Heatmap: Cluster_141 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.11 -0.32 -0.53 -0.28 -0.19 0.19 0.51 0.66 0.72 0.6 0.54 0.11 -0.28 -1.17 1.22 0.07 -0.52 -1.01 0.01 -4.1 -2.88 -1.42 -1.02 -1.05 -1.66 0.71 1.11 1.07 -0.34 -0.2 -0.17 -0.16
-0.12 -0.36 -0.2 -0.06 0.52 0.77 1.38 0.84 1.0 0.35 0.36 -0.16 -2.28 -1.57 0.59 -1.16 -0.39 -1.56 -0.26 - - - -0.56 -1.26 -3.84 -0.23 0.87 0.74 0.14 0.29 0.84 0.54
-0.24 -1.0 -0.73 -0.56 -0.2 0.95 0.98 1.32 0.77 0.59 -0.11 -0.02 -0.18 -0.28 1.77 0.49 -1.51 -0.66 -0.76 - -3.35 0.27 -1.24 -2.1 -1.1 -0.57 0.66 0.68 -0.2 0.0 -1.27 -1.75
-0.29 -0.11 -0.07 0.19 0.24 0.19 0.43 0.27 0.45 0.27 0.03 -0.09 0.13 -0.3 0.95 0.13 -0.14 -0.27 0.25 -0.71 -6.94 -2.15 0.1 0.03 -3.92 0.33 0.43 0.35 0.14 0.06 -0.07 -0.12
0.22 0.16 -0.1 0.03 0.21 0.38 0.38 0.51 0.13 0.15 0.17 0.04 -1.59 -0.85 1.07 -0.33 -0.61 -0.57 0.72 - -2.83 - -0.78 -0.74 - 0.43 1.48 1.38 -0.09 -0.08 -0.48 -0.31
0.04 -1.13 -0.38 0.23 0.4 0.89 1.05 0.75 0.56 0.76 0.24 -0.08 -1.69 -1.38 0.56 -1.32 -0.43 0.02 -0.67 - -1.26 - -0.77 -0.99 0.37 -0.64 0.89 1.37 -0.04 0.08 -0.14 -0.78
-1.53 -0.27 -1.51 -0.04 -0.63 1.27 1.02 0.98 1.0 0.54 -0.75 -0.89 -0.8 0.01 1.68 0.67 -0.5 -0.37 -0.05 - - - -0.46 -1.05 -1.53 -2.39 0.7 1.21 0.09 -0.26 -0.19 -0.82
-0.01 -0.12 -0.5 -0.17 0.41 0.62 1.07 0.79 0.66 0.37 0.53 -0.07 -0.96 -1.47 1.32 0.21 -0.17 -0.73 -0.03 -1.94 -3.32 -5.65 -0.32 -0.62 -2.39 -0.89 0.35 0.54 0.32 0.26 -0.13 -0.21
-0.18 -0.11 -0.14 0.21 0.29 0.4 0.43 0.4 0.22 0.06 -0.23 -0.4 -0.18 -0.13 0.31 -0.05 -0.13 -0.25 0.33 -3.47 -0.68 -2.68 -0.16 -0.14 -0.33 0.59 1.04 1.09 -0.25 -0.19 -0.71 -0.7
-0.09 0.21 0.32 0.37 0.51 0.81 0.69 0.68 0.45 0.13 0.14 -0.2 -1.79 -1.03 0.63 -1.37 0.09 -0.34 -0.26 -1.95 -3.18 -1.73 -0.14 -0.37 0.01 -0.24 0.86 1.0 0.2 0.21 -1.03 -1.6
-0.66 -0.68 -0.44 -0.27 0.38 0.35 0.56 0.57 0.16 -0.07 -0.31 -0.47 -0.04 -0.91 0.95 0.23 0.04 -0.48 0.35 -2.0 -2.66 -1.69 0.03 0.26 -0.54 0.36 0.84 1.16 0.42 0.53 -1.23 -1.89
-0.23 -0.36 -0.47 0.1 0.45 0.57 0.66 0.89 0.78 0.17 0.45 0.02 -3.55 -1.82 0.62 -2.42 0.14 -0.2 -0.59 - -4.86 -0.9 -0.82 -1.08 -1.12 0.49 1.46 1.31 0.1 0.04 -0.21 -0.6
0.01 -0.42 -0.99 0.11 0.59 0.96 1.01 0.55 0.81 0.48 0.1 -0.5 -1.7 -0.84 0.49 -0.89 -0.28 0.22 -0.33 - -4.97 - -0.42 -1.2 -1.71 -0.73 1.3 1.35 -0.11 0.11 0.31 -0.25
-0.99 -1.12 -1.53 -0.58 -0.38 0.87 1.12 0.77 0.86 0.81 0.05 -0.46 -1.5 -1.65 1.42 -1.02 0.38 -0.45 -0.12 - - - -0.17 -0.73 - -0.78 -0.16 0.67 0.62 0.83 0.96 0.67
-0.3 -0.35 -0.1 0.12 0.36 0.49 1.26 0.84 0.6 0.3 0.03 -0.32 -0.51 -0.63 1.12 -0.59 -0.18 -0.72 0.15 - -4.31 - -0.15 -0.42 - -0.29 0.75 0.73 0.17 0.57 0.2 -0.87
-0.73 -0.29 -0.36 0.11 0.39 0.44 0.46 0.7 0.41 0.21 -0.09 -0.45 -0.08 -0.69 0.35 0.35 -0.42 -0.84 0.72 -2.21 -3.18 -2.34 -0.06 0.13 -0.23 0.72 0.91 0.78 -0.04 0.21 -0.92 -0.97
-0.09 -0.17 0.04 0.26 0.23 0.37 0.47 0.5 0.48 0.42 0.35 0.08 0.1 -0.53 0.83 0.08 -0.36 -0.36 0.0 -1.67 -0.76 -0.5 -0.06 0.31 -0.5 -0.11 -0.19 -0.53 -0.38 -0.14 -0.35 -0.03
-0.44 -0.03 0.16 0.28 0.22 1.17 0.88 0.74 0.56 0.12 -0.39 -0.3 -0.79 -0.1 0.97 0.15 -0.28 0.01 -0.09 -1.27 -4.81 - 0.04 -0.43 -1.83 0.01 0.57 0.7 -0.66 -0.35 -0.64 -0.19
-0.17 -0.58 -0.9 -0.51 0.38 0.64 1.13 0.86 0.54 0.73 0.13 0.05 -1.38 -0.1 0.73 -0.3 -0.56 -0.06 0.19 -1.3 -2.85 -2.46 -0.15 -0.34 -3.18 -0.11 0.16 -0.14 0.29 -0.18 0.63 0.49
-0.16 -0.12 -0.64 -0.07 0.15 0.52 0.71 0.64 0.56 0.29 -0.1 -0.1 -0.14 -0.9 0.37 -0.22 -0.36 -1.51 0.45 -0.45 -0.64 -2.81 0.18 0.27 -0.23 0.07 0.65 0.64 -0.14 -0.1 -0.48 -0.42
-0.54 -0.39 -0.48 -0.14 0.76 0.46 0.53 0.93 0.65 0.19 -0.07 -0.2 0.01 -1.08 1.05 0.53 -0.79 -1.28 0.79 -1.69 -3.02 -4.29 -0.49 -0.32 -1.79 0.58 0.84 0.8 -0.08 0.13 -1.37 -0.87
0.1 0.04 0.02 0.37 0.54 0.81 0.4 0.61 0.34 0.59 0.29 -0.13 -0.98 -0.93 0.58 -0.98 -0.25 -1.98 -0.45 -3.6 -6.57 -2.66 0.24 -0.27 -0.19 0.52 1.22 1.15 -0.37 -0.4 -0.99 -0.68
-0.31 0.03 0.12 0.2 0.5 0.49 0.56 0.55 0.18 0.08 -0.08 -0.2 -0.46 -1.06 0.2 -0.21 -0.14 -0.34 0.52 -2.04 -2.2 -4.51 0.17 0.19 -0.16 0.31 0.85 0.7 0.04 0.19 -0.62 -0.58
-0.56 -0.4 -0.23 -0.05 0.54 0.61 0.64 0.65 0.22 0.06 -0.27 -0.43 0.09 -1.16 0.53 0.04 -0.46 -0.75 0.55 -0.91 -3.68 -3.03 0.12 0.21 -1.69 0.62 1.12 1.23 -0.12 0.11 -1.56 -1.31
-0.38 -0.18 -0.14 -0.14 0.23 -0.1 0.04 0.04 0.13 0.11 0.4 0.17 0.3 0.11 1.1 0.11 -0.54 -0.15 0.32 -0.79 -1.61 - -0.06 0.38 -1.01 0.78 0.57 0.48 -0.41 -0.18 -0.98 -0.05
-0.16 -0.17 0.04 0.34 0.31 0.64 0.66 0.69 0.54 0.38 -0.05 -0.18 0.16 -0.47 1.0 0.1 -0.14 -0.9 0.25 -1.29 - - 0.09 0.34 -1.02 -0.33 0.38 0.07 -0.16 0.24 -0.65 -0.53
-1.59 -0.95 -0.38 -0.06 0.69 0.87 1.03 0.88 0.02 -0.29 -0.9 -1.41 -0.47 -1.66 1.42 -0.53 0.04 0.15 0.13 -3.05 -5.08 -3.84 0.22 0.42 -1.63 -0.35 1.19 1.29 -0.24 0.06 -0.67 -0.61
-0.62 0.04 -0.01 0.08 0.3 0.59 0.81 0.82 0.74 0.43 0.15 -0.09 -0.61 -1.4 1.37 -0.64 -0.64 0.25 0.08 -0.69 - - -0.19 -0.41 -5.25 -0.42 0.75 0.61 -0.17 0.03 -0.62 0.02
0.15 0.11 0.35 0.42 0.75 0.78 0.68 0.38 0.3 -0.04 0.14 -0.23 -0.36 -0.13 0.66 -0.27 0.06 -0.54 -0.04 -5.33 - -1.77 0.21 0.05 -1.29 -0.34 0.76 0.57 -0.13 0.01 -0.95 -0.74
-0.25 -0.25 -0.14 0.24 0.4 0.18 0.55 0.39 0.38 0.35 0.04 0.06 -0.79 0.02 1.08 -0.23 0.08 -0.14 -0.28 -1.35 -0.83 0.01 -0.36 -0.7 -1.43 -0.11 0.46 0.33 -0.27 -0.1 0.05 -0.13
-0.51 -0.57 -0.54 -0.39 0.21 0.3 0.77 0.76 0.52 0.27 0.14 -0.14 -1.78 -1.79 1.39 -1.1 -0.29 -0.02 0.19 -4.34 -6.91 - 0.29 -0.27 -3.24 0.64 1.49 1.34 -0.41 0.04 -0.76 -0.63
-0.54 -0.51 -0.03 0.18 0.33 0.18 0.66 0.56 0.63 0.43 0.47 0.09 -1.08 -0.58 0.82 -0.96 0.1 0.04 -0.14 -4.68 -5.42 -3.87 -0.5 -0.76 -2.95 0.44 1.29 1.08 -0.31 -0.28 0.07 0.2
-0.34 -0.34 -0.19 0.27 0.35 0.18 0.65 0.75 0.55 0.57 0.36 -0.11 0.3 -0.21 0.75 0.24 -0.5 -0.76 0.19 -4.82 -3.39 -0.03 -0.15 -0.23 -1.24 0.22 0.45 0.33 -0.37 -0.15 -0.71 -0.39
-0.62 -0.39 -0.27 0.2 0.51 0.62 0.84 0.86 0.41 0.41 -0.03 -0.29 -0.38 -1.37 0.24 -0.28 -0.09 -0.48 -0.02 -5.3 -3.33 -5.12 0.17 0.27 -2.92 0.9 1.08 1.17 0.1 0.03 -1.13 -1.32
-0.5 -0.02 0.18 0.3 0.76 1.07 0.92 0.63 0.25 -0.07 -0.47 -0.63 -1.02 -2.73 1.18 -0.49 0.02 -0.32 0.3 -2.02 -3.1 -1.38 -0.33 -0.4 -1.44 -0.46 1.04 1.22 0.03 0.26 -1.9 -1.92
-0.03 -0.15 -0.11 0.02 -0.42 -0.08 0.28 0.56 0.39 0.47 0.43 0.18 -0.4 0.05 0.83 -0.17 -0.69 -1.68 0.11 -3.92 - -1.98 -0.34 -0.49 -1.46 0.69 1.34 1.31 0.07 0.12 -0.7 -0.76
-0.16 -0.66 -0.53 -0.08 0.75 0.98 1.05 0.92 0.96 0.92 0.11 -0.11 -1.57 -2.15 0.64 -1.22 -0.22 -0.28 -0.39 -0.04 -3.39 -4.74 -0.37 -0.7 -1.38 -0.36 0.52 0.47 0.05 0.05 0.04 -0.28
-0.7 -0.22 -0.57 0.02 0.36 0.25 0.08 0.38 0.44 0.15 0.2 -0.48 0.16 -0.82 1.37 0.24 -0.51 -0.4 0.57 -0.87 -6.12 -2.97 -0.09 0.14 -1.07 0.57 0.68 0.75 -0.34 0.11 -0.62 -0.32
0.46 0.74 0.18 0.39 0.31 0.57 0.65 0.57 0.51 0.62 0.45 -0.02 -1.17 -0.7 0.95 -0.47 0.24 -0.78 -0.03 -2.04 - -2.5 -0.57 -0.91 -2.5 -0.42 0.61 0.35 -0.04 -0.29 -0.33 0.03
-0.38 -0.25 -0.1 0.11 0.41 0.42 0.62 0.63 0.24 0.28 -0.03 -0.32 -0.05 -1.47 0.42 0.23 -0.07 -1.31 0.66 -3.8 - - 0.2 0.14 -3.03 0.85 0.87 0.94 0.15 0.06 -0.54 -0.23
-0.64 -0.42 -0.52 -0.32 0.21 0.63 0.49 0.8 0.73 0.19 0.12 -0.26 0.21 -0.65 1.74 0.46 -0.61 -0.38 0.35 - -5.28 - -0.16 0.5 -1.93 0.48 0.44 0.01 -0.33 -0.06 -1.11 -0.4
-0.04 0.12 -0.18 0.15 0.77 0.95 1.12 0.91 0.82 0.57 0.22 0.01 -1.44 -0.38 0.7 -0.89 -0.49 -0.78 -0.69 -0.76 -1.72 -2.81 -0.89 -1.15 -0.06 -0.66 0.63 0.63 -0.56 -0.52 -0.15 -0.66
-0.15 -0.01 0.28 0.24 0.41 0.65 0.76 0.68 0.19 0.14 -0.02 -0.29 -0.4 -0.62 1.18 -0.02 -0.06 -0.37 0.44 -3.54 - -2.51 -0.16 -0.21 -1.7 -0.43 0.43 0.89 0.01 -0.08 -0.14 -0.75
-0.03 -0.59 -0.32 0.15 0.57 0.98 1.13 1.02 0.89 0.66 0.43 -0.14 -0.63 -0.95 0.58 -0.81 -0.14 0.28 -0.16 -3.54 -2.58 -4.91 -0.16 -0.2 -1.62 -0.34 0.13 0.41 0.0 0.23 -0.75 -1.05
-0.29 0.36 0.06 0.09 0.18 0.97 0.88 0.7 0.23 0.08 -0.44 -0.58 -0.19 -1.61 0.39 -0.02 -0.06 -0.12 0.53 -0.77 - -2.37 -0.29 -0.23 -0.96 0.09 1.0 0.58 0.3 0.42 -1.78 -1.38
-0.91 -0.74 -0.44 -0.26 0.56 0.61 0.81 0.75 0.3 -0.02 -0.47 -0.83 -0.22 -1.35 1.75 -0.31 -0.41 0.06 0.39 -3.04 -5.2 -5.26 -0.07 0.47 -2.46 -0.28 0.78 0.47 -0.31 -0.25 0.27 0.44
-0.36 0.33 0.33 0.37 0.63 0.93 0.68 0.26 0.25 0.24 -0.08 -0.37 -0.1 -0.27 0.5 -0.2 -0.19 0.1 -0.5 -1.49 -2.57 -1.88 0.37 0.08 -1.49 -0.55 0.75 0.77 -0.26 0.13 -1.39 -1.09
-0.31 0.2 0.38 0.34 0.52 0.69 0.8 0.52 0.45 0.23 -0.05 -0.19 -0.36 -0.5 0.68 -0.59 0.1 -0.16 -0.15 -3.29 -2.3 -3.88 0.17 0.15 -2.12 -0.64 0.69 1.1 -0.0 0.12 -1.02 -1.16
-0.25 -0.27 -0.11 0.02 0.51 0.75 0.99 0.87 0.67 0.5 0.1 -0.17 -0.79 -0.92 0.45 -1.11 -0.33 -0.53 -0.61 -4.76 -2.46 -5.24 -0.17 -0.64 0.42 -0.43 1.12 1.05 -0.18 -0.04 -0.39 -0.48
-0.93 -1.51 -2.97 -1.3 0.07 0.63 1.14 1.23 0.59 1.02 -0.47 -0.54 -0.35 -0.81 1.88 -0.44 -0.28 -0.49 -0.83 -2.98 -1.95 -0.3 -0.48 -1.48 -2.81 -0.01 0.96 0.87 -0.52 -0.36 -0.01 -0.02
-0.1 -0.06 0.06 0.2 0.83 0.72 0.9 0.93 0.87 0.57 0.04 -0.04 -0.29 -0.81 1.31 -0.39 -0.39 -0.04 -0.02 -6.86 -4.62 -2.18 0.11 0.1 -2.57 -1.04 0.11 0.43 -0.43 -0.24 -1.28 -0.86
-0.96 -0.91 -0.15 -0.17 0.52 0.7 0.69 0.8 0.86 0.57 -0.23 -0.36 -0.31 -1.86 0.48 -0.31 -0.58 -0.85 0.27 - - -1.65 -0.08 -0.13 -5.16 1.3 1.12 1.28 -0.39 -0.4 -0.8 -0.44
-0.11 -0.23 -0.3 0.04 0.51 0.97 1.01 0.83 0.63 0.45 0.09 0.01 -1.69 -0.27 0.75 -0.96 -0.57 -0.81 -0.72 -3.27 -1.77 -1.04 -0.97 -1.37 -0.01 -0.09 1.29 1.16 -0.79 -0.59 -0.32 -0.77
-0.43 -0.27 0.2 0.06 0.82 0.35 0.49 0.27 -0.11 -0.16 -0.01 -0.52 0.09 -0.69 0.69 0.24 -0.11 -0.09 0.33 -3.48 -3.09 -0.65 0.31 0.46 -1.61 0.25 0.83 0.75 -0.19 0.05 -1.17 -0.58
-0.71 0.03 -0.06 0.31 0.56 0.39 0.62 0.66 0.3 0.02 -0.58 -0.83 -0.27 -0.66 0.73 -0.04 -0.11 -0.55 0.5 -6.56 -3.51 -3.11 0.03 0.14 -0.98 0.1 1.36 1.23 -0.06 0.18 -1.45 -1.42
-0.34 -0.03 0.03 0.17 0.57 0.34 0.31 0.53 0.32 0.33 0.25 -0.11 0.01 -1.4 0.65 0.46 -0.36 -1.26 0.79 -5.71 - -2.49 0.5 0.58 -2.51 0.63 0.65 0.34 -0.06 0.18 -0.9 -1.08

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.