Heatmap: Cluster_280 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.02 0.01 -0.01 0.09 0.27 0.06 0.38 0.31 0.56 0.63 0.71 0.2 0.01 -0.46 0.26 0.4 -0.28 -0.71 0.21 -0.56 -1.11 -1.5 0.15 0.27 -1.75 0.41 -0.22 -0.35 -0.03 -0.1 -0.3 -0.46
-0.24 -0.13 -0.75 0.17 -0.23 0.1 0.65 0.74 0.82 0.54 0.93 0.17 -0.09 -0.98 0.31 0.9 -0.64 -1.51 0.81 -2.86 -1.51 -5.2 0.24 0.15 -0.72 1.12 -0.62 -1.2 -0.42 -0.41 -0.46 -0.15

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.