0.05 0.09 0.31 0.5 0.71 0.65 0.83 0.03 -0.09 -0.77 0.07 -0.61 -0.61 -0.01 -1.35 -1.38 -3.16 -0.33 -0.28 -1.34 0.08 -0.52 -0.38 -0.05 0.12 0.17 0.29
-0.2 -0.16 -0.03 -0.31 -1.24 -2.0 0.87 1.01 1.1 1.46 1.22 1.29 -0.59 -0.75 -1.06 0.61 -1.16 0.6 -1.29 -3.91 -1.69 -5.69 -1.78 -2.2 -6.82 -1.44 -2.74 -2.83 0.84 0.34 0.98 1.02
-0.31 0.49 0.45 0.42 -0.13 -0.69 0.52 0.45 0.47 0.56 0.48 0.72 -0.83 0.29 -1.0 -0.29 -1.25 -0.8 -0.42 -2.16 -0.7 -2.42 -1.28 -1.26 -1.31 0.54 -0.2 -1.14 0.2 0.17 1.18 1.27
1.86 1.4 0.44 0.13 0.69 0.81 0.63 0.35 0.34 0.55 0.79 1.29 -3.13 -0.91 -1.29 -2.09 -1.32 -1.45 -2.54 - - - -1.74 -2.24 -1.71 -0.68 1.42 0.72 -0.76 -1.27 -0.25 -1.5
0.93 0.33 0.14 0.07 0.15 0.13 0.34 0.6 0.46 0.62 0.65 0.64 -0.26 -0.02 -0.17 -0.47 -0.5 -0.43 -0.01 -6.38 -3.41 -5.24 -0.34 -0.18 -1.18 0.19 0.19 0.05 -0.16 -0.24 0.37 0.25
0.37 0.75 0.59 0.23 -0.37 -0.62 0.39 0.27 0.73 1.05 1.06 1.2 1.02 0.32 -0.63 -0.32 -0.37 -0.56 -1.71 -5.08 -2.38 -4.53 -0.86 -1.13 -2.23 -0.55 -1.61 -1.77 -0.13 -0.22 0.74 0.68
1.08 0.7 0.49 0.49 0.36 0.45 0.27 0.15 0.42 0.59 0.49 0.56 -0.55 -0.52 -0.09 -0.33 -0.16 -0.46 0.38 -3.81 -2.85 -3.3 -0.04 -0.0 -3.46 -0.68 -0.31 -0.03 0.01 0.13 -0.03 -0.19
0.47 0.26 0.33 0.21 0.11 -0.08 0.38 0.51 0.89 1.06 1.05 0.98 0.29 0.26 -0.15 -0.1 -0.17 -0.55 -0.59 -2.88 -5.1 -2.56 0.01 -0.35 -2.29 -0.86 -0.46 -0.21 -0.29 -0.27 -0.39 -0.15
0.19 -0.24 -0.21 -0.19 -0.26 -0.61 0.86 0.45 0.67 0.8 0.95 0.79 -0.33 -0.15 -1.56 -0.17 -1.13 -0.9 0.08 -4.52 -2.52 -9.1 -1.18 -0.91 -2.43 1.01 0.3 0.19 0.13 0.17 0.97 0.76
1.16 0.57 0.2 0.02 -0.05 -0.1 0.06 0.33 0.59 0.78 0.9 1.04 -1.43 -0.55 -0.01 -0.71 -0.31 -0.54 -0.14 -0.88 -1.03 -1.7 0.07 0.22 -2.87 -0.46 -0.84 -0.68 0.28 0.31 -0.36 -0.2
-0.46 -0.27 -0.18 -0.06 -0.44 -0.18 0.51 0.82 0.94 1.02 0.88 0.76 0.22 0.01 -0.23 -0.1 -0.68 -0.33 -0.4 -5.22 -5.67 - -0.65 -0.68 -2.54 0.48 -0.54 -0.73 0.49 0.29 0.68 0.84
-1.01 -0.34 0.16 0.43 0.04 -0.36 0.98 0.84 0.7 0.91 0.86 0.79 0.2 -0.66 -0.27 -0.09 -1.01 -1.08 -0.32 -3.63 -7.97 -8.09 -0.58 -0.58 -4.53 1.12 -0.98 -1.01 0.14 0.34 0.62 0.8
1.5 1.27 0.97 0.76 -1.52 0.87 0.27 -0.2 0.67 1.35 0.89 1.1 1.91 1.04 -4.07 0.41 -1.46 -2.71 -3.95 - -1.32 - -0.9 -1.79 -2.16 -3.7 -1.69 -0.95 -2.07 -2.92 -3.36 -3.05
0.55 -0.01 -0.04 -0.02 -0.12 -0.17 0.11 0.52 0.6 0.99 0.92 0.83 0.78 0.94 -1.01 0.61 -0.77 -0.75 -0.34 -8.86 -3.66 -1.39 -0.39 -0.92 -1.77 -0.64 -0.79 -0.36 0.16 0.06 0.03 0.29
0.99 0.45 0.31 0.35 0.07 0.2 0.44 0.44 0.47 0.98 0.97 1.03 -0.47 -0.84 -0.06 -0.49 -0.8 -1.51 -0.38 -6.57 -3.2 -4.9 -0.51 -0.33 -2.39 0.58 0.23 0.13 -0.21 0.09 -0.31 -0.16
1.39 1.09 0.38 0.54 0.39 0.23 0.13 0.43 0.96 1.01 1.43 1.37 -0.55 -0.62 -2.1 0.06 -1.65 -1.46 -0.13 - - - -1.31 -1.31 - 0.53 -0.72 -0.65 -0.91 -0.6 -0.66 -0.25
1.31 0.57 -0.15 0.67 1.0 1.19 1.03 0.6 -0.48 1.22 -0.3 0.91 2.33 -0.38 0.81 1.6 - -2.43 -1.68 - - - - - -0.41 -2.81 - - - - - -
1.58 1.1 0.39 0.19 -0.08 -0.25 -0.32 -0.06 0.07 0.37 0.51 0.83 -2.01 -1.77 -2.78 -0.98 0.12 -0.14 0.46 -0.17 -3.36 -5.14 -0.26 -0.82 -1.97 0.38 0.12 0.16 0.28 0.52 0.2 -0.31
1.34 0.43 0.31 0.1 0.16 0.05 0.01 0.08 0.17 0.38 0.46 0.65 -0.04 -0.27 -0.66 0.27 -0.26 -0.35 0.68 -10.41 -6.13 -8.01 -0.32 -0.25 -5.84 0.77 -0.18 0.11 0.18 0.31 -0.31 -0.27
0.86 0.32 0.08 -0.11 -0.08 0.06 -0.18 0.05 0.11 0.24 0.28 0.59 -0.0 -0.45 -0.29 0.32 -0.46 -0.56 0.38 -2.77 -0.57 -0.72 -0.34 -0.3 -0.14 0.63 0.09 0.15 0.33 0.43 -0.85 -0.44
1.43 0.97 0.61 0.51 0.4 0.36 0.17 -0.03 0.36 0.6 0.46 0.74 -0.19 -0.12 -0.76 -0.22 -0.35 -0.74 -0.26 -3.57 -4.79 -2.68 -0.57 -0.63 -2.53 -0.56 0.26 0.24 -0.16 -0.08 -0.14 -0.29
0.25 0.4 0.58 0.3 -0.3 -0.24 0.62 0.65 0.98 1.15 1.26 1.11 -0.61 -0.04 -0.11 -0.68 0.12 0.26 -0.82 -7.47 -3.54 -5.13 -1.11 -1.13 -4.47 -0.74 -2.4 -2.45 0.52 0.53 0.12 0.29
0.7 0.2 0.2 0.08 0.25 0.19 0.3 0.17 0.19 0.21 -0.08 0.05 0.17 -0.7 -0.09 0.46 -0.16 -0.73 0.25 -3.28 -1.43 -3.61 -0.19 -0.13 -0.63 0.4 0.48 0.86 0.29 0.36 -0.51 -0.79
0.44 0.39 0.23 0.11 -0.06 0.08 0.15 0.25 0.59 0.53 0.47 0.17 1.06 0.32 -5.41 0.38 -0.03 -0.26 -0.74 -3.23 0.38 -5.23 0.5 0.21 -1.58 0.57 -1.09 -0.83 -0.09 -0.09 -0.57 -0.29
0.98 0.23 0.39 0.07 0.37 0.05 0.04 0.26 0.71 0.78 0.87 0.78 0.57 -0.32 -0.47 0.62 0.1 -0.18 0.17 -3.64 -1.57 -3.68 -0.51 -0.3 -2.78 -0.11 -1.3 -1.17 0.17 0.2 -0.71 -0.75
0.08 0.21 0.57 0.51 0.08 -0.32 0.76 0.46 0.7 1.04 0.89 1.09 0.67 -0.01 -0.81 1.09 -0.6 -1.95 -0.82 -2.38 -2.2 -2.66 -0.25 -0.01 -2.82 0.11 -2.12 -2.01 -0.33 -0.51 -0.28 0.12
-0.69 0.09 0.53 0.53 -0.87 -0.73 0.32 0.53 0.76 1.07 0.71 0.79 0.87 0.08 -0.09 0.33 -1.07 -0.85 -0.35 -6.06 -3.18 -5.94 -0.9 -1.08 -2.91 0.56 -1.39 -1.5 0.06 -0.12 0.92 1.13
0.73 0.43 0.28 0.26 0.25 0.22 0.06 0.1 0.26 0.47 0.43 0.5 0.31 0.17 0.06 0.41 -0.25 -0.05 0.25 -1.76 -1.88 -0.68 -0.32 -0.17 -2.57 -0.6 -1.17 -0.91 0.21 0.37 -0.08 -0.02
-0.78 0.12 0.7 0.6 -0.09 -0.52 1.09 1.08 0.94 1.14 0.91 0.87 0.88 -0.55 -1.91 0.73 -1.48 -1.53 -0.69 -5.92 -3.23 -5.01 -0.94 -0.76 -3.0 1.09 -0.85 -1.23 -0.42 -0.41 -0.42 -0.07
0.82 0.32 0.36 0.34 0.31 0.4 0.31 0.51 0.46 0.74 0.44 0.63 0.23 -0.72 -1.16 0.29 -0.02 0.05 0.13 -3.09 -2.11 -3.6 -0.54 -0.84 -1.85 -0.54 -0.11 0.09 0.39 0.42 -0.47 -0.49
1.03 0.27 0.18 0.15 -0.04 0.05 -0.07 0.21 0.3 0.71 0.64 0.89 0.61 0.01 -1.14 0.57 -0.08 -1.08 0.09 -5.14 -2.78 -4.13 -0.54 -0.69 -2.65 -0.21 -0.23 0.05 0.63 0.61 -0.19 -0.37
0.08 0.51 0.32 0.31 -0.41 -0.56 0.31 0.27 0.62 1.01 0.94 1.14 0.32 0.2 -0.31 0.62 -0.5 0.21 -0.31 -4.49 -1.56 -3.9 -0.01 -0.25 -2.7 -0.41 -0.98 -1.16 -0.35 -0.65 0.16 0.48
1.0 0.62 0.3 0.23 0.07 -0.17 0.04 0.26 0.44 0.54 0.66 1.02 -1.17 -0.16 -0.18 -0.58 -0.35 -0.67 -0.21 -3.12 -2.27 -2.63 -0.14 0.0 -2.93 -0.2 0.05 0.13 -0.16 -0.11 0.67 0.44
1.1 0.6 0.15 0.2 0.08 0.11 0.63 0.71 0.81 0.91 0.83 1.09 -0.73 -0.1 -0.47 -0.15 -0.57 -0.78 -0.58 - -3.31 -5.29 -0.75 -1.12 -2.78 -0.03 0.18 0.31 -0.18 -0.09 -0.25 -0.35
1.13 0.89 0.62 0.48 0.27 0.06 0.31 0.23 0.52 0.83 0.87 1.18 0.17 -0.87 -1.26 -0.04 -0.66 -0.85 -0.39 -1.26 -1.21 -3.19 -0.09 -0.11 -1.68 -0.4 -0.92 -0.86 -0.29 -0.34 -0.47 -0.43
1.29 -0.1 -0.13 -0.56 -0.24 -0.22 0.1 0.28 0.44 0.4 0.74 0.97 -0.34 -0.33 -0.38 0.03 -0.55 0.01 -0.14 -5.74 - - -0.18 -0.39 -5.34 -0.62 -0.06 0.3 0.99 1.28 -0.03 -0.28
1.08 0.58 0.89 0.5 0.15 -0.13 0.45 0.34 1.03 1.08 1.02 0.97 1.33 -0.89 -2.7 0.49 -0.62 -1.34 -1.9 - -1.67 -7.09 -0.84 -0.04 -2.64 -1.38 -1.26 -1.37 -0.26 -0.17 -0.32 -0.58

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.