Heatmap: Cluster_90 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
- - -1.52 - 1.93 -1.74 - - - -2.44 - -1.98 -0.47 0.91 0.96 0.25 -2.78 1.06 -0.61 - - - -0.25 -1.26 0.02 2.63 2.22 2.12 -3.05 -1.92 -2.96 -1.02
-0.68 -0.18 -0.81 -0.46 0.01 -0.2 -0.36 -0.28 -0.1 -0.23 -0.53 -0.32 0.96 0.5 0.9 0.55 -1.52 -0.05 0.33 -7.13 -1.1 -5.14 -0.38 0.01 0.86 1.25 1.32 1.16 -0.78 -0.68 -1.5 -1.23
-3.13 - -2.18 - - 0.35 -2.51 - - - -3.15 - -2.47 - -0.1 -2.65 -3.74 0.18 -2.99 -1.47 -1.8 -2.85 -2.95 -3.81 1.11 2.86 2.92 3.16 -3.04 -5.0 -1.71 -2.87
-0.49 -0.42 -0.3 0.07 0.09 0.3 -0.0 -0.13 -0.11 0.02 -0.16 -0.27 1.08 1.06 -1.82 0.34 -0.83 -0.27 0.29 -1.77 0.46 -1.03 -0.35 -0.39 0.38 0.52 0.9 0.83 -0.56 -0.59 -1.06 -0.89
-2.21 -1.33 -0.93 -0.57 0.9 -0.91 -0.62 -0.9 -1.95 -2.03 -2.15 -2.36 1.58 -0.05 1.69 0.36 -1.69 -0.62 1.54 -3.01 -0.02 -5.34 -0.65 0.39 1.52 0.8 1.0 1.35 -1.57 -1.28 -3.0 -2.3
-0.15 -0.45 -0.53 -0.13 -0.06 0.02 0.08 0.38 0.19 0.16 0.0 -0.3 0.47 0.77 0.34 0.72 -0.27 -0.43 0.22 -0.95 0.28 -1.55 -0.36 -0.27 0.45 0.69 0.03 -0.02 0.0 -0.11 -0.78 -1.17
1.01 -0.42 -0.56 -0.5 -2.83 -1.0 -1.0 -1.58 -2.1 -8.54 -0.14 0.31 2.21 -0.24 -2.46 1.78 -2.07 2.6 -0.4 - - - -1.37 -0.44 0.05 -0.56 -0.76 -0.66 0.58 0.71 -1.13 -2.42
-0.63 -0.29 0.07 0.14 0.29 0.27 0.13 0.22 0.1 0.05 0.12 -0.35 0.72 0.94 -0.0 0.64 -0.91 -0.75 -0.53 -1.01 -0.3 -0.64 0.11 0.35 0.48 -0.09 0.55 0.5 -0.89 -0.73 -1.08 -0.59
-3.47 - -3.6 0.08 -2.17 -3.16 -2.56 - - -1.76 -3.52 -1.83 0.99 -1.97 0.96 0.71 1.05 0.57 - 0.12 - -2.67 0.14 -1.14 - 1.67 2.53 - 1.94 1.77 -29.14 0.29
-1.67 1.23 -0.31 0.51 -0.38 0.76 -1.74 - -3.51 -1.87 -2.35 - -1.88 -0.32 - -2.01 -0.53 -0.52 -0.02 - - - -0.28 -0.19 1.22 0.19 2.28 3.25 -1.68 -2.98 - -3.33
-0.72 0.19 - - - - 0.28 0.13 - - - 1.25 - - - - - - - - - - 1.33 - 2.48 2.43 2.84 - 1.89 - - 0.3
-1.47 0.48 0.34 -0.61 - -0.62 - - - - - -0.38 -0.42 - - - - 1.08 3.0 - - - - - 2.2 2.72 2.28 - - - - -
0.18 0.55 -0.07 0.43 0.6 0.66 0.41 0.45 0.72 0.75 0.71 0.3 -0.62 -1.35 -2.93 -0.39 -0.9 1.59 0.28 - -2.0 -2.66 -0.03 0.02 -0.22 -0.15 0.16 -0.4 -1.11 -0.66 -0.86 -0.44
-0.84 -0.63 -0.18 -0.29 -0.1 -0.31 -0.15 -0.18 -0.12 -0.12 -0.08 -0.43 -0.85 -0.32 0.03 -0.19 -0.91 0.02 0.55 -0.32 0.48 -0.22 -0.71 -0.8 0.71 1.82 1.04 0.45 -0.5 -0.37 -0.84 -0.16
0.72 -1.35 0.19 -0.72 -0.55 -0.26 -0.75 -0.24 -1.03 0.43 -0.96 -0.08 1.83 0.09 -1.69 1.07 -0.95 -0.01 0.76 - - - -0.43 0.04 -1.68 1.34 1.23 1.23 -0.54 -1.78 -0.91 -0.16
0.5 0.17 -0.81 -0.1 -0.17 0.1 0.04 0.47 -0.2 -0.06 0.14 -0.33 -2.98 1.54 -0.58 -0.06 -1.73 1.96 -1.12 -3.03 -0.84 -2.09 -1.86 -1.51 -0.04 1.22 1.21 1.29 -1.34 -1.75 -2.84 -3.26
0.15 -0.12 -0.12 -0.15 -0.24 0.04 0.25 0.47 0.27 -0.35 -0.21 -0.31 -3.19 -0.7 -0.3 -1.49 -0.94 0.86 1.03 -5.17 -1.6 - -0.84 -0.97 0.61 1.21 1.43 1.65 -0.63 -0.74 -0.25 -0.77
0.25 0.14 0.04 0.21 0.18 0.32 0.21 0.7 0.7 0.53 0.49 0.39 -2.15 -1.03 -1.08 -1.91 -0.96 1.77 -1.14 -4.39 -0.39 -3.17 -1.56 -1.79 -0.38 1.05 1.17 1.13 -1.12 -1.01 -0.84 -1.33
-0.65 -0.02 0.15 -0.27 -0.08 -0.03 -0.41 -0.02 -0.03 0.14 0.25 -0.18 0.86 0.77 -4.07 0.55 -0.43 -0.21 -1.36 - -0.32 - -0.04 -1.4 -1.48 0.87 1.72 1.79 -0.5 -0.69 -0.89 -0.72
0.61 0.19 -0.35 0.1 0.33 0.03 0.46 0.84 0.92 1.09 0.71 0.84 -2.17 -0.32 0.1 -1.98 -2.23 1.19 -1.55 -1.22 -0.5 -2.26 -2.27 -2.04 0.11 0.87 0.58 0.78 -2.03 -1.64 -1.07 -1.08
-0.54 -1.71 -1.22 -1.26 -3.95 -1.4 -1.38 -0.03 -0.52 -0.84 -0.62 -0.01 -1.69 -0.64 -1.15 -0.75 -1.09 1.65 0.97 -2.16 -0.1 -0.89 -0.46 -0.5 1.47 1.79 1.15 2.05 -0.83 -0.85 -0.58 -1.33
-0.54 -0.18 0.1 -0.02 -0.07 -0.1 0.21 0.15 0.28 0.2 0.25 0.17 0.29 0.06 -1.76 1.29 -1.4 -0.72 0.04 -1.88 -1.44 -2.33 -1.4 -0.7 -0.7 1.0 1.56 1.17 -0.51 -0.14 -0.97 -0.38
-0.56 0.08 0.9 0.77 0.5 0.53 0.6 1.4 0.23 0.95 0.19 -0.44 -5.27 -4.65 -6.12 -5.24 -0.57 2.0 0.16 - -2.53 - -0.73 -2.23 -0.14 -0.13 0.94 1.45 -0.59 -1.22 -2.84 -3.17
-0.16 0.33 -0.28 -0.27 -0.15 -0.26 0.46 0.04 -0.05 0.23 -0.42 -0.08 -1.9 0.51 -1.16 -0.87 -0.53 0.24 0.95 - -2.98 - -0.2 0.01 1.15 0.8 1.03 1.75 -0.6 -0.52 -0.67 -1.29
0.08 0.04 -0.62 0.3 -0.37 0.29 0.94 0.28 0.61 0.93 0.49 0.52 - -4.41 -4.67 - -0.06 1.79 -1.36 - -1.14 -2.41 0.47 -0.49 1.05 -0.49 -0.47 0.46 0.17 0.17 -0.18 -0.0
-0.34 -0.75 -1.05 -1.0 -0.96 -0.83 -0.47 -0.94 -1.51 -0.66 -0.72 -0.91 -0.44 -2.28 -3.76 -1.81 -3.09 1.84 -1.28 -1.23 -0.99 -3.34 -2.37 -2.16 -1.26 3.39 2.07 1.14 -2.16 -1.89 -1.86 -2.09
-0.34 -0.08 -0.22 0.41 0.13 0.65 0.15 0.51 0.07 -0.25 -0.35 -1.08 1.25 0.82 0.74 0.52 -0.26 -0.91 -0.07 -1.91 -3.77 - -0.38 -0.66 -1.16 0.03 1.25 1.34 -1.03 -0.57 -0.97 -1.41
0.31 0.32 0.06 -0.1 -0.13 0.16 -0.29 0.12 0.16 0.27 -0.03 -0.07 -3.64 -0.35 -1.46 -3.2 -1.1 0.6 0.95 0.47 -0.83 -2.71 -0.58 -1.25 0.3 1.36 1.35 1.49 -0.91 -0.89 -1.45 -1.73
-0.12 -0.66 -0.21 0.27 0.31 -0.08 0.35 0.03 -0.82 -0.22 -0.28 0.14 -1.63 -0.05 -2.48 -0.35 -0.68 0.82 1.13 - -3.69 -2.43 -0.63 -0.25 0.32 1.1 1.51 1.46 -0.41 -0.36 -0.48 -0.52
0.61 0.58 -1.89 -0.04 0.58 -0.54 -0.71 -0.9 -0.4 -1.29 -1.0 0.55 1.47 -1.41 -0.27 0.48 -1.65 0.28 1.42 -4.12 - - -1.52 -1.59 -2.19 1.35 0.94 1.89 -0.32 -0.3 -1.08 -1.11
0.93 -0.37 0.8 0.57 -3.07 -0.3 -0.47 0.24 -0.87 -0.31 0.08 0.34 0.6 0.17 -0.47 -1.07 -4.28 -2.33 0.79 - - - -3.29 -0.44 -0.73 2.4 1.69 1.67 -2.66 -1.7 -2.62 -
-0.97 0.84 - -0.34 -0.07 -0.87 - -2.06 -0.98 - -1.64 -1.83 -0.14 -1.74 -0.57 0.89 -2.34 2.46 -1.29 - -0.05 - -1.36 -0.82 1.92 1.31 1.82 1.55 -1.43 -0.28 -1.36 -
0.91 1.24 - - - 0.35 - - - 0.06 - - - - - - - 0.69 1.38 - - - 1.44 1.38 2.52 1.47 1.87 - 1.33 - - 0.32
-0.16 -0.17 0.09 0.05 -0.25 -0.07 -0.16 -0.04 -0.04 0.24 0.05 -0.12 0.03 -0.12 -0.45 -0.17 -0.57 0.88 -0.1 -2.9 -0.13 - -0.16 0.03 1.02 1.16 0.94 0.94 -0.76 -0.58 -0.99 -0.97
0.5 0.2 -0.29 0.3 0.06 0.11 0.23 0.59 0.35 0.49 0.43 0.81 -3.09 -2.56 -3.53 -2.85 -1.22 1.92 -1.36 -1.78 -0.33 -5.15 -1.98 -2.51 -1.34 2.01 1.01 1.09 -1.36 -1.58 -0.94 -1.59
-0.05 -0.11 0.19 -0.03 -0.87 -0.07 0.09 0.24 0.25 1.26 0.73 0.69 -0.55 1.64 0.34 -1.12 -2.95 2.22 -1.01 - - - -2.35 -1.42 -0.38 0.87 1.21 -1.79 -2.06 -1.68 -3.04 -3.09
-0.95 -0.99 -1.74 -1.29 -1.34 -1.49 -0.95 -0.68 -1.04 -0.85 -0.95 -1.4 -0.41 0.51 0.75 0.24 -3.13 1.44 -0.9 -4.28 1.34 1.0 -1.7 -1.0 1.45 1.91 1.54 1.31 -2.86 -1.87 -3.23 -1.97
-0.53 -0.36 -0.46 -0.59 0.22 -0.37 -0.91 -0.59 -0.34 0.02 0.03 -0.42 1.28 0.38 1.18 0.96 -1.8 0.46 0.19 -2.47 -1.6 -0.99 -0.33 0.59 1.21 0.84 0.12 0.68 -1.41 -1.24 -1.48 -1.39
-1.76 0.58 1.34 - - - - -0.53 - 0.51 - - -0.08 - - - - - 0.8 - - - - -0.28 1.82 2.39 2.18 2.99 -0.34 - - -
-1.02 -1.36 -2.07 -0.05 -1.56 -0.92 -1.43 -0.79 -0.63 -0.84 0.09 -1.56 0.26 -0.63 -0.66 -1.33 - 2.69 0.79 -0.7 0.04 - -2.55 -1.79 2.69 1.23 0.57 0.83 -4.65 -2.53 -3.68 -
-3.0 - - - -3.23 0.22 1.67 1.84 1.29 0.5 0.42 0.17 - - -2.92 - -1.6 2.88 -3.42 - - - - - -1.06 -0.67 2.05 1.89 -3.24 -1.63 -3.05 -3.72
1.0 - - - - - - - - -0.23 - 1.58 0.34 - 0.47 - - 3.67 - - - - - - 3.27 - - - - - 0.16 -
-1.16 -0.5 -2.14 -1.04 -0.68 0.93 0.07 -0.61 -1.03 0.42 0.01 -0.21 0.84 -0.03 -0.41 -0.42 -3.06 0.71 -1.29 - -2.84 1.14 -2.49 -1.85 - 1.78 1.87 1.96 -1.71 -0.98 -0.68 -0.91
0.35 - - - - 0.96 - 2.4 - - -1.8 0.62 2.07 -25.28 - 1.15 - 3.94 - - - - - - - - - - - - - -
-1.08 -1.7 -0.56 -1.47 1.34 0.83 0.21 0.77 0.86 0.23 -2.91 -2.0 -0.56 1.95 -1.0 -0.66 -1.42 0.15 -1.09 - -1.21 - -0.73 -1.02 -1.44 0.15 1.16 1.53 -0.06 0.3 -0.26 -0.22
0.13 0.39 0.32 0.21 -0.11 0.01 -1.26 -0.47 -0.03 0.2 0.34 -0.05 -2.7 -0.8 -0.14 -3.72 -2.39 -0.07 -2.22 1.32 - -1.75 -4.47 -1.6 -2.43 3.55 -0.97 -2.25 -2.09 -1.74 -1.92 -3.52
0.51 0.42 0.17 0.43 0.35 0.49 0.28 0.59 0.71 0.7 0.5 0.72 -1.4 -2.98 -4.67 -1.38 -0.57 1.11 -0.88 -5.94 -2.14 -4.18 -0.39 -0.46 -0.52 0.67 0.59 0.28 -0.32 -0.47 0.35 0.22
-0.61 -0.11 0.02 -0.03 0.1 0.14 0.65 0.1 0.46 0.25 0.05 0.02 0.73 -0.16 -1.73 1.28 -0.83 -0.77 0.98 -2.77 -2.44 -6.14 -2.03 -1.26 -0.54 0.55 0.33 0.1 -0.04 0.53 0.21 0.61
0.81 0.07 0.31 0.13 -0.46 -0.21 0.03 0.04 0.28 0.54 0.59 0.72 -3.24 -2.0 -3.15 -2.41 -0.56 1.68 -0.99 -2.44 0.61 -4.47 -0.66 -1.23 1.58 0.53 0.21 0.15 -0.76 -0.45 -0.63 -0.17
0.49 0.13 -0.3 0.26 0.02 0.23 0.32 0.52 0.32 0.48 0.43 0.75 -2.34 -2.34 -3.05 -2.21 -0.61 0.85 -1.07 -2.62 0.73 -1.86 -1.18 -1.66 0.65 1.71 0.75 0.69 -0.87 -0.7 -0.54 -1.23
0.21 0.19 0.05 0.16 -0.01 0.27 0.39 0.48 0.4 0.43 0.25 0.32 -0.77 -0.76 -0.54 -0.63 -0.85 0.02 -0.17 -0.63 0.22 0.12 -0.61 -0.58 0.96 0.56 0.58 0.59 -1.01 -0.68 -1.37 -1.19
0.07 -0.38 -1.18 -0.46 0.05 0.28 0.01 0.72 0.71 -0.08 -0.56 -0.4 -0.31 -0.68 0.03 -0.23 -0.62 0.38 0.69 -2.1 -4.21 -0.2 -0.2 -0.01 0.83 0.66 0.85 0.68 -0.16 0.02 -0.37 -0.38
0.35 -0.1 -1.37 -3.38 -2.43 -2.19 -2.98 -2.19 -1.4 -2.71 -1.08 -1.26 1.71 1.16 1.11 0.17 -2.96 2.35 0.43 - - - -1.04 -0.93 0.61 2.17 1.18 0.13 -1.93 -1.99 -0.6 -2.35
1.07 0.07 -0.83 -1.02 -1.69 -1.23 -0.29 -2.38 -1.22 -2.36 -1.1 -0.73 1.54 -0.69 -1.33 1.79 -0.5 2.83 0.66 - - - -0.44 -0.24 - -1.02 -2.81 -0.8 0.63 0.63 0.22 -0.98
1.55 0.73 -1.22 -1.04 -0.78 -1.22 -1.56 -0.41 -0.13 -0.54 -0.12 0.65 0.95 0.98 -1.71 1.12 -1.89 2.43 0.68 - - - -0.7 -0.8 -2.1 -0.46 -1.12 - 0.47 0.17 0.32 -1.69
-0.85 -0.22 -0.93 -0.19 1.17 -0.24 0.38 -0.93 -1.01 -0.43 -0.67 -0.13 0.53 0.46 0.2 0.6 -0.51 -0.4 -1.4 -2.19 -0.96 0.17 -0.73 -1.4 -0.32 1.81 2.04 0.33 -1.47 -1.06 -1.33 -1.32
-0.88 -0.71 -0.44 -0.43 -0.46 -0.07 -0.1 -0.12 -0.34 -0.34 -0.37 -0.66 0.92 1.22 0.05 1.02 -1.29 -0.83 -0.06 -1.41 0.36 -2.47 0.27 0.64 0.21 0.32 1.09 1.15 -0.74 -0.5 -1.03 -1.06
0.18 0.8 -0.67 1.17 -1.11 0.98 -0.06 0.33 -0.19 1.77 -0.52 0.93 -2.96 -0.36 - - -2.88 1.02 -3.2 - - - -3.14 -1.51 1.78 1.09 1.67 0.32 -1.28 -1.57 -3.17 -2.25

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.