Heatmap: Cluster_137 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.22 -0.31 -0.27 -0.06 0.05 -0.08 -0.39 -0.46 -0.12 -0.13 -0.0 -0.38 0.78 2.21 2.39 0.93 -0.09 -1.03 -2.17 -0.98 -2.54 0.09 -2.05 -2.04 -4.06 -0.92 -0.93 -0.47 -0.75 -0.34 -0.97 -1.54
-2.47 -2.81 -2.94 -2.87 -2.29 -4.55 -2.52 -1.72 -2.48 -1.52 -1.56 -1.58 0.73 3.9 3.39 1.04 -7.44 - -5.24 - - - - -3.31 - -4.9 -4.72 -3.78 -6.07 -4.39 -6.01 -5.09
-1.78 -2.5 -1.64 -0.71 -1.33 -1.8 -2.24 -0.69 -2.9 -0.39 -1.1 -1.63 -0.81 3.01 3.55 1.49 -2.73 -4.94 -0.81 -2.51 - - -0.25 -0.03 -3.06 -2.3 -1.68 - -2.3 -1.65 -3.34 -2.04
-2.07 -1.35 -2.84 -0.57 -0.47 -1.37 -1.47 -0.97 -1.52 -1.31 -0.53 -1.58 0.56 3.09 3.25 1.36 -2.91 -3.43 -4.11 - - - -0.21 -0.67 -1.07 -1.28 -1.4 -0.22 -1.92 -1.9 -2.22 -2.9
-0.5 -0.07 -0.39 -0.14 -0.07 -0.31 -1.05 -1.21 -1.1 -0.78 -0.7 -1.04 1.44 2.19 2.49 1.82 -2.04 -2.2 -1.02 -1.33 -1.01 -1.3 -0.73 -0.18 -1.06 -0.87 -0.97 -0.26 -2.08 -1.12 -2.1 -1.48
-1.63 -2.37 -1.67 -1.35 -0.66 -1.35 -2.46 -2.13 -2.25 -2.19 -1.63 -2.36 1.28 3.19 3.68 0.92 -4.36 -8.45 -3.69 - -4.3 - -5.25 -2.67 -2.8 -2.53 -1.84 -1.7 -2.53 -1.32 -3.25 -2.95
-2.57 -2.79 -2.25 -1.15 -1.2 -1.51 -2.26 -2.02 -2.24 -1.76 -2.15 -2.07 1.54 3.23 2.94 1.49 -3.44 -5.88 -3.02 -0.29 -0.37 -2.85 -2.21 -0.91 -0.76 -0.54 -0.42 -0.97 -2.33 -1.77 -3.08 -2.4
0.57 0.36 0.06 0.2 -0.06 -0.01 -1.32 -0.56 -0.17 0.2 0.14 0.28 1.64 2.26 2.67 0.94 -3.3 -2.82 -4.1 - - -5.35 -3.18 -2.12 -2.82 -0.8 -0.63 -0.32 -2.99 -1.86 -2.97 -3.07
-1.67 -2.34 -2.14 -1.18 -1.5 -1.77 -1.78 -1.38 -1.83 -1.02 -1.08 -1.18 1.89 3.07 3.61 1.4 -7.11 -8.9 -7.15 -11.34 - - -7.74 -3.05 -4.39 -2.59 -3.08 -2.14 -5.01 -3.66 -6.85 -4.45
-0.27 -0.08 -0.33 -0.45 -0.31 -0.36 -0.32 -1.14 -1.15 -1.51 -1.03 -1.2 0.56 2.59 1.69 1.38 -0.41 0.06 -0.05 -2.47 -1.75 -1.89 -0.43 0.01 -1.01 -1.54 -0.22 -0.17 -0.5 -0.09 -0.68 -0.54
-0.16 0.07 0.13 0.2 0.05 0.04 0.02 0.05 0.01 -0.04 -0.09 -0.07 0.49 1.73 1.11 0.43 -0.21 -0.28 -0.05 -2.06 -2.12 -3.1 -0.08 -0.08 -0.33 -0.47 -0.05 -0.03 -0.31 -0.18 -0.6 -0.59
-0.27 -0.12 -0.02 -0.12 -0.07 -0.07 -0.42 -0.4 -0.34 -0.39 -0.29 -0.35 0.86 1.97 1.25 0.59 -0.04 -0.09 0.42 -1.7 -2.24 -2.28 0.24 0.21 -0.92 -0.39 -0.13 -0.59 -0.13 -0.16 -0.76 -0.81
-0.43 -1.08 -1.09 -0.91 -0.81 -1.09 -1.24 -0.71 -0.48 0.02 -0.13 -0.54 1.54 2.78 2.88 1.77 -4.04 -4.37 -3.01 -3.74 -5.93 -6.69 -2.75 -1.5 -4.5 0.11 -0.73 -0.28 -3.75 -2.66 -3.72 -2.98
0.28 0.38 -0.44 -0.54 -0.7 -1.04 -1.15 -1.45 -1.09 -0.79 -0.8 -0.63 1.57 2.68 2.89 1.62 -1.47 -3.6 -2.26 - -5.59 - -2.92 -1.55 -2.82 -2.3 -1.32 -2.18 -0.96 -0.9 -1.12 -1.28
-0.97 -0.79 -0.52 -0.04 0.38 -0.17 -0.36 -0.3 -0.09 -0.08 -0.49 -0.99 1.02 2.45 2.32 1.3 -2.28 -3.27 -1.9 -1.79 -0.82 -0.52 -2.22 -1.17 -0.17 -0.7 -0.28 -0.18 -1.45 -1.14 -1.99 -1.6
-0.69 -0.52 -0.81 -0.47 -0.76 -0.58 -0.68 -0.69 -0.43 -0.44 -0.5 -0.6 1.56 2.28 2.78 1.13 -1.77 -2.49 -0.67 -1.17 -3.24 -0.52 -0.97 -0.1 -1.25 -0.49 -1.43 -1.14 -1.37 -1.21 -1.76 -1.82
-2.43 -2.94 -2.19 -0.98 -2.44 -3.17 -2.33 -2.0 -0.26 -1.48 -1.42 -2.48 1.87 3.03 3.37 2.28 -5.78 -1.45 -5.78 - - - - -3.46 -3.72 -3.12 -1.81 -1.96 -3.31 -2.59 - -
-1.82 -1.63 -1.7 -1.17 -0.88 -1.12 -1.68 -1.89 -1.7 -1.32 -1.7 -1.89 0.46 3.0 2.2 0.86 -1.32 0.23 -1.04 0.22 -0.6 0.01 -0.18 -0.18 -1.84 -2.16 -2.23 -2.24 0.06 0.23 0.02 0.25
0.08 0.25 0.07 -0.12 -0.13 -0.28 -0.43 -0.4 -0.29 -0.27 -0.23 -0.11 0.72 2.13 1.13 0.54 -0.53 -0.95 0.18 -2.63 -0.94 -3.4 0.11 0.48 -0.08 -0.22 -0.39 -0.47 -0.68 -0.52 -0.83 -0.56
-3.55 -4.9 -4.43 -2.26 -1.84 -3.59 -4.11 -2.76 -4.82 -3.54 -3.23 -3.48 1.08 3.63 3.48 0.97 -7.52 - 1.43 - - - - -4.81 -5.49 -5.46 -3.44 -2.51 -7.66 -4.82 -7.56 -6.31
-2.87 -3.17 -2.8 -2.12 -2.49 -2.41 -2.29 -2.2 -2.91 -2.15 -2.17 -2.38 1.88 3.81 3.26 0.28 -4.73 -2.58 -3.91 -3.19 -7.37 -3.83 -4.79 -2.7 -3.96 -3.83 -3.28 -2.59 -3.77 -2.76 -5.0 -3.64
-1.51 -0.56 -1.22 -0.39 -0.33 -0.54 0.12 0.27 0.56 -0.4 0.03 -0.23 -4.7 2.77 2.69 -3.45 0.28 -2.48 -2.05 -4.6 -0.67 -2.42 -1.67 -2.45 0.16 -0.93 -0.63 -0.57 -0.44 -0.41 -0.75 -1.12
-2.29 -2.91 -2.1 -1.37 -1.91 -1.35 -1.28 -1.53 -2.07 -2.27 -2.0 -2.8 1.22 3.82 3.21 -0.53 -3.57 -3.18 -3.47 -0.41 - -2.68 -4.94 -2.7 -2.03 -2.6 -2.33 -2.76 -4.55 -2.81 -4.69 -4.4
-1.75 -1.53 -2.37 -0.9 -1.51 -1.11 -1.26 -1.4 -1.02 -1.09 -1.25 -1.22 0.46 2.97 2.42 0.55 -1.04 -3.24 -0.38 0.02 0.15 0.84 -0.39 -0.01 0.34 -1.12 -0.69 -1.02 -1.24 -1.02 -2.13 -2.76
-0.54 -0.33 -0.54 -0.09 0.3 -0.57 0.25 -0.78 -0.41 -0.05 0.12 0.07 1.4 2.37 2.33 1.07 -0.94 -2.18 -3.54 -1.45 -3.83 -0.51 -2.77 -1.59 -2.37 0.32 -0.8 -0.51 -1.8 -1.39 -2.03 -1.69
-0.75 -0.47 -0.37 -0.16 -0.32 -0.24 -0.47 -0.33 -0.61 -0.42 -0.86 -0.65 0.39 2.79 1.73 1.09 -0.74 -1.53 -0.28 0.62 -2.37 -0.19 -0.64 -0.65 -2.51 -1.61 -1.32 -0.91 -0.79 -0.71 -0.55 -0.7
-1.87 -2.38 -2.49 -1.84 -0.83 -2.52 -2.06 -1.46 -1.04 -2.55 -2.87 -1.62 -0.36 3.1 2.47 -0.17 -1.97 - -1.24 0.35 1.04 0.84 -1.1 -1.41 1.44 -0.12 -0.28 -0.35 -1.88 -2.09 -1.95 -2.45
-0.6 -0.19 -0.3 -0.15 -0.34 -0.52 -0.33 -0.44 -0.42 -0.41 -0.37 -0.44 0.68 2.64 2.62 1.12 -1.29 -1.49 -1.54 -3.46 -0.97 -3.28 -0.96 -0.16 -0.68 -1.49 -1.04 -1.74 -1.51 -0.85 -1.95 -1.31
-1.02 -0.89 -0.95 0.23 0.06 -0.13 0.08 -1.34 -0.55 0.12 -0.48 -0.1 -1.66 2.76 3.02 1.24 -1.92 -0.42 -3.58 - - -1.27 -2.8 -1.96 -1.09 -1.16 -1.9 -0.56 -2.58 -0.99 -3.6 -1.46
-1.01 -1.87 -3.63 -0.59 -1.28 0.64 -1.31 -1.07 -1.18 -1.25 -2.44 -0.47 1.59 2.76 3.13 1.94 - - -1.75 - - - -2.95 -2.09 0.1 -0.86 - 0.06 - -2.83 - -
-2.55 -1.82 -4.04 -1.89 -0.69 -3.72 - -2.37 -1.15 -2.87 -3.54 -1.75 -0.46 3.25 3.62 0.74 - -2.94 2.28 - - - - -3.52 - - - - -3.73 - - -
-1.98 -2.22 -2.74 -1.75 -1.53 -1.95 -1.32 -1.61 -2.12 -1.04 -1.15 -1.57 1.6 3.19 3.5 1.79 -5.42 -5.86 -2.47 - -6.2 - -6.73 -2.47 -6.44 -2.61 -3.06 -2.68 -3.71 -2.61 -4.49 -3.21
-1.55 -1.42 -1.03 -0.16 -1.05 -1.5 -1.13 -1.17 -1.34 -0.31 -0.81 -1.36 0.83 3.12 2.84 2.72 -5.35 -4.98 -4.01 - - - -5.3 -2.37 - -2.55 -3.49 -1.25 -2.63 -1.77 -3.6 -2.27
-1.46 -1.36 -1.5 -1.21 -0.98 -1.44 -1.23 -1.2 -1.69 -1.33 -0.67 -1.2 0.35 3.43 3.01 1.67 -2.17 -1.75 -1.36 -3.09 - - -2.17 -1.48 -3.27 -1.57 -1.73 -1.27 -2.06 -1.71 -2.67 -2.44
-1.29 -2.06 -0.72 -0.73 -1.35 -1.38 -1.15 -1.79 -1.14 -0.6 -0.29 -1.29 1.34 2.81 3.06 1.89 -3.37 0.54 -0.28 -2.85 - - -4.6 -1.87 -1.75 -1.07 -1.44 -1.32 -3.47 -3.32 -4.37 -3.96
-1.71 -5.99 -5.26 -2.05 -2.2 -1.06 -6.37 -1.73 -4.19 -2.26 -3.02 -2.86 -0.02 3.59 3.48 2.29 - - -7.16 - - - - -1.82 -3.94 -3.28 -4.3 - -4.99 -2.81 -4.55 -4.34
-1.66 -6.19 -7.42 -2.91 -2.64 -0.34 -3.28 -2.33 -7.27 -2.08 -1.1 -2.02 0.72 3.67 3.41 1.78 -5.41 - -5.16 - - - -6.26 -2.44 - -1.88 - - -5.34 -2.15 -4.25 -4.43
-2.46 -2.42 -3.0 -1.33 -2.06 -2.54 -1.86 -2.05 -2.0 -1.31 -2.05 -2.05 -0.38 3.53 3.46 0.58 -3.55 -2.92 1.14 -2.85 -2.4 - -3.11 -2.81 -3.29 -2.54 -2.35 -1.29 -3.15 -3.04 -3.86 -4.57
-1.14 - -3.56 -0.87 - -3.29 -0.96 -3.59 -3.58 -1.21 -0.27 -0.74 1.06 3.71 3.07 1.03 - - 0.45 - - - - -3.31 - - - -0.96 - -0.9 - -3.32
-1.48 -2.14 -2.93 -0.8 -1.44 -1.46 -0.67 -0.77 -0.69 -0.35 -0.86 -0.78 0.83 3.2 2.77 2.01 -3.74 -3.22 -2.98 - - - 0.03 -0.13 -2.38 -1.43 -2.46 -0.67 -2.13 -1.95 -3.54 -2.41
-2.72 -3.08 -5.22 -3.88 -4.35 -0.98 -4.45 -2.52 -3.72 -1.79 -2.33 -3.15 1.17 3.27 3.68 2.25 -7.67 - -4.64 - - - - -2.41 - -4.7 -3.17 - -4.39 -2.27 -5.04 -3.85
-0.76 -0.77 -0.9 -0.85 -0.87 -0.91 -1.08 -1.09 -1.25 -0.99 -0.97 -1.33 1.03 3.08 2.63 2.04 -2.46 -1.51 -0.56 - - - -2.15 -1.94 0.13 -1.11 -1.16 -0.82 -2.1 -1.67 -2.71 -2.81
-1.56 -1.95 -1.66 -1.29 -0.91 -1.02 -1.66 -1.09 -0.49 -1.06 -0.47 -1.24 1.41 3.08 2.16 1.59 -1.1 -0.7 0.8 -3.41 -6.44 -6.22 -1.35 -1.8 -1.7 -0.74 -0.78 -0.63 -1.43 -1.08 -0.51 -0.61
-1.9 -1.9 -2.65 -1.2 -1.43 -1.21 -1.75 -2.23 -2.13 -1.48 -1.45 -1.53 1.82 3.06 3.55 1.55 -2.69 -4.47 -2.38 -8.12 - - -4.21 -2.4 -1.68 -5.2 -3.99 -3.08 -2.69 -2.17 -3.55 -3.02
-0.46 -0.09 -0.1 0.1 -0.02 0.18 -0.02 -0.29 -0.09 -0.12 -0.07 -0.35 0.21 1.95 2.48 0.29 -0.45 -0.39 -1.34 -0.44 -1.67 0.23 -1.34 -1.03 -0.62 -1.67 -1.18 -0.75 -1.02 -0.74 -1.09 -1.29
-0.14 0.14 -0.04 -0.31 -0.41 -0.09 -0.56 -0.13 -0.24 -0.29 -0.11 -0.43 -2.71 3.3 2.4 0.32 -2.24 -9.69 -0.39 -5.59 -2.57 -9.62 -1.77 -2.04 -0.76 -0.36 -1.48 -2.57 -1.6 -1.48 -1.44 -1.31
-2.05 -2.42 -2.7 -1.77 -1.82 -1.8 -1.89 -1.64 -1.89 -1.43 -1.46 -1.63 2.15 2.76 3.82 0.87 -7.93 -11.43 -6.9 -7.84 - -9.99 -7.09 -3.16 -1.34 -3.32 -3.13 -2.01 -4.53 -2.18 -6.2 -2.17
-0.92 -0.98 -0.74 -0.9 -0.72 -1.01 -2.03 -1.61 -1.38 -0.98 -0.52 -0.93 0.46 2.73 2.71 1.87 -1.97 -0.93 0.16 -0.64 -2.36 - -1.35 -1.15 -1.76 0.55 -1.05 -1.34 -1.24 -1.16 -1.4 -1.43
-0.4 -0.27 -0.19 -0.12 -0.05 0.14 -0.0 -0.13 -0.18 -0.24 -0.37 -0.35 0.07 1.38 1.41 0.68 -0.23 -0.52 -0.17 -1.28 -0.3 -0.25 -0.03 -0.1 -0.02 -0.52 -0.13 -0.0 -0.2 -0.17 -0.31 -0.22
-0.36 -0.1 0.06 0.15 0.09 0.25 0.34 -0.29 -0.05 -0.38 -0.36 -0.3 0.62 2.35 2.0 0.72 -0.24 -0.41 -0.41 -1.53 -0.77 -1.94 -0.94 -0.71 -3.0 -1.39 -1.31 -0.73 -0.46 -0.46 -1.66 -2.15
-0.43 -0.52 -0.78 -0.61 -0.84 -0.84 -1.19 -1.16 -0.44 -0.18 -0.27 -0.26 2.05 2.62 3.22 0.72 -2.97 -5.24 -2.3 -4.26 -7.85 -5.59 -3.89 -1.47 -2.98 -1.46 -1.8 -1.9 -2.75 -1.58 -2.95 -2.15
-1.0 -0.59 -0.4 0.02 0.46 0.33 -0.24 -0.63 -0.48 -0.58 -0.48 -0.98 1.25 2.33 2.69 0.92 -2.17 0.8 0.09 - - - -0.81 -0.22 -3.28 -1.67 -1.31 -0.82 -3.08 -1.19 -3.84 -3.08
-0.41 -0.51 -0.52 -0.14 -0.08 -0.2 -0.16 -0.44 -0.55 -0.12 0.04 -0.34 -0.22 2.62 1.84 1.56 -0.7 -0.72 -0.7 -6.5 -3.57 -2.97 -0.3 -0.28 -2.6 -0.65 -0.8 -0.57 -1.0 -0.75 -0.18 -0.25
-1.82 -1.86 -2.05 -1.77 -1.25 -1.71 -1.94 -1.88 -1.48 -1.6 -0.95 -2.25 0.24 3.36 3.62 1.52 -5.21 -3.03 -4.12 - - - -3.55 -2.36 -3.25 -2.4 -3.14 -1.88 -3.7 -2.21 -3.58 -3.14
-1.33 -0.9 -1.22 -0.83 -0.41 -0.07 -0.19 -0.27 0.07 -0.3 -0.05 -0.63 0.89 2.73 2.22 1.17 -1.51 -0.97 0.82 -3.38 -2.07 - -1.08 -0.15 -2.01 -1.91 -0.27 -0.76 -1.13 -1.02 -1.56 -2.1
-0.36 -0.29 -0.24 0.19 0.29 -0.07 0.05 -0.17 -0.16 -0.23 -0.26 -0.43 0.03 2.4 1.62 1.42 -0.68 -1.17 -1.19 -0.32 -1.56 -0.07 -0.69 -0.51 -1.19 -0.86 -0.62 -0.46 -0.99 -0.67 -1.85 -2.08
-1.85 -1.2 -1.71 -1.02 -1.45 -0.92 -2.06 -1.47 -2.68 -1.5 -1.99 -1.72 0.94 3.09 3.34 1.6 -2.78 -2.51 -4.71 - - - -0.02 -0.19 -1.73 -2.3 -2.08 -1.14 -2.12 -1.58 -2.19 -2.89
-0.48 -0.16 0.66 0.36 0.14 0.34 0.36 -0.3 -0.47 -0.89 -1.06 -0.89 0.29 2.27 2.33 1.05 -1.78 -3.1 -1.32 -1.13 0.3 -2.73 0.19 -0.09 0.22 -1.37 -2.3 -1.59 -2.51 -1.57 -2.82 -2.56
0.05 0.23 0.23 -0.05 -0.02 0.1 0.11 -0.04 0.25 0.22 0.28 -0.01 1.14 1.37 2.23 0.94 -0.41 -1.02 -0.42 -1.55 -1.15 -5.93 -2.35 -1.52 -1.33 -0.19 -0.76 -0.47 -1.23 -0.74 -1.55 -1.78

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.