Heatmap: Cluster_190 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.33 -0.82 -0.72 -0.78 -0.5 -0.75 -0.67 -0.3 0.07 -0.06 0.11 0.01 0.57 1.1 -0.24 1.13 -1.17 -1.12 0.75 -0.61 0.84 -1.57 -1.29 -0.91 0.64 0.54 -0.19 -0.78 -0.31 -0.35 0.78 0.91
-0.53 -0.47 -0.41 -0.32 0.01 0.23 -0.45 -0.14 -0.99 -0.81 -1.02 -1.08 -0.21 1.26 -0.31 0.42 -0.0 0.0 0.51 -0.67 0.81 -0.61 0.26 0.42 0.15 0.3 1.0 0.72 -0.03 -0.06 -1.32 -1.2
- 1.31 - - -2.19 - - - 1.25 - - - 3.05 2.54 2.39 - -1.42 -0.26 - - - - - -2.63 2.59 - - - - -2.51 - -
-0.23 -0.14 -0.41 -0.36 -0.07 -0.14 -0.13 -0.09 0.06 0.15 -0.1 -0.23 0.04 0.8 0.07 0.84 -0.95 -0.21 0.64 -1.62 0.52 0.72 -0.26 -0.13 0.47 -0.46 -0.29 -0.37 -0.22 -0.42 0.03 0.02
-2.27 - - -2.28 - - -2.06 1.15 -0.78 0.48 -0.34 -2.11 -0.53 0.98 1.58 1.7 - - 0.97 - - - -2.68 -0.5 2.35 2.79 0.2 -1.04 -2.58 -2.47 -1.27 -
-1.0 -0.26 0.01 -0.3 -0.24 -0.43 -0.48 -0.82 -1.13 -0.68 -0.97 -1.19 1.72 -0.33 -3.67 1.13 -0.22 -0.21 0.51 -1.52 1.93 -2.57 0.22 0.43 2.09 -1.74 -1.16 -0.9 -0.87 -0.83 -1.26 -0.96
-0.1 -0.35 -0.77 -0.48 -0.55 -0.67 -0.64 0.01 0.04 0.17 0.04 0.3 0.2 1.12 0.15 0.59 -0.1 -0.36 0.54 -1.48 -1.32 -3.58 -0.28 -0.02 -0.38 1.02 0.09 0.0 0.36 0.35 0.23 0.34
-0.01 -0.27 -0.35 -0.27 -0.31 -0.29 -0.51 -0.26 -0.46 -0.6 -0.51 -0.28 -0.32 1.22 -0.12 0.31 -0.76 0.29 0.72 -0.3 0.51 -3.0 -0.29 0.09 0.17 0.84 0.53 0.07 -0.23 -0.07 -0.02 0.4
-0.42 -0.71 -0.51 -0.42 -0.34 -0.3 -0.42 0.01 -0.19 -0.12 -0.34 -0.49 0.39 0.31 0.29 0.42 -0.52 -0.37 0.28 -1.49 0.76 -0.33 -0.07 0.17 0.14 1.21 0.27 0.14 -0.36 -0.34 0.23 0.45
-0.36 -0.78 -1.25 -0.46 -0.37 -0.31 -0.72 0.07 -0.37 -0.42 -0.55 -0.55 -1.31 1.76 -1.74 0.12 -0.69 -0.32 1.49 -6.78 -1.2 - -0.64 -0.23 0.76 1.27 1.19 0.98 0.21 -0.07 -0.28 -0.47
0.03 -0.93 -1.17 -1.23 -0.97 -1.0 -0.43 -0.2 -0.54 -0.21 -0.7 -0.88 -1.13 -0.18 -1.84 -0.57 -0.89 -0.66 0.81 0.75 1.95 -1.02 -2.07 -2.04 0.72 1.85 0.88 0.55 -0.35 -0.32 0.46 0.02
-0.4 -0.35 -0.3 -0.23 -0.59 -0.34 -0.35 0.0 -0.07 0.14 -0.04 -0.06 0.1 0.67 0.29 0.31 -0.63 0.11 0.2 -0.67 0.88 0.27 0.12 0.23 0.29 0.34 -0.22 -0.39 -0.21 -0.26 -0.28 0.02
-0.08 -0.36 -0.64 -0.68 -0.25 -0.44 -0.3 -0.63 -0.3 -0.25 -0.21 -0.41 -0.97 1.33 -0.98 0.13 -1.7 -0.02 0.29 -1.54 1.0 -2.7 -1.28 -0.96 -0.08 -0.09 0.55 -0.42 0.04 1.05 1.57 1.0
0.14 -0.36 -0.5 -0.47 -0.63 -0.51 -0.56 -0.41 -0.03 0.11 -0.07 -0.06 0.15 0.97 -0.37 0.56 -0.8 -0.77 0.86 -1.1 -0.23 -0.03 -0.31 0.03 -0.07 0.8 0.22 -0.01 -0.07 0.14 0.42 0.35
-0.09 -0.07 -0.14 0.01 -0.08 -0.12 -0.27 -0.07 -0.17 -0.24 -0.34 -0.31 0.73 0.92 0.05 0.83 -0.38 -0.66 0.53 -2.07 0.79 -0.95 0.09 0.2 1.1 -0.66 -0.87 -0.97 -0.04 -0.09 -0.34 -0.35
-0.15 -0.26 -0.39 -0.16 -0.2 -0.43 -0.64 -0.6 -0.24 -0.31 -0.08 -0.47 -0.01 1.44 0.03 0.82 -0.21 -0.29 0.26 -4.16 1.21 -3.37 -0.05 -0.02 0.83 -0.33 -1.08 -1.18 0.34 0.33 0.37 0.37
- - - - - - - - -0.53 - - - 3.12 3.02 0.28 -2.05 -2.88 -2.3 -1.03 - 0.53 - -3.08 -3.0 3.23 -1.66 -1.36 - - -1.97 -2.3 -
-0.32 -0.02 -0.09 0.04 -0.02 -0.01 0.04 0.16 0.14 0.11 -0.13 -0.17 0.32 0.75 0.23 0.62 -0.33 -0.5 0.41 -0.62 0.13 -0.83 -0.12 0.0 0.81 -0.18 -0.33 -0.2 -0.33 -0.19 -0.68 -0.25
-0.04 -0.31 -0.21 -0.19 -0.3 -0.38 -0.27 0.07 0.21 0.21 0.29 0.23 0.64 1.8 0.27 -0.01 -0.28 -0.29 -0.15 -2.3 -0.18 -3.72 -0.51 -0.49 1.01 -0.41 -0.33 -0.6 -0.02 -0.02 -0.26 -0.11
0.0 -0.25 -0.1 -0.26 -0.03 0.05 -0.35 -0.17 0.07 0.08 0.12 0.03 -1.66 -1.01 -1.19 -0.2 -0.68 0.26 1.64 -2.22 1.08 -2.45 -0.9 -0.61 1.04 0.42 0.79 -0.2 -0.22 -0.35 -0.15 0.27
0.81 0.53 0.02 -0.38 0.04 -0.72 -0.51 0.4 -0.63 0.42 0.37 0.32 -0.9 -0.44 -2.57 0.01 -2.51 -1.76 1.04 -3.17 1.31 - -1.49 -1.37 1.1 0.73 1.09 0.69 -0.59 -0.71 -0.04 -0.41
-0.38 -0.39 -0.72 -0.59 -0.65 -0.48 -0.68 -0.49 -0.49 -0.46 -0.65 -0.55 0.61 0.71 -0.14 0.68 -0.29 0.11 0.88 -1.88 1.02 -2.05 0.03 0.13 1.5 -0.75 -1.03 -1.16 0.18 0.13 0.58 0.68
0.36 -0.2 -0.37 -0.27 -0.34 -0.18 -0.11 0.44 0.14 0.15 0.11 0.16 -5.03 -0.02 -3.92 -2.48 -1.22 -0.68 1.21 -2.66 1.06 -7.72 -1.66 -1.67 1.53 1.47 0.88 0.53 -0.54 -0.76 -0.01 0.22
-0.24 -0.91 -0.95 -0.91 -1.16 -0.97 -0.67 0.25 -0.08 0.13 0.08 0.16 0.55 1.7 -1.8 0.96 -1.25 -1.38 0.5 -0.3 0.01 -3.83 -0.78 -0.35 0.39 0.98 -0.08 -0.39 0.16 -0.1 0.72 0.54
-3.8 - - -3.29 - - - -2.89 - -3.64 -2.9 - 1.61 2.57 -0.49 0.49 -0.29 -0.05 0.16 -0.52 1.7 -2.48 0.05 0.11 2.2 0.76 -1.35 0.01 0.32 0.15 -1.02 -0.45
-0.48 -1.74 -2.75 -2.22 -2.83 -1.73 -1.53 -0.9 -1.08 -1.1 -1.11 -1.19 -0.67 -0.83 -2.71 -0.09 -1.25 -0.79 1.53 -0.26 1.61 0.22 -1.74 -1.86 -0.19 2.29 1.16 1.1 0.25 0.19 0.68 0.66
-0.63 -0.75 -1.15 -0.55 -0.33 -0.38 -0.3 0.17 0.35 0.2 -0.17 -0.06 0.27 -0.65 0.59 0.55 -0.66 -0.71 0.38 -0.63 0.73 -1.1 0.08 0.44 0.2 1.25 0.25 0.31 -0.18 0.31 -0.55 -0.88
-0.51 -1.78 -0.26 -0.01 -2.18 -1.32 0.07 -0.31 -2.6 -4.24 -2.13 -0.42 0.77 1.94 -1.74 0.26 -1.73 0.09 1.34 - 0.68 -0.53 -0.83 -1.64 1.48 1.34 1.49 1.29 -2.02 -1.76 -2.68 -2.82
-2.62 -1.89 0.27 -0.95 - -2.53 - -2.35 -2.52 -0.53 0.15 -0.89 -3.1 1.69 1.91 -3.14 -3.22 -3.6 0.12 - 0.53 - - -3.2 1.93 2.58 2.09 1.31 - -3.21 - -1.82
-5.95 -3.78 -4.6 -4.82 -4.06 -4.92 -4.55 -4.62 -4.73 -4.01 -7.68 -5.33 1.39 1.88 -0.34 1.08 0.13 -0.46 0.22 -0.16 1.48 -0.48 0.17 -0.1 2.42 0.0 0.19 0.24 0.39 0.27 0.03 -0.59
0.66 -1.13 -0.2 -0.84 -2.05 -0.29 -0.86 -0.34 0.76 -0.55 0.25 -0.64 -2.41 -5.27 -0.22 -2.91 -0.23 -1.61 0.86 -1.67 1.57 - -1.01 -1.78 -0.81 1.6 1.04 2.22 -0.36 -0.01 -0.48 -0.24
-0.73 -0.77 -1.11 -1.03 -0.32 -1.87 0.01 -0.36 -0.45 0.64 -0.2 0.17 0.26 1.05 0.12 0.51 -0.69 -0.27 0.53 -3.38 0.66 -2.26 -0.29 0.0 -2.04 0.7 0.42 0.03 0.11 0.1 1.16 0.77
-0.8 -0.97 0.02 -0.31 -1.03 -0.39 -0.3 -0.1 -0.7 0.44 0.11 0.18 0.38 0.87 0.77 0.07 -1.1 1.03 0.29 -4.46 1.67 - -0.52 0.55 -1.59 0.58 -0.14 0.76 -0.5 -0.8 -1.19 -0.4
-0.64 -0.38 -1.54 -0.94 -0.26 -1.37 -1.83 -0.77 -1.14 -0.99 -0.47 -0.56 -0.71 2.81 -0.31 0.49 -1.04 -1.88 -0.82 1.9 0.99 0.86 -1.1 -1.65 1.04 -0.58 -1.14 -1.03 -1.46 -1.42 -0.64 -0.43
-4.17 -2.06 - - -1.17 - - - - -4.19 - - -2.23 -2.67 -1.25 -1.14 -3.17 0.36 -0.68 1.45 2.52 0.08 -3.1 -1.83 -3.31 2.79 2.22 2.49 -3.04 -2.92 -1.75 -2.61
-0.42 -0.89 -1.53 -1.74 -2.09 -2.34 -1.5 -0.84 -0.53 -0.16 -0.38 0.08 -0.08 1.23 -2.37 0.92 -1.95 0.85 0.9 -0.01 0.71 -1.91 -0.43 0.23 -0.87 0.99 -0.6 -1.35 0.19 0.83 1.13 1.33
-0.6 -0.4 -0.58 -0.5 -0.46 -0.42 -0.69 -0.42 -0.6 -0.62 -0.71 -0.69 0.58 1.27 -0.59 0.71 -0.37 0.02 0.26 -0.48 0.89 -0.33 0.21 0.17 0.79 0.59 0.43 0.34 -0.41 -0.35 -0.37 -0.25
-1.05 -0.77 -1.76 -2.44 -4.7 -1.59 -0.95 -0.63 -2.45 -1.53 -1.54 -1.21 -2.59 1.4 -5.82 -0.61 -1.94 -1.86 2.2 -1.23 2.09 -1.82 -2.89 -2.46 0.92 2.4 1.49 0.02 -0.53 -1.21 -0.22 -0.36
-0.33 -0.74 -1.77 -1.42 -2.56 -1.47 -1.03 -1.16 -0.94 -0.91 -1.06 -1.1 1.56 2.42 -1.28 0.94 -1.16 -2.05 1.66 -1.02 1.24 -2.91 -1.86 -2.22 -0.82 1.55 0.42 -0.98 -0.42 -1.12 0.64 -1.27
0.01 -0.42 -0.66 -0.83 -0.85 -0.91 -0.49 -0.31 0.1 -0.0 0.04 0.05 0.21 0.58 -0.53 0.53 -1.7 -0.34 0.21 0.38 0.44 -0.94 -0.69 0.14 -0.53 1.15 -0.49 -1.17 -0.16 0.06 0.86 1.35
-1.4 -1.63 -1.65 -1.62 -1.79 -1.54 -1.68 -1.23 -1.41 -1.51 -1.26 -1.33 -0.11 1.99 0.45 0.54 -1.17 -0.29 0.77 1.01 1.42 0.75 -0.71 -0.0 0.78 0.71 -0.46 -1.41 -0.31 -0.4 0.72 0.48
-0.36 0.21 0.21 0.08 0.19 0.03 -0.15 -0.05 0.08 -0.05 -0.0 -0.06 -1.1 1.31 0.05 0.18 -0.76 -1.21 1.1 -2.83 -2.76 -2.61 -0.19 -0.31 -0.19 0.27 0.74 0.49 0.06 0.09 0.16 0.08
-0.81 -0.84 -0.89 -0.65 -0.73 -0.51 -0.39 -0.54 -0.52 -0.66 -0.81 -0.96 1.95 2.35 -0.89 0.41 -1.28 -0.97 -0.23 -1.48 1.09 -4.1 -0.98 -0.79 1.8 -0.56 -0.19 -0.21 -0.62 -0.63 -0.73 -1.08
-0.02 -0.75 -0.79 -0.58 -0.3 -0.83 -0.29 -0.08 0.16 0.19 0.38 0.14 -0.31 -0.23 -0.17 0.25 -1.79 -1.81 0.88 -0.73 0.66 -1.38 -0.95 -0.45 -1.79 1.51 1.11 0.71 -0.55 -0.49 0.19 0.94
-0.55 -1.02 -1.94 -1.97 -1.61 -1.44 -2.28 -0.45 -1.74 -1.98 -1.63 -1.5 -1.38 1.75 1.21 0.66 -3.43 -1.1 0.79 -2.98 0.51 - -2.92 -2.03 2.1 2.65 1.6 0.02 -1.91 -2.62 -1.32 -2.63
-0.22 -0.19 -0.42 -0.74 -1.15 -0.61 -0.87 -0.63 -0.89 -0.63 -0.59 -0.34 1.18 2.29 -0.98 1.0 -0.16 -0.12 -0.04 -1.95 1.06 -3.96 -0.23 -0.5 1.36 -1.27 -1.67 -1.73 0.29 0.09 0.02 -0.6
-0.6 -0.95 -1.33 -1.12 -0.76 -1.49 -1.35 -1.17 -0.74 -0.96 -0.65 -0.94 1.01 0.79 -0.42 1.51 -2.07 -1.77 0.75 -6.18 1.09 - -1.09 -0.89 1.27 2.15 0.47 0.36 -0.64 -0.63 0.24 0.24
-0.15 -0.95 -0.89 -0.9 -0.93 -0.78 -0.36 0.05 0.41 0.33 0.24 -0.24 -0.1 -0.49 -7.1 0.61 -0.69 -1.07 0.87 -0.73 1.49 -5.38 -1.25 -1.06 0.56 1.35 0.67 1.07 0.13 0.35 -0.49 -0.47
-0.52 -1.03 -1.4 -1.24 -1.36 -1.29 -0.75 -0.26 -0.42 0.05 -0.18 -0.17 -0.0 1.47 -0.11 1.08 -0.27 0.04 0.52 -0.16 -0.34 -1.89 0.11 0.17 -0.55 0.84 -0.28 -0.75 0.54 0.34 0.95 0.52
0.1 -0.34 -0.44 -0.21 -0.19 -0.08 -0.48 -0.05 -0.2 -0.09 -0.16 -0.27 0.21 0.42 0.19 0.22 -0.11 0.24 0.51 -1.83 1.02 -0.36 0.21 0.24 0.8 -0.38 -0.59 -0.72 -0.13 -0.1 0.2 -0.05
-0.01 -0.14 -0.17 -0.26 -0.27 0.04 -0.06 -0.1 0.14 -0.0 0.05 -0.2 -0.47 0.6 -0.12 0.17 -0.17 -0.2 0.28 -0.78 0.84 -3.98 0.19 -0.05 -1.41 0.16 0.54 0.4 -0.07 -0.07 0.37 0.44
-0.5 -0.51 -0.38 -0.2 -0.29 -0.01 -0.38 -0.02 -0.09 -0.25 -0.51 -0.44 0.2 0.43 0.37 0.44 -0.13 0.18 0.5 -0.23 0.46 -0.65 0.1 -0.0 -0.04 0.32 0.6 0.52 -0.14 -0.03 -0.41 -0.32

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.