Heatmap: Cluster_172 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.94 -0.57 -0.61 -0.98 0.01 -0.75 -1.18 -0.92 0.04 -1.3 -0.82 -0.79 0.17 1.27 0.62 1.92 -1.57 -0.83 0.99 0.27 - - -0.16 -0.14 -0.38 0.08 0.25 -0.87 -0.47 -0.11 1.34 1.0
-0.67 -0.99 -1.0 -0.5 -0.22 -0.38 -0.15 0.08 0.29 0.12 0.03 -0.34 0.49 1.26 -0.23 0.85 -0.97 -1.04 0.12 -0.44 -1.0 -0.8 -0.12 0.0 0.86 -0.31 0.44 -0.27 -0.22 -0.22 0.77 0.54
-0.39 -0.57 -0.53 -0.05 -0.24 -0.13 -0.38 -0.11 -0.01 -0.03 -0.02 -0.11 1.16 0.73 0.58 1.59 -0.77 -0.4 -0.67 -0.72 -1.6 -0.74 0.61 1.08 0.17 0.12 -0.41 -0.15 -0.87 -0.42 -1.14 -1.31
-0.28 0.01 -0.2 -0.21 -0.06 -0.1 -0.43 -0.5 -0.42 -0.4 -0.46 -0.63 1.52 0.69 0.87 1.59 -0.97 -0.88 -0.33 -0.38 -2.12 -0.34 0.45 0.45 0.71 -0.12 -0.24 0.01 -0.59 -0.32 -1.69 -1.52
0.09 -0.17 -0.2 -0.18 -0.09 -0.08 -0.33 0.01 0.07 0.18 0.19 0.02 1.09 0.95 -0.23 1.17 -0.78 -0.21 0.38 -2.12 -2.04 -2.4 0.12 0.32 -1.32 0.36 -0.06 -0.17 -0.25 -0.16 -0.01 0.13
-0.37 -0.18 -0.35 -0.13 -0.23 0.1 0.0 0.33 0.11 0.17 0.09 -0.12 1.79 1.11 -0.5 1.18 -0.32 -0.75 -0.03 -1.61 -3.21 -3.17 -0.18 -0.03 -2.24 0.08 0.03 0.22 -0.04 0.15 -0.79 -0.38
-1.63 -1.07 -0.66 -0.98 -0.28 0.48 -1.25 0.39 0.68 0.04 -1.7 -1.18 2.24 -0.45 -0.54 1.94 -1.64 -1.6 -1.13 - - - 0.76 2.17 -1.97 -0.1 -1.51 0.27 -0.2 0.35 -1.28 -2.74
-0.24 -0.88 -0.51 -0.66 -0.34 -0.49 -1.23 -0.84 -0.53 -0.78 -0.91 -1.15 0.6 0.63 0.14 1.25 0.25 -0.03 0.59 -7.98 -5.88 -1.51 1.34 1.97 0.24 -1.15 -0.69 -0.62 0.17 0.56 0.12 -0.16
-0.29 0.21 -0.97 -0.12 -0.34 0.09 -0.34 -0.68 -0.09 -0.18 -0.45 -0.57 0.99 0.37 0.93 1.14 0.16 -0.53 0.96 - - - 0.99 1.26 -2.24 -0.22 -0.53 -0.91 0.31 0.32 -0.26 -0.06
-0.24 -0.32 -0.34 -0.31 -0.27 -0.27 -0.39 -0.38 -0.0 -0.08 -0.04 -0.19 0.77 1.44 0.85 0.88 -0.83 -0.63 0.54 -2.64 -2.16 -1.32 0.75 1.09 -1.65 -0.17 -0.77 -0.91 -0.38 -0.03 0.37 0.14
-0.41 -0.48 -0.37 -0.46 0.11 -0.17 -0.26 -0.18 0.12 -0.3 -0.19 -0.45 1.32 1.26 0.48 1.8 -1.07 -1.11 0.83 -5.3 -0.38 -1.2 0.12 0.57 0.4 0.17 -0.85 -1.47 -0.65 -0.39 -1.09 -1.59
-0.48 -0.32 -0.26 -0.19 -0.11 -0.17 -0.26 -0.12 -0.18 -0.27 -0.18 -0.38 0.74 0.28 0.88 0.65 -0.23 -0.35 0.25 -0.87 -0.48 -0.63 0.37 0.44 -0.18 0.33 0.04 0.02 -0.03 0.04 0.02 -0.06
-0.93 -0.91 -0.83 -0.82 -0.58 -0.75 -0.96 -0.92 -0.62 -0.66 -0.71 -0.95 1.12 0.91 0.54 1.28 -0.45 -0.51 0.81 -1.64 -1.51 -1.87 0.89 1.63 0.24 0.42 -0.14 -0.19 -0.1 -0.02 -0.4 0.12
0.15 -0.18 -0.43 -0.46 -0.67 -0.6 -0.57 -0.37 -0.06 0.23 0.24 0.44 1.33 1.03 0.31 1.09 -0.54 -0.79 0.18 -1.18 0.06 -0.74 0.31 0.44 0.34 -0.48 -1.82 -2.39 -0.12 -0.13 -0.31 0.01
-0.53 -0.17 0.04 -0.15 0.05 0.29 -0.0 -0.01 -0.42 -0.36 -0.41 -0.7 0.59 0.64 0.37 0.76 0.05 0.13 0.84 -0.86 -0.61 -0.39 0.49 0.63 -0.8 -0.55 -0.15 -0.02 -0.13 -0.08 -0.56 -0.37
-0.16 -0.11 -0.08 -0.15 0.06 0.01 -0.14 0.02 -0.03 -0.02 -0.14 -0.31 0.96 1.06 0.06 1.0 -0.43 -0.23 0.16 -1.81 -2.88 -3.43 0.72 0.88 -2.67 -0.22 -0.3 -0.52 -0.13 -0.06 0.27 0.34
-0.98 -0.44 -0.51 -0.4 -0.53 -0.54 -0.53 -0.7 -0.72 -0.71 -0.99 -0.9 0.97 1.11 0.56 1.63 -0.49 -0.12 0.66 -1.69 -0.2 -1.45 0.56 0.78 1.18 -0.7 -0.71 -0.67 -0.23 -0.06 -0.19 -0.15
-0.26 0.14 -0.11 -0.23 -0.19 -0.3 -0.28 -0.84 -0.5 -0.59 -0.59 -0.87 0.59 0.95 0.73 1.5 -0.49 0.22 1.25 -1.65 -1.37 -1.75 1.04 1.1 -1.61 -0.24 -0.62 -0.3 -0.33 -0.15 -1.33 -0.96
-0.36 -0.61 -0.53 -0.43 -0.35 -0.45 -0.72 -0.27 -0.25 -0.22 -0.25 -0.33 1.8 1.07 -0.7 1.13 -1.18 -0.92 -0.15 -1.24 -0.66 0.68 0.28 1.01 0.25 0.24 -0.34 -0.31 -0.58 -0.51 -0.49 -0.59
-0.14 -0.17 -0.48 -0.69 -0.89 -0.92 -0.32 -0.72 -0.21 -0.23 -0.04 -0.2 1.44 1.41 0.54 1.65 -1.44 -0.43 0.48 -2.97 -0.29 -3.35 0.78 0.97 -1.48 -1.05 -1.03 -1.11 -0.61 -0.38 0.09 0.42
-1.11 -1.14 -0.91 -0.4 -0.89 -0.76 -0.76 -0.77 -0.93 -0.83 -0.74 -0.96 -0.04 2.2 0.17 2.48 -1.02 -0.21 0.41 -5.93 -3.35 -4.59 1.45 1.71 -0.7 -1.21 -1.66 -1.76 -0.47 -0.51 -1.09 -0.7
-0.25 -0.23 -0.1 -0.11 0.13 -0.09 -0.31 -0.21 -0.34 -0.42 -0.37 -0.59 0.64 0.56 0.61 0.89 -0.19 -0.17 0.32 -1.82 -0.91 -0.23 0.32 0.5 0.17 0.11 0.18 0.05 -0.23 -0.13 -0.19 -0.02
-0.56 -0.65 -0.54 -0.47 -0.42 -0.67 -0.45 -0.22 -0.04 -0.06 -0.17 -0.65 1.99 1.68 0.57 1.23 -1.61 0.89 -0.74 -0.46 -2.14 -0.63 0.7 0.85 -0.39 -0.31 -1.06 -1.03 -1.42 -1.01 -1.77 -1.53
-0.16 -0.09 -0.07 0.1 -0.06 -0.2 -0.08 0.16 0.45 0.34 0.22 0.14 0.53 0.58 0.77 0.79 -0.35 -0.86 0.43 -0.77 -1.84 -3.83 0.26 0.35 0.18 0.44 -0.45 -0.47 0.01 -0.0 -0.91 -1.25
0.11 0.53 0.28 0.18 0.11 0.29 -0.44 -0.73 -0.35 -0.32 -0.06 -0.58 1.44 1.06 0.81 1.33 -0.27 -0.46 0.52 -1.5 -2.75 -3.21 0.23 0.37 -1.73 -0.96 -0.55 -0.83 -0.27 0.04 -0.7 -0.68
-0.41 -0.84 -1.35 -1.44 -0.99 -1.2 -1.01 -0.39 -0.17 -0.31 -0.12 -0.14 1.12 1.09 0.1 1.71 -1.85 -1.06 0.25 -0.63 -0.28 -3.75 -0.05 0.77 0.81 0.6 -0.69 -1.04 -0.79 -0.42 0.86 0.91
-0.33 -0.14 -0.14 0.05 -0.03 0.04 -0.05 -0.24 0.01 0.07 -0.17 -0.12 0.82 1.04 0.65 0.74 -0.11 -0.22 0.12 -0.59 -0.6 -0.78 0.46 0.66 0.08 -0.5 -1.21 -0.91 -0.05 0.09 -0.71 -0.94
-0.01 0.11 0.13 0.08 0.0 -0.02 -0.41 -0.24 -0.17 -0.12 -0.08 -0.05 1.36 1.04 0.49 1.27 -0.95 -1.61 -0.12 -3.36 -1.61 -3.94 0.45 1.17 -0.18 0.18 -0.76 -0.58 -0.44 -0.23 -0.53 -0.74
-0.03 -0.05 -0.42 -0.32 -0.29 -0.34 -0.28 -0.08 -0.1 0.09 0.04 0.14 1.11 0.73 0.26 0.69 -0.28 -0.63 0.62 -1.04 0.16 -3.51 0.3 0.48 0.33 -0.03 -0.8 -0.88 0.2 0.29 -0.62 -0.57
-0.09 -0.05 -0.06 -0.14 -0.5 -0.17 -0.29 -0.11 0.03 0.08 0.09 -0.03 0.69 0.65 0.44 0.64 -0.46 0.46 0.53 -0.22 -0.58 -0.47 0.76 0.78 -1.62 -0.79 -1.08 -1.15 -0.07 -0.11 -0.27 -0.1
-1.04 -0.51 -0.41 -0.49 -0.21 -0.26 -0.41 -0.61 -0.6 -0.75 -0.77 -1.02 0.42 0.97 0.92 1.66 -0.93 -0.27 0.85 -2.59 -2.4 -0.08 0.45 1.29 -0.19 0.02 0.19 0.58 -0.73 -0.18 -0.87 -0.42
-0.6 -0.51 -0.59 -0.46 -1.06 -1.42 -1.1 -0.62 -0.12 -0.18 -0.19 -0.85 2.36 1.48 0.15 1.76 -1.43 -1.11 0.2 - - - 0.03 0.27 -2.64 0.73 -0.77 -1.1 0.06 -0.09 0.09 0.59
0.09 -0.06 -0.27 0.03 -0.21 -0.2 -0.5 0.01 -0.05 -0.09 0.07 -0.09 1.33 1.15 0.06 1.22 -0.25 -0.65 0.27 -2.21 -1.72 -4.6 -0.15 0.08 -1.05 -0.14 -0.29 -0.59 -0.21 -0.28 0.81 0.22
-1.22 -2.92 -1.6 -0.49 -1.66 0.16 -0.27 -0.19 -0.06 -0.3 -1.01 -0.97 2.26 0.77 0.55 1.96 -1.74 -0.75 -1.22 -5.99 -3.88 -3.63 0.72 2.17 -1.46 -1.11 0.08 -1.05 -0.45 0.06 -1.18 -1.36
0.0 -0.25 -0.39 -0.46 -0.55 -0.05 -0.02 -0.28 0.13 0.15 0.04 -0.5 0.85 1.71 -0.03 1.62 -0.69 -0.01 -0.09 -4.0 -1.88 -2.81 0.55 0.58 -3.52 -0.33 -0.52 -0.91 -0.44 0.04 -0.1 0.41
-0.47 -0.79 -0.51 -0.63 -0.13 -0.44 -0.6 -0.3 -0.23 -0.28 -0.17 -0.4 0.92 0.52 0.73 1.02 -0.04 0.1 0.66 -1.08 -1.51 -2.23 0.59 1.03 -1.17 0.68 -0.07 -0.08 0.15 0.19 -0.38 -0.5
-2.58 -1.61 -2.33 -2.03 -1.3 -0.73 -1.42 -2.59 -1.17 -0.92 -3.57 -2.48 1.91 1.23 -0.75 2.41 -0.98 1.07 0.35 -2.92 -3.78 0.07 0.81 1.08 1.19 -0.14 -0.11 -1.3 -0.86 -0.07 -0.68 -0.74
-0.2 -0.55 -0.36 -0.25 -0.17 0.06 -0.4 0.1 -0.02 0.08 0.16 -0.18 0.92 0.4 0.83 1.22 -0.28 -0.27 0.53 -5.5 -2.67 -6.59 0.21 0.26 -0.04 0.28 -0.06 0.37 0.07 0.1 -0.23 -0.61
-0.32 -0.24 -0.11 -0.16 0.02 -0.02 -0.15 0.12 0.29 0.1 0.15 0.01 0.57 0.45 0.55 0.82 -0.37 0.48 0.45 -2.74 -1.32 -2.72 -0.09 0.18 -0.6 0.56 0.23 0.28 -0.14 -0.03 -0.69 -0.48
-0.95 -0.92 -0.86 -0.89 -0.71 -0.51 -0.72 -0.78 -0.7 -0.72 -0.68 -1.11 1.08 2.03 0.46 1.92 -0.5 0.67 0.23 -2.9 -0.51 -3.0 0.85 1.1 -3.19 -0.59 -0.81 -0.7 -0.08 0.02 -0.45 -0.6
-0.17 0.55 0.3 -0.17 -0.13 -0.38 -0.81 -0.51 -0.52 -0.26 -0.61 -0.5 1.01 1.94 -0.73 1.23 -0.51 -1.08 -0.11 0.8 -0.81 -1.61 0.24 0.27 0.22 -0.16 -0.55 -0.45 -0.79 -0.42 -0.89 -1.21
-0.84 -0.48 -0.69 -0.62 -0.16 -0.32 -0.48 -0.71 -0.28 -0.38 -0.4 -0.67 1.47 1.2 1.28 1.53 -1.31 -1.21 0.83 -2.83 -1.26 -1.47 0.76 1.24 0.28 -0.76 -0.69 -0.99 -0.69 -0.33 -0.94 -0.76
-0.41 0.02 0.17 0.15 0.13 0.7 -0.17 -0.43 -1.3 -0.51 -0.53 -1.33 1.14 1.2 -0.35 0.63 -0.1 0.03 0.9 -3.15 -0.19 -2.56 1.21 1.14 -0.57 -1.47 -0.67 -0.6 -0.83 -0.57 -0.71 -0.08
-0.41 -0.5 -0.29 -0.19 0.23 0.37 0.44 0.15 -0.67 -0.66 -0.87 -0.89 0.66 1.35 0.62 1.42 0.21 -0.81 0.16 -2.83 -2.02 -1.66 0.41 0.71 -0.77 -0.65 -0.16 -0.13 -0.04 0.05 0.01 -0.59
0.41 0.07 -0.17 -0.1 -0.03 -0.22 -0.38 -0.24 0.08 0.26 0.22 0.22 1.24 0.77 0.44 1.43 -0.47 -1.18 0.03 -5.68 -2.86 -7.76 0.29 0.56 -1.46 0.27 -0.65 -0.64 -0.05 -0.11 -0.13 -0.11
-0.44 -0.16 -0.23 -0.08 -0.11 -0.25 -0.15 -0.31 -0.29 -0.3 -0.45 -0.39 0.52 1.39 0.33 0.81 -0.34 -0.26 0.32 0.25 -0.3 -1.57 0.15 0.24 -0.2 0.13 0.02 -0.06 -0.35 -0.13 -0.11 -0.27
0.14 0.09 0.04 -0.08 0.19 0.16 -0.24 -0.07 -0.26 -0.24 -0.19 -0.36 0.97 0.77 0.38 1.3 -0.19 -0.05 0.25 -2.84 -2.15 -3.31 0.24 0.44 -0.86 0.03 -0.45 -0.24 -0.12 0.16 -0.07 -0.23
-0.56 -0.34 -0.22 -0.4 -0.48 -0.37 -0.57 -0.7 -0.44 -0.56 -0.38 -0.55 1.2 0.77 0.97 1.33 -0.14 -0.43 1.05 -0.94 -1.72 -0.94 0.73 1.03 -0.73 -0.05 -0.68 -0.46 -0.18 0.0 -0.71 -0.75
-0.47 -0.29 0.1 0.08 0.06 0.3 0.15 0.35 0.28 0.29 0.07 -0.02 1.3 1.04 0.06 0.88 -0.12 -0.27 -0.14 -4.81 -3.11 -3.17 0.48 0.26 -0.23 -0.36 -0.7 -0.87 0.06 -0.01 -0.45 -0.48
-0.23 -0.24 -0.17 -0.06 -0.23 -0.06 -0.02 -0.24 -0.1 -0.17 -0.18 -0.37 1.09 0.91 0.15 1.59 -0.42 -0.02 0.54 -1.33 -1.35 -3.21 0.16 0.94 0.28 -0.9 -0.81 -0.54 -0.36 0.1 -0.89 -0.52
-0.12 -0.61 0.08 -0.38 -0.01 -0.35 -0.26 -0.01 0.25 0.22 -0.17 -0.19 2.13 0.7 -0.7 1.49 -0.44 -0.24 0.29 -7.91 -6.78 -4.93 0.33 0.46 -2.98 -0.33 -0.78 -0.67 -0.21 -0.47 0.13 0.19
-1.03 -0.95 -0.75 -0.72 -0.47 -0.74 -1.54 -1.03 -1.29 -0.83 -0.85 -1.33 2.32 1.5 1.47 2.11 -3.41 -2.21 -2.29 -4.81 -0.92 -2.29 0.49 1.91 -0.52 -0.05 -0.68 -0.17 -1.82 -0.81 -2.86 -2.38
-0.14 0.01 -0.32 -0.31 -0.19 -0.3 -0.49 -0.97 -0.53 -0.72 -0.84 -1.01 1.05 1.33 0.23 1.61 -0.04 -0.48 0.81 -3.88 -3.19 -2.53 0.96 1.27 -1.32 -1.19 -0.14 -0.42 -0.12 -0.01 0.13 -0.36
0.44 -0.12 -0.17 -0.01 0.27 0.22 -0.21 -0.16 0.01 -0.04 -0.33 -0.15 1.2 1.22 0.74 1.15 -0.41 -0.33 0.5 -7.21 -3.35 -4.74 0.62 0.83 -3.62 -1.69 -0.98 -0.84 -0.05 0.09 -0.3 -0.33
-1.03 -0.95 -0.82 -0.47 -0.54 -0.02 0.06 0.0 -0.26 -0.3 -0.8 -0.76 1.55 0.01 1.21 0.78 -0.54 0.19 0.32 -1.29 -2.1 -2.79 0.35 0.76 0.5 -0.05 0.43 0.79 -0.1 0.13 -1.16 -1.18
-0.46 -0.29 -0.15 -0.38 -0.15 -0.06 -0.29 -0.36 -0.21 -0.2 -0.39 -0.65 1.76 1.15 0.63 1.52 -0.28 -0.43 0.24 -2.75 -4.87 -3.71 0.93 0.85 -1.61 -0.81 -0.86 -1.26 -0.07 0.19 -0.49 -0.31
-1.36 -1.77 -1.78 -1.49 -1.56 -0.63 -0.83 -0.97 -0.49 -0.39 -1.13 -1.21 2.18 1.12 1.02 2.0 -2.08 -1.16 -1.56 -6.12 -5.98 0.54 0.49 2.08 -0.7 -0.72 -0.02 0.05 -0.81 -0.39 -1.36 -1.41
-0.12 -0.27 -0.36 -0.32 -0.39 -0.43 -0.73 -0.33 0.01 -0.05 0.04 -0.13 1.29 0.8 0.74 1.01 -0.38 -0.83 0.78 -1.06 -0.6 -1.42 0.15 0.55 0.54 0.33 -1.06 -1.01 -0.03 -0.06 -0.8 -0.64
-0.6 -0.56 -0.35 -0.19 -0.08 -0.15 -0.04 0.09 0.04 0.02 -0.11 -0.37 1.76 1.18 0.28 1.07 -1.02 -0.85 0.09 -2.09 -1.37 -2.41 0.5 0.83 -0.24 0.06 -0.25 -0.33 -0.53 -0.44 -0.62 -0.56
-0.24 -0.79 -0.53 0.07 0.02 -0.17 -0.31 0.33 0.18 0.36 -0.12 -0.35 0.33 1.95 1.1 0.3 -1.11 -1.87 -0.52 -2.9 -6.01 -1.31 0.97 1.61 -0.8 -1.78 -1.0 -1.41 -0.53 -0.28 0.1 -0.13
-1.56 -1.15 -0.86 -0.73 -0.37 -0.31 -0.53 -0.63 -0.82 -0.81 -1.1 -1.25 1.48 0.46 0.76 1.48 -0.67 -0.28 0.52 -1.02 -1.99 -0.13 0.6 1.14 0.41 0.08 0.66 0.69 -0.6 -0.21 -0.96 -0.71
-1.85 -2.12 -2.45 -2.17 -1.73 -1.71 -1.35 -0.88 -0.71 -0.81 -1.16 -1.23 1.18 1.39 -0.03 2.22 -2.39 -0.2 0.45 0.7 1.03 -2.55 -1.59 -0.42 -1.22 0.87 0.59 -1.4 -0.44 -0.52 0.87 1.15
-0.65 -0.64 -0.84 -0.63 -0.6 -0.62 -0.66 -0.45 -0.54 -0.28 -0.59 -0.57 0.82 0.84 0.43 1.28 -0.64 -0.09 0.73 0.02 -0.16 -0.33 -0.29 0.25 1.29 -0.07 -0.19 -0.11 -0.3 -0.11 -0.39 -0.01
0.44 0.23 0.03 -0.05 0.06 0.0 -0.11 -0.01 -0.11 -0.01 -0.07 0.01 1.26 0.84 0.22 1.3 -0.99 -0.47 0.47 - - -0.34 0.1 0.31 -3.1 -0.03 -0.47 -0.45 -0.41 -0.37 -0.02 0.05

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.