Heatmap: Cluster_137 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
47.06 44.36 45.69 52.54 56.84 51.96 41.91 40.02 50.72 50.36 54.86 42.12 94.65 254.97 288.36 104.59 51.65 26.91 12.25 27.93 9.45 58.55 13.28 13.34 3.3 29.14 28.88 39.75 32.59 43.5 28.03 18.85
0.81 0.64 0.59 0.62 0.92 0.19 0.79 1.37 0.81 1.58 1.53 1.51 7.46 67.18 47.34 9.27 0.03 0.0 0.12 0.0 0.0 0.0 0.0 0.46 0.0 0.15 0.17 0.33 0.07 0.22 0.07 0.13
0.17 0.11 0.19 0.37 0.24 0.17 0.13 0.37 0.08 0.46 0.28 0.19 0.34 4.81 6.99 1.67 0.09 0.02 0.34 0.11 0.0 0.0 0.5 0.59 0.07 0.12 0.19 0.0 0.12 0.19 0.06 0.14
1.45 2.38 0.85 4.09 4.38 2.35 2.2 3.11 2.11 2.46 4.2 2.04 8.96 51.61 57.67 15.55 0.81 0.56 0.35 0.0 0.0 0.0 5.27 3.81 2.89 2.5 2.3 5.23 1.6 1.63 1.3 0.82
8.14 10.98 8.8 10.48 10.96 9.3 5.56 5.0 5.37 6.69 7.09 5.59 31.25 52.6 64.86 40.74 2.81 2.5 5.69 4.58 5.73 4.67 6.96 10.18 5.51 6.29 5.87 9.62 2.72 5.29 2.69 4.14
1.65 0.99 1.61 2.01 3.24 2.01 0.93 1.16 1.08 1.12 1.65 1.0 12.45 46.63 65.75 9.7 0.25 0.01 0.4 0.0 0.26 0.0 0.13 0.8 0.74 0.89 1.43 1.57 0.88 2.05 0.54 0.66
3.06 2.63 3.81 8.16 7.9 6.38 3.79 4.47 3.84 5.35 4.08 4.33 52.69 170.61 139.48 50.94 1.68 0.31 2.25 14.9 14.01 2.51 3.93 9.68 10.7 12.5 13.62 9.25 3.61 5.31 2.14 3.44
47.39 40.84 33.26 36.72 30.5 31.67 12.81 21.67 28.44 36.68 35.08 38.86 99.23 152.94 202.37 61.29 3.25 4.52 1.86 0.0 0.0 0.78 3.52 7.33 4.51 18.34 20.65 25.47 4.01 8.77 4.07 3.79
39.6 24.88 28.51 55.43 44.43 36.81 36.59 48.5 35.51 62.27 59.43 55.6 467.26 1058.24 1533.64 333.4 0.91 0.26 0.88 0.05 0.0 0.0 0.59 15.23 5.99 20.92 14.92 28.64 3.9 9.97 1.09 5.77
93.76 106.82 90.22 82.73 91.39 88.3 90.58 51.47 50.85 39.61 55.34 49.24 167.37 678.89 365.76 295.27 85.1 117.81 109.53 20.49 33.75 30.55 83.88 114.14 56.22 38.89 97.1 100.5 80.11 106.45 70.42 77.85
168.98 197.87 206.2 217.41 196.09 193.6 190.97 195.28 189.77 183.67 177.23 180.49 265.01 628.08 407.15 254.75 163.79 155.41 182.49 45.27 43.41 22.11 178.73 178.81 150.67 136.05 182.17 184.52 152.91 166.68 125.0 125.38
190.75 211.6 227.08 210.96 219.07 218.81 171.62 173.77 181.45 175.13 187.99 179.72 415.54 896.18 547.43 346.18 222.61 215.31 307.58 70.53 48.63 47.1 271.92 266.06 121.47 174.8 209.97 152.02 209.25 205.69 135.64 130.87
5.6 3.58 3.54 4.04 4.31 3.55 3.2 4.62 5.44 7.69 6.9 5.22 22.04 52.12 55.63 25.75 0.46 0.37 0.94 0.57 0.12 0.07 1.13 2.68 0.33 8.18 4.56 6.24 0.56 1.2 0.57 0.96
18.08 19.37 11.0 10.28 9.19 7.28 6.74 5.46 7.01 8.62 8.6 9.66 44.38 95.44 110.48 45.9 5.4 1.23 3.11 0.0 0.31 0.0 1.97 5.12 2.12 3.04 5.97 3.3 7.7 7.98 6.85 6.17
27.59 31.11 37.57 52.52 69.98 47.85 42.06 43.91 50.76 51.1 38.53 27.13 109.64 294.66 269.79 132.42 11.12 5.61 14.4 15.64 30.65 37.57 11.55 23.94 47.92 33.24 44.29 47.59 19.7 24.51 13.6 17.77
10.89 12.25 9.99 12.64 10.37 11.75 10.93 10.9 13.05 12.95 12.42 11.54 51.79 85.14 120.83 38.39 5.15 3.13 11.02 7.77 1.86 12.19 8.96 16.38 7.37 12.47 6.49 7.97 6.77 7.58 5.18 4.96
0.32 0.22 0.38 0.87 0.32 0.19 0.34 0.43 1.43 0.61 0.64 0.31 6.26 13.99 17.76 8.33 0.03 0.63 0.03 0.0 0.0 0.0 0.0 0.16 0.13 0.2 0.49 0.44 0.17 0.28 0.0 0.0
6.2 7.07 6.75 9.7 11.88 10.1 6.84 5.89 6.75 8.78 6.75 5.93 30.18 174.97 100.76 39.64 8.75 25.7 10.64 25.45 14.43 22.01 19.27 19.31 6.13 4.89 4.67 4.65 22.77 25.63 22.15 25.96
147.9 166.38 147.27 129.17 128.22 115.16 103.97 106.12 114.33 116.46 119.75 129.69 231.08 614.85 307.25 204.46 96.96 72.34 158.81 22.6 72.96 13.32 151.66 195.54 133.09 120.1 106.69 101.44 87.82 97.57 79.08 94.85
0.74 0.29 0.4 1.81 2.41 0.72 0.5 1.27 0.31 0.74 0.92 0.77 18.25 107.01 96.42 16.9 0.05 0.0 23.24 0.0 0.0 0.0 0.0 0.31 0.19 0.2 0.8 1.51 0.04 0.31 0.05 0.11
8.44 6.86 8.81 14.16 10.94 11.57 12.62 13.43 8.18 13.87 13.64 11.79 225.98 860.91 589.11 74.94 2.32 10.32 4.11 6.76 0.37 4.32 2.23 9.45 3.97 4.32 6.33 10.25 4.52 9.09 1.92 4.95
3.06 5.92 3.75 6.67 6.94 5.99 9.47 10.51 12.84 6.61 8.91 7.46 0.34 59.64 56.43 0.8 10.58 1.56 2.11 0.36 5.51 1.63 2.74 1.6 9.73 4.57 5.64 5.9 6.43 6.55 5.21 4.03
2.07 1.36 2.37 3.92 2.7 3.99 4.18 3.52 2.43 2.1 2.54 1.46 23.71 143.65 93.76 7.05 0.85 1.12 0.92 7.64 0.0 1.59 0.33 1.56 2.49 1.67 2.02 1.5 0.44 1.45 0.39 0.48
1.11 1.29 0.72 1.99 1.3 1.72 1.55 1.4 1.84 1.74 1.56 1.59 5.11 29.13 19.84 5.43 1.8 0.39 2.86 3.76 4.12 6.63 2.84 3.69 4.69 1.71 2.3 1.82 1.57 1.82 0.85 0.55
0.96 1.12 0.97 1.32 1.72 0.95 1.67 0.82 1.06 1.36 1.53 1.47 3.72 7.29 7.09 2.96 0.73 0.31 0.12 0.52 0.1 0.98 0.21 0.47 0.27 1.76 0.81 0.99 0.4 0.54 0.34 0.44
4.11 4.99 5.35 6.16 5.53 5.85 4.98 5.48 4.54 5.17 3.8 4.39 9.06 47.82 22.87 14.68 4.15 2.39 5.67 10.61 1.34 6.03 4.43 4.4 1.21 2.27 2.77 3.67 4.0 4.21 4.73 4.24
1.19 0.83 0.77 1.21 2.43 0.75 1.03 1.57 2.09 0.74 0.59 1.41 3.36 37.16 23.86 3.84 1.1 0.0 1.83 5.5 8.87 7.72 2.01 1.63 11.72 3.98 3.57 3.39 1.18 1.02 1.12 0.79
12.32 16.34 15.11 16.79 14.75 13.02 14.85 13.75 13.87 14.05 14.39 13.73 29.8 115.83 114.52 40.36 7.62 6.62 6.38 1.69 9.52 1.91 9.57 16.62 11.58 6.61 9.02 5.58 6.51 10.31 4.83 7.48
2.27 2.49 2.39 5.42 4.8 4.21 4.87 1.82 3.16 5.02 3.31 4.29 1.46 31.27 37.32 10.91 1.22 3.45 0.38 0.0 0.0 1.91 0.66 1.18 2.17 2.06 1.24 3.13 0.77 2.33 0.38 1.67
0.55 0.3 0.09 0.73 0.46 1.73 0.45 0.53 0.49 0.47 0.2 0.8 3.34 7.52 9.7 4.26 0.0 0.0 0.33 0.0 0.0 0.0 0.14 0.26 1.18 0.61 0.0 1.15 0.0 0.16 0.0 0.0
0.05 0.09 0.02 0.08 0.19 0.02 0.0 0.06 0.14 0.04 0.03 0.09 0.22 2.9 3.76 0.51 0.0 0.04 1.49 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0
1.27 1.08 0.76 1.5 1.74 1.3 2.02 1.65 1.16 2.44 2.27 1.69 15.26 46.0 56.99 17.42 0.12 0.09 0.91 0.0 0.07 0.0 0.05 0.91 0.06 0.83 0.6 0.78 0.38 0.82 0.22 0.55
0.73 0.8 1.05 1.92 1.04 0.76 0.98 0.95 0.85 1.73 1.22 0.83 3.81 18.65 15.31 14.14 0.05 0.07 0.13 0.0 0.0 0.0 0.05 0.41 0.0 0.37 0.19 0.9 0.35 0.63 0.18 0.44
1.1 1.19 1.08 1.31 1.54 1.12 1.3 1.32 0.94 1.21 1.92 1.33 3.87 32.86 24.57 9.67 0.68 0.91 1.19 0.36 0.0 0.0 0.68 1.09 0.32 1.03 0.92 1.26 0.73 0.93 0.48 0.56
0.17 0.1 0.26 0.26 0.17 0.16 0.19 0.12 0.19 0.28 0.35 0.17 1.08 3.0 3.55 1.58 0.04 0.62 0.35 0.06 0.0 0.0 0.02 0.12 0.13 0.2 0.16 0.17 0.04 0.04 0.02 0.03
5.9 0.3 0.5 4.65 4.19 9.23 0.23 5.79 1.06 4.01 2.37 2.65 19.03 232.56 214.59 94.08 0.0 0.0 0.13 0.0 0.0 0.0 0.0 5.44 1.25 1.98 0.97 0.0 0.61 2.74 0.82 0.95
4.47 0.19 0.08 1.88 2.27 11.15 1.46 2.82 0.09 3.34 6.59 3.49 23.25 180.0 150.7 48.54 0.33 0.0 0.4 0.0 0.0 0.0 0.18 2.6 0.0 3.85 0.0 0.0 0.35 3.19 0.74 0.66
0.27 0.27 0.18 0.58 0.35 0.25 0.4 0.35 0.37 0.59 0.35 0.36 1.13 16.9 16.18 2.19 0.13 0.19 3.23 0.2 0.28 0.0 0.17 0.21 0.15 0.25 0.29 0.6 0.17 0.18 0.1 0.06
0.22 0.0 0.04 0.27 0.0 0.05 0.25 0.04 0.04 0.21 0.41 0.29 1.02 6.44 4.13 1.0 0.0 0.0 0.67 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.25 0.0 0.26 0.0 0.05
0.82 0.52 0.3 1.32 0.84 0.83 1.44 1.34 1.42 1.8 1.26 1.34 4.07 21.1 15.68 9.21 0.17 0.25 0.29 0.0 0.0 0.0 2.34 2.09 0.44 0.85 0.42 1.44 0.52 0.59 0.2 0.43
2.85 2.22 0.5 1.27 0.92 9.55 0.86 3.28 1.42 5.44 3.75 2.11 42.35 180.86 240.44 89.51 0.09 0.0 0.75 0.0 0.0 0.0 0.0 3.54 0.0 0.72 2.09 0.0 0.89 3.91 0.57 1.3
11.21 11.09 10.13 10.52 10.39 10.07 8.97 8.9 7.97 9.56 9.68 7.55 38.77 159.7 117.04 78.07 3.44 6.67 12.85 0.0 0.0 0.0 4.28 4.93 20.68 8.76 8.47 10.7 4.43 5.96 2.9 2.7
3.05 2.33 2.85 3.68 4.79 4.42 2.84 4.2 6.41 4.31 6.5 3.81 23.8 75.87 40.05 27.11 4.18 5.51 15.62 0.85 0.1 0.12 3.52 2.57 2.76 5.36 5.23 5.78 3.33 4.26 6.29 5.86
1.24 1.25 0.74 2.02 1.72 2.0 1.38 0.99 1.06 1.67 1.7 1.61 16.45 38.75 54.34 13.59 0.72 0.21 0.89 0.02 0.0 0.0 0.25 0.88 1.45 0.13 0.29 0.55 0.72 1.03 0.4 0.57
14.64 18.86 18.71 21.58 19.87 22.8 19.87 16.48 18.97 18.51 19.12 15.81 23.34 77.68 112.59 24.63 14.76 15.36 7.94 14.8 6.33 23.64 7.94 9.82 13.12 6.34 8.89 11.96 9.92 12.02 9.46 8.25
207.06 251.46 223.16 184.43 172.35 215.36 155.03 208.59 193.28 187.44 212.56 170.24 34.98 2255.05 1210.42 286.28 48.33 0.28 174.73 4.75 38.55 0.29 66.92 55.87 135.45 178.06 82.12 38.69 75.75 82.3 84.48 92.16
161.78 125.11 103.1 196.99 190.33 192.37 180.73 215.66 180.77 248.3 243.13 216.08 2967.02 4543.73 9452.89 1228.55 2.75 0.24 5.62 2.92 0.0 0.66 4.9 74.98 264.36 67.34 76.78 166.12 29.0 148.27 9.1 148.87
2.16 2.08 2.45 2.2 2.49 2.03 1.0 1.34 1.57 2.07 2.86 2.15 5.66 27.11 26.86 15.02 1.05 2.14 4.58 2.63 0.8 0.0 1.61 1.85 1.21 5.99 1.97 1.62 1.73 1.84 1.55 1.52
301.76 330.09 350.82 367.68 385.0 439.72 398.67 365.49 352.14 337.63 308.48 312.72 418.23 1037.93 1063.3 638.8 339.24 278.22 353.8 164.77 324.21 334.36 390.36 371.6 394.15 278.13 365.31 397.99 346.35 355.5 320.94 341.83
6.76 8.08 9.04 9.6 9.24 10.32 10.99 7.09 8.36 6.67 6.78 7.02 13.3 44.31 34.56 14.25 7.34 6.52 6.52 3.01 5.08 2.26 4.51 5.31 1.08 3.32 3.51 5.23 6.31 6.31 2.74 1.95
930.51 871.57 731.71 818.06 700.19 700.98 549.53 561.76 921.47 1104.24 1040.52 1045.11 5189.16 7713.3 11713.33 2058.23 159.36 33.05 254.39 65.22 5.44 25.96 84.24 453.62 159.31 455.97 359.07 334.63 186.46 419.72 162.19 282.21
3.64 4.84 5.51 7.38 10.02 9.17 6.19 4.72 5.23 4.89 5.22 3.69 17.34 36.69 46.91 13.76 1.62 12.72 7.78 0.0 0.0 0.0 4.16 6.24 0.75 2.29 2.94 4.13 0.86 3.2 0.51 0.86
8.03 7.49 7.41 9.63 10.07 9.25 9.51 7.82 7.25 9.79 10.97 8.39 9.11 65.22 38.05 31.25 6.54 6.44 6.53 0.12 0.9 1.36 8.65 8.73 1.75 6.76 6.12 7.17 5.3 6.33 9.4 8.95
1.61 1.56 1.37 1.67 2.38 1.74 1.48 1.54 2.03 1.88 2.94 1.2 6.72 58.37 69.72 16.32 0.15 0.7 0.33 0.0 0.0 0.0 0.49 1.11 0.6 1.08 0.65 1.54 0.44 1.23 0.47 0.64
0.41 0.55 0.44 0.58 0.77 0.98 0.9 0.85 1.08 0.83 0.99 0.66 1.9 6.83 4.78 2.31 0.36 0.52 1.82 0.1 0.24 0.0 0.49 0.93 0.26 0.27 0.85 0.61 0.47 0.51 0.35 0.24
8.36 8.81 9.13 12.26 13.15 10.28 11.15 9.54 9.64 9.18 9.0 8.0 10.97 56.6 33.11 28.84 6.72 4.79 4.71 8.63 3.64 10.24 6.66 7.57 4.73 5.91 7.01 7.81 5.43 6.75 2.98 2.55
3.15 4.92 3.47 5.58 4.15 5.99 2.72 4.08 1.77 4.01 2.86 3.44 21.66 96.43 114.71 34.28 1.65 1.99 0.43 0.0 0.0 0.0 11.19 9.96 3.42 2.31 2.68 5.14 2.61 3.78 2.48 1.53
10.84 13.51 23.96 19.45 16.73 19.2 19.42 12.33 10.93 8.19 7.27 8.17 18.5 73.08 75.97 31.39 4.4 1.76 6.08 6.92 18.59 2.28 17.23 14.27 17.62 5.84 3.08 5.04 2.66 5.11 2.15 2.56
15.82 17.94 17.86 14.7 15.07 16.36 16.5 14.88 18.18 17.71 18.47 15.14 33.54 39.5 71.5 29.17 11.44 7.52 11.42 5.21 6.85 0.25 3.0 5.32 6.06 13.33 8.98 11.04 6.52 9.14 5.2 4.44

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)