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Heatmap: Cluster_183 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.36 0.38 0.67 0.46 0.01 0.44 0.7 -0.12 0.15 0.61 0.26 0.34 -2.25 -3.67 -4.71 -1.58 1.28 0.53 0.62 -0.63 -2.42 -0.23 -1.66 -1.59 -1.57 -0.88 -0.72 0.27 0.79 0.83 0.29 -0.69
0.83 1.07 0.37 0.47 -0.38 -0.5 -0.57 -0.73 -0.45 -0.62 -0.15 1.21 -4.8 -1.63 -4.64 -4.26 1.81 0.8 -2.44 -5.28 - - -3.26 -1.55 -0.82 -1.38 -1.83 -4.24 1.47 0.8 1.43 1.7
0.5 0.9 0.7 0.39 0.13 0.01 0.23 0.14 0.22 0.5 0.74 1.21 -0.23 -2.04 -3.02 -0.75 0.54 0.46 -1.35 -1.98 0.1 -2.97 -0.27 -0.58 0.12 -1.4 -1.08 -0.88 0.43 0.31 -0.28 -0.05
0.07 0.06 0.13 0.02 -0.06 0.01 0.16 -0.23 0.0 0.18 0.1 -0.03 -1.2 -0.23 -0.47 -0.84 0.61 -0.27 -0.47 -1.69 -2.92 -0.89 1.07 0.63 -4.74 -0.77 0.28 0.67 0.81 0.78 0.33 0.31
1.63 0.34 -1.05 -1.58 -1.84 -2.42 -1.41 -1.47 -1.19 -0.62 -0.07 1.02 -6.99 -8.7 -7.6 -3.06 -0.01 -0.1 1.38 -2.2 -0.58 -9.15 -0.23 -0.42 -1.94 -0.93 -1.53 -1.17 1.33 1.33 2.33 1.48
0.85 0.69 0.39 0.32 0.23 0.16 -0.2 -0.06 0.04 -0.06 0.29 0.09 -3.08 -1.66 -1.8 -2.1 1.02 0.15 -0.9 -2.17 -3.71 -2.45 0.96 0.35 -0.73 -1.9 0.49 0.42 0.93 1.05 -0.25 -0.18
0.88 0.34 0.13 0.24 0.21 0.22 0.41 -0.11 0.33 0.35 0.54 0.57 -1.76 -0.95 -0.45 -1.18 0.61 0.59 0.67 -2.1 -1.37 -3.89 -0.87 -1.43 0.02 -1.67 -0.16 -0.37 0.7 0.71 0.14 -0.01
1.27 0.66 0.36 0.09 -0.23 -0.15 0.09 0.41 0.51 0.5 0.64 1.1 -5.0 -2.5 -3.5 -3.72 0.46 0.99 -0.36 -2.73 -0.03 -2.78 -0.53 -1.43 -0.2 -1.38 -0.58 -0.43 0.83 0.78 0.09 -0.16
0.57 0.63 0.8 0.48 0.29 0.41 0.5 -0.2 0.29 0.29 0.35 0.0 -0.51 -0.24 -2.39 0.13 0.91 0.86 0.11 -7.85 -3.37 -1.82 0.53 -0.43 -1.81 -2.04 -1.07 -0.6 0.41 0.51 -0.11 -0.44
0.38 0.45 0.58 0.26 -0.1 -0.17 0.42 -0.22 0.59 0.67 0.66 0.99 -0.78 -1.12 -0.65 -0.16 1.45 0.59 -1.11 -1.06 -3.2 -1.8 -1.54 -1.53 -5.13 -2.15 -2.72 -1.61 0.98 0.97 0.42 0.16
1.07 0.62 1.01 0.47 -0.9 -0.32 -0.43 0.26 0.29 0.46 0.37 0.76 -5.8 -6.69 -9.22 -4.3 0.62 -0.16 0.02 -2.32 -0.24 -4.6 -0.65 -1.4 0.26 -0.22 0.7 1.13 0.56 0.51 -0.02 -0.45
0.4 0.27 -0.0 -0.08 -0.17 -0.35 -0.32 -0.42 -0.08 -0.16 -0.02 0.24 -0.19 -0.53 -1.03 0.02 0.76 0.34 0.49 -1.72 0.2 -5.34 0.42 0.46 0.33 -0.58 -0.82 -0.65 0.72 0.74 0.22 0.1
1.0 1.07 0.71 0.29 -0.14 -0.01 0.09 -0.01 -0.02 -0.1 0.07 0.36 -3.63 -1.95 -2.55 -2.36 0.84 0.58 -0.69 -1.49 -1.05 -1.59 0.14 -0.33 -0.52 -1.45 0.41 0.67 0.66 0.7 0.38 -0.56
1.17 0.65 0.24 -0.08 -0.2 -0.24 0.01 0.49 0.71 0.84 1.0 1.21 -2.63 -1.83 -2.13 -1.83 0.01 0.28 -0.31 -1.18 -1.66 -4.27 0.1 0.06 -1.49 -0.71 -0.1 0.14 0.51 0.58 -0.33 -0.81
1.33 1.44 0.88 0.6 0.01 -0.57 -0.15 -0.66 0.06 0.33 0.71 1.5 -0.8 -1.63 -1.14 -0.51 0.91 0.3 0.17 -4.42 -3.94 -2.84 -0.12 -0.67 -4.51 -2.25 -2.18 -2.23 0.74 0.59 -0.41 -0.46
0.81 1.1 0.83 0.59 0.52 0.63 0.59 -0.33 -0.25 -0.73 -0.8 -0.29 -2.02 0.52 -0.03 -0.75 0.63 0.09 0.21 -1.91 -0.05 -5.97 0.42 -0.19 -0.49 -1.49 -0.48 0.46 0.1 0.18 -0.99 -1.43
0.75 0.57 0.48 0.36 0.28 0.35 0.42 0.66 0.5 0.29 0.21 0.35 -0.5 0.16 -0.1 -0.34 -0.25 -0.26 0.21 -3.06 -2.31 -5.01 -0.52 -0.34 -0.13 -0.4 0.37 0.35 -0.05 -0.0 -0.62 -0.74
1.06 0.74 0.64 0.36 -0.04 -0.2 0.05 -0.09 0.36 0.56 0.76 1.17 -6.16 -3.66 -4.72 -3.53 1.19 0.55 -0.88 -3.75 -1.32 -3.48 -0.45 -1.02 -4.01 -2.19 -0.99 -0.77 0.94 0.75 0.8 0.92
0.13 0.15 0.11 0.0 0.01 0.02 0.23 -0.41 0.1 -0.15 0.09 0.07 -1.41 0.62 0.76 -0.47 0.78 0.58 0.24 -2.25 -0.94 -1.27 -0.65 -0.46 -0.45 -1.21 -0.7 -0.39 0.58 0.67 0.51 0.48
1.51 1.42 1.01 0.54 0.18 -0.19 -0.37 -0.48 0.07 0.06 0.6 0.8 -1.83 -0.66 -1.83 -1.22 0.98 0.5 -0.72 -4.51 -2.31 -5.99 -0.1 -0.27 -2.47 -1.89 -0.84 -0.64 0.44 0.33 0.09 0.25
0.75 0.68 0.69 0.41 0.45 0.27 0.27 0.14 0.33 0.5 0.63 0.82 -0.88 -1.06 -1.35 -0.5 0.84 0.63 -0.26 -3.77 -4.08 -3.81 -0.29 -0.28 -4.07 -0.2 -0.48 -0.42 0.31 0.28 -0.08 -0.04
0.8 1.02 0.92 0.49 0.62 0.61 0.06 -0.25 0.06 -0.45 -0.07 -0.32 -2.4 -0.12 -0.06 -1.39 1.06 0.88 -0.07 -3.96 - -6.11 0.31 0.35 -0.99 -1.46 -0.31 0.16 0.28 0.65 -0.87 -1.27
1.01 0.91 1.17 0.74 -0.16 -0.15 -0.3 0.49 0.37 0.66 0.92 1.01 -3.65 -4.25 -3.49 -2.19 0.43 -5.24 -0.6 -0.25 0.1 -7.15 -1.22 -2.39 0.4 0.34 -0.06 0.35 0.56 0.28 -0.83 -1.73
0.6 0.79 0.75 0.72 0.4 0.13 0.18 -0.06 0.09 0.41 0.75 1.11 -0.97 -1.49 -0.55 -0.73 0.38 -0.5 -0.27 -6.86 -2.22 -5.45 0.31 0.33 -1.69 -0.58 -0.71 -0.45 0.17 0.16 0.27 0.24
1.78 1.55 1.19 0.19 -1.41 -2.99 -3.52 -2.13 -1.44 0.51 0.91 1.2 -7.77 -10.49 - -6.44 2.03 -0.13 -2.12 -4.93 -7.5 - -0.96 -3.31 -7.67 -1.29 -7.24 -5.95 1.62 1.06 0.86 1.08
0.74 0.79 0.86 0.71 0.48 0.3 -0.04 -0.34 -0.11 0.2 0.68 0.82 -5.57 -2.31 -3.72 -2.87 0.75 0.48 -0.67 -3.6 -2.14 -3.12 -0.24 -0.44 -0.28 -1.0 0.46 0.83 0.11 0.14 0.33 0.29
0.9 0.86 0.69 0.39 0.13 0.12 0.18 -0.07 0.3 0.41 0.54 0.82 -1.58 -0.48 -1.4 -1.42 0.55 0.2 -0.68 -2.89 -0.21 -3.39 0.02 -0.03 -0.39 -1.41 -0.88 -0.58 0.17 0.22 0.6 0.1
-0.12 -0.01 0.3 0.18 0.09 0.25 0.2 0.11 0.07 -0.22 -0.01 -0.21 0.65 -0.15 -0.48 -0.71 0.51 -0.06 -0.7 -2.72 -1.81 -1.83 1.05 0.55 -0.97 -1.63 0.4 0.43 0.49 0.71 0.02 -0.21
1.91 1.52 0.55 -0.35 -1.18 -0.51 -0.94 -0.49 -0.18 0.65 0.96 1.35 -4.4 -6.28 -5.6 -2.94 0.9 0.85 0.53 - - - -0.58 -0.6 -1.83 -0.83 -2.13 -2.24 0.95 0.55 0.11 0.47
1.04 0.78 1.18 0.64 0.51 0.26 -0.99 -1.25 -0.2 -0.18 0.39 0.43 -1.49 -0.2 -1.03 -1.45 1.53 1.04 -2.87 -4.88 -3.01 -5.96 0.97 -0.78 -2.39 -2.63 -0.64 -0.28 0.71 0.55 0.01 -0.63
1.28 1.23 0.54 0.23 -0.11 -0.3 -0.24 -0.69 -0.33 -0.45 -0.08 0.52 -6.32 -2.05 -1.81 -2.04 1.21 -1.33 1.24 -4.25 -1.63 -6.24 -0.29 -0.88 -0.78 0.44 0.06 0.86 0.77 0.92 -0.33 -0.52
2.37 1.96 0.83 0.3 -1.12 -2.71 -3.99 -4.03 -4.43 -1.92 -1.01 0.15 -5.67 - -6.53 -4.49 2.46 0.32 1.33 -5.77 -3.5 - -0.15 -2.79 -2.54 -5.82 -3.89 -3.6 1.67 1.61 -3.37 -3.31
1.53 0.95 0.51 -0.06 -0.25 -0.6 -0.84 -0.52 -0.54 0.08 0.65 1.12 -1.59 -2.13 -2.88 -1.35 0.69 0.64 0.55 -3.09 -1.52 -4.84 -0.29 -0.87 -1.05 0.06 -0.29 -0.05 0.74 0.65 0.38 0.15
1.7 1.16 0.86 0.41 0.54 0.63 -0.9 -0.46 -0.16 0.22 0.35 0.34 -2.67 -1.38 -0.72 -2.91 2.06 1.38 -3.0 -1.47 -1.1 -2.02 -2.17 -3.11 -1.81 -3.29 -0.35 -0.77 -0.13 -0.21 -0.28 -0.8
0.22 0.21 0.5 0.54 0.19 0.31 0.87 0.27 0.47 -0.11 0.31 0.15 -3.07 -2.1 -1.72 -2.59 1.16 0.75 0.72 -3.05 -0.32 -2.11 -1.57 -1.74 -0.66 0.22 0.63 -0.25 0.47 0.56 -0.44 -0.38
0.86 0.62 0.33 0.38 0.18 0.0 0.11 0.45 0.82 0.79 0.76 0.93 -0.42 -0.4 -0.5 -0.15 -0.19 - -0.33 -6.6 -3.29 -6.42 0.23 0.25 -0.33 -0.19 -0.68 -0.99 0.05 -0.15 0.26 0.28
0.88 0.59 0.38 0.0 -0.16 -0.25 -0.02 -0.08 0.2 0.22 0.58 0.7 -1.67 -0.89 -0.46 -1.02 0.14 0.64 -0.5 -2.0 -0.79 -4.53 -0.35 -0.5 0.3 -0.73 -0.06 -0.21 0.49 0.46 0.52 0.65
0.9 0.72 0.49 0.19 -0.08 -0.02 0.29 0.27 0.39 0.48 0.77 0.87 -1.6 -0.72 -0.21 -1.01 0.21 -1.59 -0.38 -3.91 -1.29 -2.78 -0.46 -0.54 -0.05 -1.11 -0.55 -0.54 0.55 0.44 0.58 0.72
0.6 0.54 0.32 0.41 0.11 0.1 0.33 -0.01 0.41 0.32 0.36 0.61 -0.81 0.31 -0.35 -0.38 0.43 0.3 0.05 -9.03 -4.17 -3.26 0.25 0.21 -3.12 -1.2 -0.48 -0.44 0.33 0.53 0.45 0.15
0.96 0.9 1.05 0.6 -0.02 -0.41 -0.65 -0.77 -0.14 0.08 0.26 0.42 -2.96 -4.0 -3.96 -2.73 1.97 -2.29 -1.56 -0.01 0.63 -5.58 -0.34 -1.94 -2.65 -1.28 -0.36 -0.41 0.52 0.02 0.6 1.38
1.34 0.71 0.62 0.28 -0.13 -0.46 -0.25 -0.06 0.35 0.5 0.81 1.11 -7.35 -7.2 -7.88 -5.02 0.25 0.15 0.43 -2.29 0.28 -7.06 -0.35 -0.32 -0.61 -0.51 -1.73 -1.5 1.07 1.08 -0.05 0.16
0.25 0.46 0.59 0.61 0.74 0.87 0.25 -0.25 0.12 -0.06 -0.13 -0.41 -1.7 -2.13 -1.58 -0.94 1.3 0.39 0.65 -5.4 -1.75 -9.02 0.41 0.17 -0.04 -0.78 0.21 0.72 0.35 0.34 -1.49 -1.4
1.67 0.8 0.82 0.5 0.23 0.41 0.09 0.18 0.47 0.46 0.75 0.76 -2.3 -3.68 -5.67 -2.42 0.49 0.12 0.31 -4.37 -0.83 -7.68 -0.5 -1.01 -2.03 -0.32 -1.08 -0.09 0.92 1.03 -1.44 -1.86
1.12 0.42 -0.76 -1.23 -1.6 -2.03 -1.44 -1.11 -0.83 -0.81 0.29 0.52 -1.8 -1.92 -3.47 -1.59 0.48 0.08 1.57 -4.34 -1.64 - -0.06 -0.68 -2.85 -1.0 -0.45 -0.64 1.53 1.66 1.88 1.14
0.41 0.95 0.77 0.61 0.51 0.48 0.72 0.09 0.05 0.1 -0.09 -0.17 -1.25 -0.75 -1.47 -0.24 0.77 -0.07 -0.04 -2.65 -1.78 -5.59 0.25 -0.67 -0.95 -0.52 0.1 0.94 0.67 0.71 -1.94 -2.15
1.94 0.55 -0.02 0.09 -0.18 -0.33 0.21 0.31 0.66 1.3 1.09 1.76 -4.0 -3.1 -3.54 -4.26 -0.21 -0.2 -0.58 -4.26 -0.54 - -0.87 -1.94 -2.35 -1.08 -0.11 0.41 0.24 0.06 -0.25 -0.36
0.53 0.53 0.54 0.15 0.17 -0.25 0.41 0.08 0.14 0.47 0.82 1.15 -0.18 -2.06 -2.3 0.31 0.08 -0.3 0.13 - -7.08 - 0.41 -0.09 -7.33 0.06 -1.17 -1.11 0.81 0.51 0.49 0.46
0.8 0.71 0.41 0.38 0.33 0.32 0.56 0.45 0.5 0.58 0.46 0.67 -0.97 -0.61 -0.87 -0.48 0.21 0.03 -0.38 -3.5 -3.43 -5.99 -0.03 -0.13 -0.85 -1.07 -0.34 -0.4 0.33 0.25 0.3 0.07
1.0 1.13 0.84 0.64 0.62 0.46 0.3 0.1 0.1 0.1 0.03 0.54 -4.79 -4.66 -9.46 -3.12 0.81 0.73 -0.28 -3.83 -1.2 -8.2 -0.3 -1.24 0.4 -1.6 0.29 0.53 0.68 0.61 -0.9 -1.1
-0.33 -0.08 -0.46 -0.13 0.14 0.37 0.53 0.97 1.23 0.35 0.83 0.09 -0.91 -1.62 -0.32 -0.72 -0.1 0.4 0.0 -3.02 -3.56 0.31 0.13 0.16 -2.17 -0.32 -0.09 -0.22 0.29 0.12 0.03 0.01
0.25 0.55 0.62 0.25 -0.03 -0.32 0.69 0.15 0.16 0.4 0.67 0.77 -0.3 -0.9 -1.87 -0.33 -0.1 -0.27 0.17 -7.05 -5.35 -8.38 0.37 0.4 -5.08 1.02 -0.35 -0.28 0.23 0.23 0.15 0.38
0.51 0.54 0.53 0.49 0.5 0.31 -0.04 -0.36 0.15 -0.19 0.13 -0.11 -0.93 -0.09 -2.28 -0.23 0.24 0.06 0.29 -1.39 -1.69 -3.38 0.59 0.24 -1.29 0.21 0.16 0.44 0.24 0.38 -0.13 -0.06
0.34 0.71 0.86 0.86 0.87 0.58 -0.52 0.04 0.48 0.68 0.76 0.67 -2.36 -1.84 -1.13 -2.22 1.27 0.84 -2.29 -5.17 -3.42 -6.57 0.5 -1.81 -3.06 -1.78 -0.99 -0.72 0.8 0.68 -0.13 -0.03
0.85 0.62 0.59 0.52 0.38 0.53 -0.24 -0.11 0.29 0.13 0.21 0.07 -4.02 -2.66 -3.21 -3.71 1.16 0.73 0.94 -4.03 -1.74 -7.6 -0.78 -0.64 0.55 -0.11 0.35 0.55 0.32 0.4 -0.64 -0.85
0.74 0.78 0.46 0.62 0.0 0.37 0.55 0.09 0.49 0.79 0.31 0.96 -1.46 -0.18 -0.86 -0.93 0.38 -0.16 -0.97 -6.91 -2.78 - 0.65 0.25 -2.78 -1.92 -0.77 -0.6 0.53 0.54 0.11 -0.04
1.44 0.44 -0.16 -0.26 -0.31 -0.21 -0.01 0.4 0.53 0.86 1.1 1.49 -2.89 -2.09 -2.55 -1.58 -0.57 -0.54 -0.42 -1.18 -0.26 -0.77 -0.66 -1.01 -0.27 -1.8 -0.16 -0.45 0.7 0.67 0.13 -0.01
0.34 0.24 0.3 0.21 0.17 0.19 0.22 0.18 0.27 0.34 0.37 0.25 -1.6 -0.57 -1.13 -1.22 0.32 -0.27 -0.93 0.04 -0.28 -1.43 0.65 0.31 -0.42 -0.84 0.05 0.35 0.43 0.49 -0.16 -0.23
-0.18 -0.62 -0.41 0.05 0.22 0.25 0.07 0.43 0.96 0.85 0.69 0.02 -1.92 -1.12 -0.79 -1.09 -0.07 -0.21 -0.84 -4.0 -1.85 0.08 0.99 0.56 -1.2 -1.72 0.2 0.12 0.6 0.8 0.02 0.41
1.22 1.15 0.68 0.33 0.18 0.42 -0.21 0.35 0.77 0.51 0.66 0.6 -3.22 -3.54 -3.38 -2.87 1.48 1.15 -2.37 -5.83 1.02 -3.78 -1.27 -3.12 -0.59 -4.15 -2.07 -1.62 0.7 0.23 -0.49 -0.54
0.64 0.41 0.13 0.09 -0.01 -0.1 -0.0 -0.17 -0.13 -0.2 0.03 0.26 -1.32 -0.89 -1.31 -0.34 0.83 0.2 0.46 -3.32 0.09 -2.09 -0.04 -0.25 0.56 -0.18 0.4 0.34 0.58 0.67 -0.35 -0.59
1.23 0.46 0.23 0.13 -0.39 -0.24 -0.8 -0.86 -0.41 -0.27 -0.52 0.3 -0.96 -0.42 -1.98 -0.8 -0.17 0.27 1.24 -2.34 -1.91 -2.8 0.09 0.07 0.65 -0.34 -0.15 -0.31 1.08 1.05 0.27 0.07
0.75 0.7 0.18 0.3 0.13 0.05 -0.04 0.33 0.48 0.44 0.41 0.48 -0.28 -0.47 -0.48 -0.42 -0.03 -0.3 -0.37 -2.89 -1.58 -4.75 -0.04 -0.05 -0.41 -0.21 0.32 0.41 0.06 0.04 0.08 0.2

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.