Heatmap: Cluster_20 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.88 -0.86 -1.31 -0.52 -0.36 -0.62 -0.31 0.69 0.11 0.96 -0.42 -0.21 -1.86 -1.42 -1.79 -0.25 -1.89 -2.62 2.82 1.89 -2.15 -4.48 -1.97 -1.59 -0.46 1.31 0.68 0.18 -1.32 -1.08 -1.94 -1.2
-0.11 -0.21 -0.16 -0.06 -0.2 0.15 0.19 -0.72 -0.0 -0.41 -0.28 -0.78 -1.56 -3.16 1.45 -1.25 1.5 0.36 -0.77 2.21 -1.55 1.41 -1.36 -1.68 -1.35 -3.21 -1.74 -0.92 0.5 0.51 -1.3 -1.82
-0.83 -0.99 -0.73 -1.11 -1.19 -0.77 -0.38 -0.47 -0.3 -0.22 -0.37 -0.6 -0.9 -1.05 -1.86 -0.16 -0.42 -0.57 0.21 2.13 1.67 -2.34 -0.23 -0.21 1.23 -0.21 -0.05 0.11 0.23 0.21 0.21 0.34
-0.96 -1.56 -1.33 -0.86 -1.09 0.31 0.71 0.78 0.46 0.06 0.36 -0.88 -2.31 -2.88 -0.81 -1.88 -1.02 -1.09 -0.97 2.15 2.18 -0.21 -1.33 -1.39 1.16 -0.92 -0.03 0.12 -0.64 -0.52 -0.3 -0.7
- - - - - - - - - - - - 2.48 - -1.39 1.0 0.49 - 1.69 2.41 2.72 - -0.23 0.53 1.38 - - - -0.16 -0.61 -0.61 -1.26
- - - - - - - - - - - - 2.48 - -1.39 1.0 0.49 - 1.69 2.41 2.72 - -0.23 0.53 1.38 - - - -0.16 -0.61 -0.61 -1.26
0.2 0.18 0.36 0.55 0.36 0.48 0.59 0.66 0.75 0.47 0.4 0.35 -4.57 -0.82 -1.11 -1.91 -0.08 -0.79 -1.09 1.61 -1.0 -0.38 -2.06 -2.44 -1.16 0.36 0.52 0.57 -0.55 -0.28 -0.37 -0.94
-1.22 -1.18 -2.22 -0.67 -0.15 1.19 1.18 1.42 1.5 0.89 0.05 -0.68 -4.16 -3.56 -2.05 -3.05 -1.24 -1.29 -1.9 2.31 -4.0 -4.34 -1.84 -1.79 0.8 -1.03 1.14 0.74 -0.73 -0.67 -0.41 -0.96
-0.43 0.12 -0.69 -0.35 -0.32 -0.13 0.17 -0.04 -0.19 -0.34 -0.23 -0.3 -1.16 -0.58 0.17 -0.69 -0.93 -1.0 -0.58 1.96 1.71 1.23 -0.63 -0.94 1.13 -0.98 -0.54 -0.67 -0.81 -0.55 -0.83 -0.81
-0.94 -0.17 -1.25 -0.86 -0.86 -0.48 -1.1 -1.05 -0.79 -0.31 -1.71 -0.4 -1.39 -3.13 -2.75 -1.28 -1.24 -1.21 -1.05 3.44 2.5 -0.46 -0.86 -0.71 1.26 -1.73 -1.59 - -1.63 -2.02 -2.01 -1.73
0.59 0.51 0.73 0.3 0.59 0.63 -0.06 0.25 0.31 0.48 0.27 0.25 -3.47 -1.43 -2.34 -0.54 -0.87 -0.69 -1.0 1.76 0.78 -3.93 -1.06 -0.15 1.06 -1.22 -0.82 -0.45 -0.38 -0.59 -0.61 -0.98
-0.68 -0.3 -0.15 -0.22 0.21 -0.0 -0.24 -0.22 -0.39 -0.56 -0.7 -0.95 0.19 -0.09 -1.48 0.28 -0.26 -0.65 0.32 0.75 0.18 -0.3 0.67 0.85 0.55 0.52 0.24 0.35 -0.13 -0.07 -0.08 -0.29
-0.23 0.0 0.17 0.25 0.33 0.29 0.52 0.51 0.47 0.4 0.3 0.13 -0.91 -1.4 0.14 -0.96 -0.57 -1.13 -0.31 1.02 0.25 -1.82 -0.49 -0.55 -0.24 0.11 0.41 0.34 -0.44 -0.29 -0.08 0.1
-0.56 -0.45 -0.47 -0.2 0.18 -0.42 -0.79 -0.43 -0.22 -0.46 -0.18 -0.25 0.56 0.03 -0.67 0.58 -0.73 -0.03 0.16 1.1 0.6 0.29 0.28 0.51 0.47 0.29 0.16 0.12 -0.1 -0.46 -0.72 -0.81
0.25 -0.32 -0.45 -0.38 -0.3 -0.47 -0.14 0.47 0.45 0.64 0.75 1.0 -2.06 -2.19 -2.17 -1.1 -1.48 -1.73 2.27 1.59 -0.37 -2.31 -1.07 -0.76 -2.48 1.23 0.18 0.22 -0.92 -0.77 -2.2 -2.19
-0.42 -0.78 -0.65 -0.06 -0.31 -0.34 0.18 0.94 0.73 0.82 0.4 -0.05 -2.63 -2.89 -2.23 -1.55 -1.84 -1.66 1.41 1.64 0.65 -3.06 -1.89 -1.68 0.17 1.53 0.08 -0.87 -0.75 -1.15 0.05 0.61
0.87 0.06 -0.89 -0.81 -1.54 -1.32 -1.4 -1.67 -1.7 -1.37 -1.13 -0.12 -0.04 -0.05 0.72 0.52 0.01 0.34 1.53 1.59 1.32 0.0 -0.02 0.33 0.34 0.21 -0.84 -1.22 -0.83 -0.79 -1.0 -0.91
-0.61 -0.55 -0.54 -0.52 -0.73 -0.25 -0.45 -0.54 -0.2 -0.25 -0.28 -0.43 -0.03 -0.12 0.05 0.23 -0.54 -0.69 -0.12 1.48 1.53 1.2 -0.69 -0.21 0.52 0.49 -0.13 0.01 -0.55 -0.6 -0.72 -0.64
0.15 -0.34 -0.79 -0.54 -0.39 -0.17 0.03 0.67 1.07 0.6 0.82 0.77 -2.34 -1.95 -1.46 -1.38 -1.3 -1.18 -1.12 2.16 -1.6 -2.54 -1.16 -1.11 1.05 0.54 -0.08 0.35 -0.34 -0.1 -0.17 -0.45
-1.23 -0.89 -0.01 -0.46 -0.28 0.05 -0.24 -0.53 -0.46 -0.21 -1.36 -1.39 -2.55 -3.4 2.2 -2.26 -0.71 -0.18 -1.65 3.1 2.02 0.6 -3.22 -6.42 -1.62 -2.72 -0.96 -0.63 -1.75 -1.51 -3.74 -4.29
- - - 0.25 - 0.37 - 1.87 - 2.43 - - 0.68 1.75 - -0.38 0.28 - 2.47 2.42 - - -1.16 - - - 1.14 - - - - -
-1.13 -1.19 -3.24 -0.09 -0.35 -2.25 -1.66 -2.55 0.32 -1.32 -1.21 -0.66 - - - -2.65 -3.8 - 2.2 3.6 2.81 -0.65 - - - -0.19 -2.42 - -2.94 - -3.83 -
-1.8 -1.73 -2.02 -1.59 -1.43 -1.42 -2.21 -1.77 -2.33 -1.55 -2.0 -1.42 0.57 -0.55 -0.55 1.16 0.71 1.27 0.54 2.31 1.18 -3.3 0.98 0.84 0.19 -3.19 -1.69 -1.04 0.4 0.29 -0.0 0.2
-0.27 -0.36 -0.03 0.11 0.29 0.2 0.07 0.47 0.42 0.4 0.36 -0.06 0.06 -1.27 -2.01 -0.3 -0.51 -0.98 -0.38 1.27 0.21 -1.73 -0.33 -0.41 0.57 0.92 0.48 0.48 -0.33 -0.41 -1.1 -0.92
0.79 -0.21 0.59 0.12 -1.64 0.06 -1.51 0.18 0.12 -0.83 0.08 0.13 -3.96 1.26 2.01 -2.96 -4.0 -2.33 -4.13 2.85 1.82 -0.99 - -4.19 -2.12 -1.11 -1.96 -0.36 -2.59 - - -
-1.04 -0.55 -0.66 -0.69 -0.02 -0.11 -0.15 -0.5 -0.42 -0.38 -0.68 -0.84 -0.7 -1.33 1.51 -0.52 -0.84 -1.29 0.35 2.26 1.52 0.59 -1.0 -1.21 0.22 -0.25 -0.02 0.22 -0.64 -0.4 -1.4 -0.93
-0.67 -0.15 -0.28 -0.53 -0.58 -0.41 -0.31 -0.24 0.19 0.34 -0.02 0.06 0.06 -0.01 -0.46 -0.12 -0.73 -0.2 0.11 1.06 1.26 0.13 -0.23 -0.09 1.35 -0.12 -1.04 -1.26 -0.57 -0.46 -0.12 0.2
-0.26 -0.0 0.16 0.08 0.19 0.26 0.54 0.45 0.45 0.5 0.42 0.19 -1.14 -0.81 -0.16 -1.11 -0.17 -0.49 -0.88 1.3 0.13 -0.05 -0.62 -0.73 -0.12 -0.44 0.36 0.61 -0.27 -0.36 -0.85 -0.65
-0.06 -0.18 -0.36 -0.27 -0.62 0.01 -0.2 0.15 -0.04 -0.14 -0.11 -0.36 -0.25 0.41 0.71 0.08 -0.98 -1.02 -0.16 1.13 1.21 0.26 -0.56 -0.38 0.3 -0.02 0.32 -0.16 -0.74 -0.56 -0.18 -0.12
0.01 0.19 -0.18 0.01 0.37 0.27 0.37 0.13 0.29 0.58 0.18 0.16 -0.46 -0.55 0.15 -0.14 -0.98 -0.65 -0.2 1.01 0.68 1.11 -0.56 -0.76 -0.54 -0.44 -0.25 -0.3 -0.82 -0.72 -0.49 -0.56
0.2 -0.04 0.05 -0.01 -0.1 -0.13 -0.11 0.18 0.24 0.37 0.35 0.18 0.29 -0.19 -0.46 0.26 -0.27 -0.42 -0.09 0.91 0.56 0.58 -0.21 -0.17 -0.92 -0.29 -0.91 -0.72 -0.22 -0.27 -0.21 -0.17
0.05 0.47 0.07 0.06 0.17 0.08 0.4 -0.0 0.23 0.08 -0.12 -0.1 0.11 -1.1 -0.3 0.31 -0.17 -0.02 -0.17 0.6 1.03 -2.0 -0.26 -0.1 0.45 -0.93 -0.53 -0.45 -0.02 -0.05 -0.26 -0.22
-1.64 -1.22 -1.41 -1.24 -0.94 -0.47 -0.49 -0.88 -1.31 -1.29 -1.46 -2.03 -1.11 -1.84 0.78 -1.28 -1.39 -1.25 -1.18 2.51 2.56 2.12 -1.24 -1.13 1.23 -2.05 -0.17 -0.17 -1.73 -1.27 -2.04 -2.09
-0.56 -0.28 -0.43 -0.36 -0.57 -0.14 -0.4 -0.48 -0.44 -0.76 -0.64 -0.81 -1.36 -1.08 -0.79 -1.24 -0.21 -0.11 -0.4 2.55 0.9 0.03 -0.4 -0.18 1.81 -1.3 -0.95 -1.22 -0.63 -0.45 0.14 0.32
-1.67 -2.05 -1.59 -1.48 -0.89 -1.22 -0.46 -1.27 -1.42 -0.71 -1.21 -1.44 -0.19 -0.28 -0.53 0.07 -0.25 0.23 1.13 1.78 1.54 1.57 0.32 -0.11 1.13 -1.76 -1.15 -1.04 -0.08 -0.31 0.35 0.34
-0.52 -0.96 -0.95 -1.05 -0.87 -0.07 -0.13 -0.15 0.44 0.03 -0.73 -0.48 -0.85 -0.14 -0.12 -0.33 -1.61 -0.64 0.21 1.36 1.13 1.01 -0.3 -0.19 1.19 -0.07 -0.07 0.12 -0.37 0.18 -0.1 -0.16
0.69 0.67 0.05 0.29 0.72 0.55 0.86 0.74 0.95 0.87 0.44 0.69 -5.23 -1.54 -0.21 -3.95 -4.9 -4.14 -3.03 2.06 1.96 -6.19 -4.86 -4.55 -1.69 0.14 -0.17 0.11 -3.53 -4.57 -6.95 -5.12
-1.35 -1.8 -1.9 -1.27 -2.65 -0.61 -1.28 -2.44 -1.23 -0.51 -1.9 -1.39 -1.73 -1.8 -2.21 -1.38 -1.55 -2.36 2.2 2.53 1.3 2.73 -1.83 -1.1 0.49 -1.21 -1.44 -1.66 -1.01 -1.06 -0.24 0.22
- -0.66 - 0.36 - -0.41 -15.81 1.61 - - 2.03 - - - - - - - -1.66 3.6 3.16 -0.31 - - -3.43 - - - - - - -
-0.76 -0.02 -0.09 0.07 0.13 0.05 0.32 0.39 0.28 0.23 0.13 0.03 -0.45 -0.54 -0.25 -0.32 -0.25 -0.69 0.33 0.91 -0.84 -0.77 -0.22 -0.3 0.66 0.75 0.16 -0.11 -0.08 -0.24 -0.35 -0.18
-0.22 -0.04 -0.1 -0.05 0.07 -0.22 0.09 0.37 0.47 0.74 0.39 0.32 0.16 -0.77 -1.24 0.15 -0.94 -0.68 -0.37 1.22 0.65 0.8 -0.36 -0.2 0.22 -0.78 -0.82 -0.81 -0.33 -0.24 -0.49 -0.49
-0.36 -0.31 0.16 0.19 -0.02 0.19 0.08 0.07 0.04 0.34 0.19 -0.01 -0.27 -0.5 -0.01 0.1 -0.5 -0.97 -0.1 0.54 0.76 0.11 -0.38 -0.21 0.32 0.36 0.19 0.26 -0.35 -0.32 -0.71 -0.29
-0.54 -1.62 -1.5 -0.55 0.34 0.75 0.59 1.0 0.46 0.13 -0.04 -0.7 -2.89 -2.98 -0.57 -1.64 -0.34 0.08 -1.61 2.34 1.0 -0.56 -1.22 -1.18 -1.0 -1.56 1.27 1.08 -0.69 -0.83 -0.98 -1.49
-1.16 -2.1 -2.2 -1.56 -1.54 -2.06 -2.15 -1.95 -1.57 -1.38 -1.7 -1.31 0.36 0.57 -0.44 1.39 -0.73 0.45 0.58 1.79 1.31 0.87 0.56 1.48 1.16 -1.44 -2.35 -2.11 0.03 0.19 -0.7 -0.27
-1.6 -1.48 -1.91 -1.54 -1.25 -1.02 -1.08 -0.81 -1.16 -1.02 -0.67 -1.01 0.04 -1.11 -1.25 0.19 -0.43 -0.1 0.07 1.72 0.87 1.91 -0.36 -0.37 0.97 -0.4 0.0 0.03 -0.08 -0.19 1.04 0.89
0.81 -0.48 -0.64 -1.09 -0.97 -1.08 -0.77 -0.76 -0.97 -0.15 0.01 0.44 -0.63 1.06 -0.85 0.51 -0.75 0.51 0.88 1.08 1.52 -0.03 -0.86 -0.66 -0.89 -1.19 -0.77 -1.03 -0.01 0.08 0.48 0.34
-0.15 -0.02 0.1 -0.14 -0.12 0.07 -0.27 -0.22 -0.0 -0.06 -0.18 -0.17 -0.24 0.54 0.73 -0.1 -0.9 -0.33 -0.56 2.06 0.97 1.29 -0.91 -0.83 -0.35 -1.54 -1.41 -1.36 -0.8 -1.0 -0.87 -0.58
0.01 -0.18 -0.06 -0.92 -0.28 -1.1 -1.13 -1.82 -1.23 -1.08 0.0 -0.1 -2.72 0.37 1.87 -1.05 0.04 0.95 1.35 2.31 0.34 0.7 -2.14 -1.62 -1.55 -0.91 -0.67 -0.93 -0.17 -0.39 -2.26 -1.44
-0.29 -0.13 -0.38 -0.46 -0.43 -0.37 -0.57 -0.71 -0.75 -0.81 -0.53 -0.73 0.27 -0.15 -1.43 0.6 -0.31 0.72 0.3 1.51 1.37 -1.17 0.78 0.7 0.89 -1.52 -1.58 -1.35 -0.2 -0.34 -0.04 0.09
-1.32 -1.31 -1.96 -1.7 -1.32 -1.19 -1.34 -1.5 -1.5 -1.21 -0.81 -0.9 -1.38 -2.37 0.15 -1.57 -1.07 -0.33 -0.59 2.5 3.31 0.74 -1.26 -1.74 1.01 -1.11 -2.36 -2.59 -0.28 -0.71 -0.97 -1.16
-1.32 -1.31 -1.96 -1.7 -1.32 -1.19 -1.34 -1.5 -1.5 -1.21 -0.81 -0.9 -1.38 -2.37 0.15 -1.57 -1.07 -0.33 -0.59 2.5 3.31 0.74 -1.26 -1.74 1.01 -1.11 -2.36 -2.59 -0.28 -0.71 -0.97 -1.16
-0.49 -0.21 -0.27 -0.3 -0.19 -0.11 -0.32 0.09 -0.58 -0.31 -0.32 -0.5 0.01 -0.21 0.25 0.07 -0.97 -0.95 0.22 1.67 0.51 1.41 -0.31 -0.18 0.46 0.26 -0.04 0.07 -0.85 -0.57 -0.84 -1.0
-0.04 -0.04 -0.17 -0.12 -0.27 -0.13 -0.17 0.0 -0.1 -0.04 -0.0 -0.14 -0.05 -0.32 -0.29 0.23 -1.12 -0.97 0.18 1.69 0.07 1.48 -0.58 -0.37 0.03 0.01 -0.01 0.18 -0.68 -0.68 -0.95 -0.97
0.16 0.24 0.4 0.25 0.27 0.47 0.33 0.29 0.42 0.32 0.36 0.19 -0.67 -1.33 -0.91 -0.39 -0.63 -0.63 -0.47 0.96 1.22 0.27 -0.54 -0.53 -0.01 -0.43 -0.64 -0.41 -0.52 -0.44 -0.5 -0.61
-0.38 -0.69 -1.26 -0.77 0.39 0.69 1.01 1.15 1.0 0.72 0.18 -0.2 -2.06 -2.09 -0.16 -1.43 -0.41 -1.55 -0.63 1.54 0.62 0.32 -0.89 -1.14 -1.52 -0.92 0.65 0.46 -0.1 0.01 -0.75 -1.8
0.07 0.15 -0.01 0.09 0.01 0.05 0.04 0.09 0.09 0.34 0.1 0.12 0.2 0.26 0.2 0.09 -0.69 -0.59 -0.09 0.85 1.21 -0.62 -0.28 -0.2 0.57 -1.15 -1.3 -1.37 -0.55 -0.49 -0.26 -0.06
-0.33 -0.57 -0.82 -0.4 -0.02 0.93 1.06 0.9 0.53 0.2 0.18 -0.47 -2.39 -2.39 0.52 -1.63 -0.74 -0.66 -0.53 1.75 -1.57 -1.43 -0.56 -0.91 -0.1 -0.32 0.91 0.85 -0.3 -0.3 -0.26 -0.51
-1.48 -0.91 -2.04 -0.93 -0.43 -1.61 -0.72 -1.22 -2.41 -0.64 -1.4 -2.18 -0.99 -1.76 1.8 -0.86 -1.18 -0.15 2.22 2.83 -3.48 2.5 -2.24 -1.49 -0.02 -2.12 -2.4 - -1.05 -2.01 -1.68 -3.33

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.